FFCP PHASE1:Hg19::chr10:96443542..96443563,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1562 | |EntrezGene=1562 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2620 | |HGNC=2620 | ||
|TSSclassifier=strong | |||
|UniProt=P33260 | |UniProt=P33260 | ||
|association_with_transcript=164bp_to_ENST00000285979_5end | |association_with_transcript=164bp_to_ENST00000285979_5end | ||
|cluster_id=chr10:96443542..96443563,+ | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_1_at_CYP2C18_5end | |description=CAGE_peak_1_at_CYP2C18_5end | ||
|id=chr10:96443542..96443563,+ | |id=chr10:96443542..96443563,+ | ||
|ontology_enrichment_celltype=CL:0002623!9.55e-07!3 | |ontology_enrichment_celltype=CL:0002623!9.55e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002623;6.99e-11;3!CL:0000622;7.18e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,7.36e-11,3;CL:0000622,7.40e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0009143;3.31e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004921!1.96e-12!129;UBERON:0004185!1.96e-12!129;UBERON:0004119!2.33e-12!169;UBERON:0000925!2.33e-12!169;UBERON:0006595!2.33e-12!169;UBERON:0001007!1.52e-10!155;UBERON:0001555!1.52e-10!155;UBERON:0007026!1.52e-10!155;UBERON:0000341!1.01e-09!2;UBERON:0003127!1.77e-09!2;UBERON:0001041!6.70e-09!98;UBERON:0001042!3.98e-07!10;UBERON:0009145!3.98e-07!10;UBERON:0001723!6.55e-07!3;UBERON:0001033!6.55e-07!3;UBERON:0010056!6.55e-07!3;UBERON:0005409!7.90e-07!35 | |ontology_enrichment_uberon=UBERON:0004921!1.96e-12!129;UBERON:0004185!1.96e-12!129;UBERON:0004119!2.33e-12!169;UBERON:0000925!2.33e-12!169;UBERON:0006595!2.33e-12!169;UBERON:0001007!1.52e-10!155;UBERON:0001555!1.52e-10!155;UBERON:0007026!1.52e-10!155;UBERON:0000341!1.01e-09!2;UBERON:0003127!1.77e-09!2;UBERON:0001041!6.70e-09!98;UBERON:0001042!3.98e-07!10;UBERON:0009145!3.98e-07!10;UBERON:0001723!6.55e-07!3;UBERON:0001033!6.55e-07!3;UBERON:0010056!6.55e-07!3;UBERON:0005409!7.90e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;9.24e-22;33!UBERON:0005409;4.17e-16;22!UBERON:0002108;4.12e-15;4!UBERON:0001041;1.90e-13;14!UBERON:0001555;8.69e-12;54!UBERON:0001723;3.69e-11;3!UBERON:0001033;3.69e-11;3!UBERON:0000160;4.89e-11;17!UBERON:0001007;6.65e-10;81!UBERON:0002372;3.31e-09;1!UBERON:0001961;3.31e-09;1!UBERON:0001744;3.31e-09;1!UBERON:0001042;3.31e-09;1!UBERON:0001735;3.31e-09;1!UBERON:0005795;8.82e-09;1!UBERON:0002365;1.27e-08;31!UBERON:0002330;1.27e-08;31!UBERON:0000945;4.85e-07;5!UBERON:0010039;4.85e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,1.23e-15,118;UBERON:0002108,4.12e-15,4;UBERON:0005409,3.64e-14,25;UBERON:0001007,3.65e-12,145;UBERON:0001555,3.65e-12,145;UBERON:0007026,3.65e-12,145;UBERON:0001723,3.79e-11,3;UBERON:0001033,3.79e-11,3;UBERON:0010056,3.79e-11,3;UBERON:0000160,4.89e-11,17;UBERON:0004119,9.78e-11,160;UBERON:0000925,9.78e-11,160;UBERON:0006595,9.78e-11,160;UBERON:0001041,1.72e-10,87;UBERON:0002372,4.19e-09,1;UBERON:0001961,4.19e-09,1;UBERON:0001744,4.19e-09,1;UBERON:0001735,4.19e-09,1;UBERON:0011216,7.66e-09,223;UBERON:0000166,1.84e-08,22;UBERON:0002365,2.41e-08,31;UBERON:0002330,2.41e-08,31;UBERON:0001042,1.88e-07,10;UBERON:0009145,1.88e-07,10;UBERON:0006562,8.14e-07,11 | |||
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| ||
|short_description=p1@CYP2C18 | |short_description=p1@CYP2C18 | ||
}} | }} |
Latest revision as of 02:33, 20 September 2015
Short description: | p1@CYP2C18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CYP2C18_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 164bp_to_ENST00000285979_5end |
EntrezGene: | CYP2C18 |
HGNC: | 2620 |
UniProt: | P33260 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 7.36e-11 | 3 |
acinar cell | 7.40e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 1.23e-15 | 118 |
small intestine | 4.12e-15 | 4 |
gastrointestinal system | 3.64e-14 | 25 |
digestive system | 3.65e-12 | 145 |
digestive tract | 3.65e-12 | 145 |
primitive gut | 3.65e-12 | 145 |
tongue | 3.79e-11 | 3 |
gustatory system | 3.79e-11 | 3 |
future tongue | 3.79e-11 | 3 |
intestine | 4.89e-11 | 17 |
endoderm-derived structure | 9.78e-11 | 160 |
endoderm | 9.78e-11 | 160 |
presumptive endoderm | 9.78e-11 | 160 |
foregut | 1.72e-10 | 87 |
tonsil | 4.19e-09 | 1 |
mucosa-associated lymphoid tissue | 4.19e-09 | 1 |
lymphoid tissue | 4.19e-09 | 1 |
tonsillar ring | 4.19e-09 | 1 |
organ system subdivision | 7.66e-09 | 223 |
oral opening | 1.84e-08 | 22 |
exocrine gland | 2.41e-08 | 31 |
exocrine system | 2.41e-08 | 31 |
chordate pharynx | 1.88e-07 | 10 |
pharyngeal region of foregut | 1.88e-07 | 10 |
pharynx | 8.14e-07 | 11 |