FFCP PHASE1:Hg19::chr3:124355991..124356002,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8997 | |EntrezGene=8997 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4814 | |HGNC=4814 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-7bp_to_uc011bjz.1_5end | |association_with_transcript=-7bp_to_uc011bjz.1_5end | ||
|cluster_id=chr3:124355991..124356002,+ | |||
|coexpression_cluster_id=C190 | |coexpression_cluster_id=C190 | ||
|description=CAGE_peak_32_at_KALRN_5end | |description=CAGE_peak_32_at_KALRN_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;5.97e-34;1 | |ontology_enrichment_development_v019=UBERON:0006242;5.97e-34;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.30e-12!27;UBERON:0005409!3.22e-09!35;UBERON:0002134!9.46e-09!1;UBERON:0005208!9.46e-09!1;UBERON:0005946!9.46e-09!1;UBERON:0005965!9.46e-09!1;UBERON:0002078!9.46e-09!1;UBERON:0001154!1.48e-08!1;UBERON:0001153!1.48e-08!1;UBERON:0001301!1.98e-08!1;UBERON:0007190!3.28e-08!1;UBERON:0002336!3.53e-08!1;UBERON:0001018!3.53e-08!1;UBERON:0002473!3.53e-08!1;UBERON:0005340!3.53e-08!1;UBERON:0002316!3.53e-08!1;UBERON:0003544!3.53e-08!1;UBERON:0001020!3.53e-08!1;UBERON:0005970!3.53e-08!1;UBERON:0002437!3.53e-08!1;UBERON:0002022!4.07e-08!1;UBERON:0001155!6.29e-08!9;UBERON:0007023!9.19e-07!115;UBERON:0001893!9.66e-07!34 | |ontology_enrichment_uberon=UBERON:0000160!4.30e-12!27;UBERON:0005409!3.22e-09!35;UBERON:0002134!9.46e-09!1;UBERON:0005208!9.46e-09!1;UBERON:0005946!9.46e-09!1;UBERON:0005965!9.46e-09!1;UBERON:0002078!9.46e-09!1;UBERON:0001154!1.48e-08!1;UBERON:0001153!1.48e-08!1;UBERON:0001301!1.98e-08!1;UBERON:0007190!3.28e-08!1;UBERON:0002336!3.53e-08!1;UBERON:0001018!3.53e-08!1;UBERON:0002473!3.53e-08!1;UBERON:0005340!3.53e-08!1;UBERON:0002316!3.53e-08!1;UBERON:0003544!3.53e-08!1;UBERON:0001020!3.53e-08!1;UBERON:0005970!3.53e-08!1;UBERON:0002437!3.53e-08!1;UBERON:0002022!4.07e-08!1;UBERON:0001155!6.29e-08!9;UBERON:0007023!9.19e-07!115;UBERON:0001893!9.66e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.65e-59;4!UBERON:0000160;7.91e-30;17!UBERON:0005409;1.64e-23;22!UBERON:0004921;1.90e-14;33!UBERON:0002110;2.74e-12;3!UBERON:0002114;2.74e-12;2!UBERON:0000922;5.60e-09;49!UBERON:0001555;2.23e-07;54 | |ontology_enrichment_uberon_v019=UBERON:0002108;1.65e-59;4!UBERON:0000160;7.91e-30;17!UBERON:0005409;1.64e-23;22!UBERON:0004921;1.90e-14;33!UBERON:0002110;2.74e-12;3!UBERON:0002114;2.74e-12;2!UBERON:0000922;5.60e-09;49!UBERON:0001555;2.23e-07;54 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.65e-59,4;UBERON:0000160,7.91e-30,17;UBERON:0005409,6.97e-21,25;UBERON:0002110,2.59e-12,3;UBERON:0006242,2.59e-12,3;UBERON:0002114,3.24e-12,2 | |||
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|short_description=p32@KALRN | |short_description=p32@KALRN | ||
}} | }} |
Latest revision as of 02:33, 20 September 2015
Short description: | p32@KALRN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_32_at_KALRN_5end |
Coexpression cluster: | C190_colon_small_rectum_duodenum_appendix_temporal_oral |
Association with transcript: | -7bp_to_uc011bjz.1_5end |
EntrezGene: | KALRN |
HGNC: | 4814 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
small intestine | 1.65e-59 | 4 |
intestine | 7.91e-30 | 17 |
gastrointestinal system | 6.97e-21 | 25 |
gallbladder | 2.59e-12 | 3 |
gall bladder primordium | 2.59e-12 | 3 |
duodenum | 3.24e-12 | 2 |