FFCP PHASE1:Hg19::chr3:123512832..123512846,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4638 | |EntrezGene=4638 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7590 | |HGNC=7590 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-98bp_to_ENST00000510571_5end | |association_with_transcript=-98bp_to_ENST00000510571_5end | ||
|cluster_id=chr3:123512832..123512846,- | |||
|coexpression_cluster_id=C495 | |coexpression_cluster_id=C495 | ||
|description=CAGE_peak_46_at_MYLK_5end | |description=CAGE_peak_46_at_MYLK_5end | ||
|id=chr3:123512832..123512846,- | |id=chr3:123512832..123512846,- | ||
|ontology_enrichment_celltype=CL:0002537!2.52e-22!5;CL:0002536!7.37e-10!2;CL:0000077!1.14e-07!19 | |ontology_enrichment_celltype=CL:0002537!2.52e-22!5;CL:0002536!7.37e-10!2;CL:0000077!1.14e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0002537;6.82e-45;5!CL:0000349;3.26e-21;19!CL:0002536;1.21e-13;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,6.33e-45,5;CL:0000349,3.02e-21,19;CL:0002536,1.07e-13,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;3.15e-26;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.28e-35!14;UBERON:0000158!1.28e-35!14;UBERON:0000305!1.95e-30!7;UBERON:0004871!1.66e-26!8;UBERON:0003076!3.10e-21!15;UBERON:0003057!3.10e-21!15;UBERON:0000478!8.80e-20!24;UBERON:0002298!1.15e-18!8;UBERON:0001049!2.37e-16!57;UBERON:0005068!2.37e-16!57;UBERON:0006241!2.37e-16!57;UBERON:0007135!2.37e-16!57;UBERON:0001017!1.60e-14!82;UBERON:0001896!7.08e-14!3;UBERON:0005290!7.08e-14!3;UBERON:0010096!7.08e-14!3;UBERON:0005743!1.19e-13!86;UBERON:0004121!2.13e-13!169;UBERON:0002240!3.83e-13!3;UBERON:0000988!5.56e-13!3;UBERON:0000924!6.10e-13!173;UBERON:0006601!6.10e-13!173;UBERON:0000955!1.77e-12!69;UBERON:0006238!1.77e-12!69;UBERON:0004733!3.14e-12!12;UBERON:0002028!3.14e-12!12;UBERON:0007277!3.14e-12!12;UBERON:0000073!5.86e-12!94;UBERON:0001016!5.86e-12!94;UBERON:0004732!3.08e-11!13;UBERON:0003075!5.75e-11!86;UBERON:0007284!5.75e-11!86;UBERON:0002346!2.62e-10!90;UBERON:0002616!3.37e-10!59;UBERON:0003124!6.77e-10!7;UBERON:0002148!2.23e-09!2;UBERON:0009662!2.23e-09!2;UBERON:0004923!2.22e-08!57;UBERON:0007023!2.44e-08!115;UBERON:0005174!4.61e-08!5;UBERON:0001137!4.61e-08!5;UBERON:0002308!2.40e-07!9;UBERON:0000125!2.40e-07!9 | |ontology_enrichment_uberon=UBERON:0005631!1.28e-35!14;UBERON:0000158!1.28e-35!14;UBERON:0000305!1.95e-30!7;UBERON:0004871!1.66e-26!8;UBERON:0003076!3.10e-21!15;UBERON:0003057!3.10e-21!15;UBERON:0000478!8.80e-20!24;UBERON:0002298!1.15e-18!8;UBERON:0001049!2.37e-16!57;UBERON:0005068!2.37e-16!57;UBERON:0006241!2.37e-16!57;UBERON:0007135!2.37e-16!57;UBERON:0001017!1.60e-14!82;UBERON:0001896!7.08e-14!3;UBERON:0005290!7.08e-14!3;UBERON:0010096!7.08e-14!3;UBERON:0005743!1.19e-13!86;UBERON:0004121!2.13e-13!169;UBERON:0002240!3.83e-13!3;UBERON:0000988!5.56e-13!3;UBERON:0000924!6.10e-13!173;UBERON:0006601!6.10e-13!173;UBERON:0000955!1.77e-12!69;UBERON:0006238!1.77e-12!69;UBERON:0004733!3.14e-12!12;UBERON:0002028!3.14e-12!12;UBERON:0007277!3.14e-12!12;UBERON:0000073!5.86e-12!94;UBERON:0001016!5.86e-12!94;UBERON:0004732!3.08e-11!13;UBERON:0003075!5.75e-11!86;UBERON:0007