FFCP PHASE1:Hg19::chr10:97181989..97182006,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10580 | |EntrezGene=10580 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14565 | |HGNC=14565 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-159bp_to_uc001kkl.2_5end | |association_with_transcript=-159bp_to_uc001kkl.2_5end | ||
|cluster_id=chr10:97181989..97182006,- | |||
|coexpression_cluster_id=C2085 | |||
|description=CAGE_peak_8_at_SORBS1_5end | |description=CAGE_peak_8_at_SORBS1_5end | ||
|id=chr10:97181989..97182006,- | |id=chr10:97181989..97182006,- | ||
|ontology_enrichment_celltype=CL:0000148!5.72e-13!10;CL:0000541!5.72e-13!10;CL:0000147!9.61e-09!14;CL:0002567!1.40e-07!3 | |ontology_enrichment_celltype=CL:0000148!5.72e-13!10;CL:0000541!5.72e-13!10;CL:0000147!9.61e-09!14;CL:0002567!1.40e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.72e-20;10!CL:0000147;2.51e-14;14!CL:0002567;1.18e-13;3!CL:0000710;1.06e-09;20!CL:0000075;6.56e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.77e-20,10;CL:0000541,1.77e-20,10;CL:0000147,2.57e-14,14;CL:0002567,1.26e-13,3;CL:0000710,1.07e-09,20;CL:0000075,6.63e-07,27 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.18e-12;3!UBERON:0003057;1.18e-12;3!UBERON:0007297;1.79e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002240;1.18e-12;3!UBERON:0005174;1.18e-12;3!UBERON:0001137;1.18e-12;3!UBERON:0006947;7.19e-12;3!UBERON:0004054;7.19e-12;3!UBERON:0002784;7.53e-10;4!UBERON:0001905;2.58e-09;2!UBERON:0002757;2.58e-09;2!UBERON:0010134;2.58e-09;2!UBERON:0005408;2.58e-09;2!UBERON:0001899;2.58e-09;2!UBERON:0003127;4.84e-09;2!UBERON:0005904;5.05e-09;4!UBERON:0000059;9.60e-09;11!UBERON:0004921;1.08e-07;33!UBERON:0005409;1.97e-07;22!UBERON:0000160;3.09e-07;17!UBERON:0001155;4.79e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.06e-27,114;UBERON:0002240,1.18e-12,3;UBERON:0005174,1.18e-12,3;UBERON:0001137,1.18e-12,3;UBERON:0006947,4.71e-12,3;UBERON:0004054,4.71e-12,3;UBERON:0002784,8.25e-10,4;UBERON:0001905,3.10e-09,2;UBERON:0002757,3.10e-09,2;UBERON:0010134,3.10e-09,2;UBERON:0005408,3.10e-09,2;UBERON:0001899,3.10e-09,2;UBERON:0005904,3.69e-09,4;UBERON:0003127,6.43e-09,2;UBERON:0000059,6.96e-09,11;UBERON:0003103,3.66e-08,68;UBERON:0000160,2.68e-07,17;UBERON:0001155,3.59e-07,9 | |||
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| ||
|short_description=p8@SORBS1 | |short_description=p8@SORBS1 | ||
}} | }} |
Latest revision as of 03:36, 20 September 2015
Short description: | p8@SORBS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SORBS1_5end |
Coexpression cluster: | C2085_Melanocyte_melanoma_retina_substantia_spinal_left_vagina |
Association with transcript: | -159bp_to_uc001kkl.2_5end |
EntrezGene: | SORBS1 |
HGNC: | 14565 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.77e-20 | 10 |
melanoblast | 1.77e-20 | 10 |
pigment cell | 2.57e-14 | 14 |
light melanocyte | 1.26e-13 | 3 |
neurecto-epithelial cell | 1.07e-09 | 20 |
columnar/cuboidal epithelial cell | 6.63e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.06e-27 | 114 |
spinal cord | 1.18e-12 | 3 |
dorsal region element | 1.18e-12 | 3 |
dorsum | 1.18e-12 | 3 |
male genital duct | 4.71e-12 | 3 |
internal male genitalia | 4.71e-12 | 3 |
regional part of diencephalon | 8.25e-10 | 4 |
pineal body | 3.10e-09 | 2 |
regional part of epithalamus | 3.10e-09 | 2 |
secretory circumventricular organ | 3.10e-09 | 2 |
circumventricular organ | 3.10e-09 | 2 |
epithalamus | 3.10e-09 | 2 |
duct of male reproductive system | 3.69e-09 | 4 |
open tracheal system trachea | 6.43e-09 | 2 |
large intestine | 6.96e-09 | 11 |
compound organ | 3.66e-08 | 68 |
intestine | 2.68e-07 | 17 |
colon | 3.59e-07 | 9 |