FFCP PHASE2:Hg19::chr6:90025011..90025020,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:2570 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:4091 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=2570 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=4091 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P28476 | ||
|association_with_transcript=0bp_to_ENST00000402938_5end | |association_with_transcript=0bp_to_ENST00000402938_5end | ||
|cluster_id=chr6:90025011..90025020,- | |cluster_id=chr6:90025011..90025020,- | ||
Latest revision as of 03:24, 20 September 2015
| Short description: | p1@GABRR2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_GABRR2_5end |
| Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
| Association with transcript: | 0bp_to_ENST00000402938_5end |
| EntrezGene: | GABRR2 |
| HGNC: | 4091 |
| UniProt: | P28476 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@GABRR2 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| eye | 4.86e-20 | 21 |
| visual system | 4.86e-20 | 21 |
| retina | 9.07e-18 | 6 |
| photoreceptor array | 9.07e-18 | 6 |
| posterior segment of eyeball | 9.07e-18 | 6 |
| sense organ | 1.03e-17 | 24 |
| sensory system | 1.03e-17 | 24 |
| entire sense organ system | 1.03e-17 | 24 |
Showing 1 to 8 of 8 entries