284!5.75e-11!86;UBERON:0002346!2.62e-10!90;UBERON:0002616!3.37e-10!59;UBERON:0003124!6.77e-10!7;UBERON:0002148!2.23e-09!2;UBERON:0009662!2.23e-09!2;UBERON:0004923!2.22e-08!57;UBERON:0007023!2.44e-08!115;UBERON:0005174!4.61e-08!5;UBERON:0001137!4.61e-08!5;UBERON:0002308!2.40e-07!9;UBERON:0000125!2.40e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0000305;2.01e-56;7!UBERON:0005631;1.01e-39;10!UBERON:0000158;1.01e-39;10!UBERON:0000478;5.78e-26;24!UBERON:0001896;1.53e-09;3!UBERON:0005290;1.53e-09;3!UBERON:0001987;1.44e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,1.63e-56,7;UBERON:0004871,1.50e-49,8;UBERON:0005631,3.35e-44,14;UBERON:0000158,3.35e-44,14;UBERON:0000478,5.49e-26,24;UBERON:0004923,1.22e-09,66;UBERON:0001896,1.54e-09,3;UBERON:0005290,1.54e-09,3;UBERON:0010096,1.54e-09,3;UBERON:0001987,1.49e-07,4;UBERON:0004340,1.49e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.31064823278103,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604780586659361,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86493381685228,0.890894042497916,1.53580351049616,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.337005664903385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,0.443716206147409,0.807253238237985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,1.07453304648892,29.9537403746143,0.657852148736121,0,0,0,0,0,0.607719912354764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,2.7497734750418,0,0,0.135939465953663,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.31064823278103,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604780586659361,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86493381685228,0.890894042497916,1.53580351049616,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.337005664903385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,0.443716206147409,0.807253238237985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,1.07453304648892,29.9537403746143,0.657852148736121,0,0,0,0,0,0.607719912354764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,2.7497734750418,0,0,0.135939465953663,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p46@MYLK | |short_description=p46@MYLK | ||
}} | }} |
Latest revision as of 01:52, 20 September 2015
Short description: | p46@MYLK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_46_at_MYLK_5end |
Coexpression cluster: | C495_mesothelioma_Preadipocyte_Smooth_Multipotent_Placental_Sertoli_Adipocyte |
Association with transcript: | -98bp_to_ENST00000510571_5end |
EntrezGene: | MYLK |
HGNC: | 7590 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 6.33e-45 | 5 |
extraembryonic cell | 3.02e-21 | 19 |
amniotic epithelial cell | 1.07e-13 | 2 |
Ontology term | p-value | n |
---|---|---|
amnion | 1.63e-56 | 7 |
somatic layer of lateral plate mesoderm | 1.50e-49 | 8 |
extraembryonic membrane | 3.35e-44 | 14 |
membranous layer | 3.35e-44 | 14 |
extraembryonic structure | 5.49e-26 | 24 |
organ component layer | 1.22e-09 | 66 |
medulla oblongata | 1.54e-09 | 3 |
myelencephalon | 1.54e-09 | 3 |
future myelencephalon | 1.54e-09 | 3 |
placenta | 1.49e-07 | 4 |
allantois | 1.49e-07 | 4 |