FFCP PHASE1:Hg19::chr10:97181989..97182006,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10580 | |EntrezGene=10580 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14565 | |HGNC=14565 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-159bp_to_uc001kkl.2_5end | |association_with_transcript=-159bp_to_uc001kkl.2_5end | ||
|cluster_id=chr10:97181989..97182006,- | |||
|coexpression_cluster_id=C2085 | |||
|description=CAGE_peak_8_at_SORBS1_5end | |description=CAGE_peak_8_at_SORBS1_5end | ||
|id=chr10:97181989..97182006,- | |id=chr10:97181989..97182006,- | ||
|ontology_enrichment_celltype=CL:0000148!5.72e-13!10;CL:0000541!5.72e-13!10;CL:0000147!9.61e-09!14;CL:0002567!1.40e-07!3 | |ontology_enrichment_celltype=CL:0000148!5.72e-13!10;CL:0000541!5.72e-13!10;CL:0000147!9.61e-09!14;CL:0002567!1.40e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.72e-20;10!CL:0000147;2.51e-14;14!CL:0002567;1.18e-13;3!CL:0000710;1.06e-09;20!CL:0000075;6.56e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.77e-20,10;CL:0000541,1.77e-20,10;CL:0000147,2.57e-14,14;CL:0002567,1.26e-13,3;CL:0000710,1.07e-09,20;CL:0000075,6.63e-07,27 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.18e-12;3!UBERON:0003057;1.18e-12;3!UBERON:0007297;1.79e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.12e-71!115;UBERON:0001049!4.24e-20!57;UBERON:0005068!4.24e-20!57;UBERON:0006241!4.24e-20!57;UBERON:0007135!4.24e-20!57;UBERON:0003075!1.61e-17!86;UBERON:0007284!1.61e-17!86;UBERON:0002346!2.64e-16!90;UBERON:0002308!1.27e-14!9;UBERON:0000125!1.27e-14!9;UBERON:0005743!1.53e-14!86;UBERON:0002616!1.79e-14!59;UBERON:0001017!2.29e-14!82;UBERON:0000073!2.13e-13!94;UBERON:0001016!2.13e-13!94;UBERON:0009663!7.45e-12!7;UBERON:0002780!9.75e-12!41;UBERON:0001890!9.75e-12!41;UBERON:0006240!9.75e-12!41;UBERON:0002420!1.90e-11!9;UBERON:0007245!1.90e-11!9;UBERON:0010009!1.90e-11!9;UBERON:0010011!1.90e-11!9;UBERON:0000454!1.90e-11!9;UBERON:0003080!2.41e-11!42;UBERON:0003076!3.86e-11!15;UBERON:0003057!3.86e-11!15;UBERON:0000955!4.07e-11!69;UBERON:0006238!4.07e-11!69;UBERON:0002298!4.76e-11!8;UBERON:0004121!5.52e-11!169;UBERON:0000924!1.81e-10!173;UBERON:0006601!1.81e-10!173;UBERON:0002020!5.92e-10!34;UBERON:0003528!5.92e-10!34;UBERON:0002791!4.18e-09!33;UBERON:0001893!9.75e-09!34;UBERON:0000153!3.18e-08!129;UBERON:0007811!3.18e-08!129;UBERON:0004732!3.98e-08!13;UBERON:0000033!1.34e-07!123;UBERON:0004111!1.56e-07!241;UBERON:0003056!2.34e-07!61;UBERON:0000369!2.48e-07!4;UBERON:0002435!2.48e-07!4;UBERON:0000204!2.48e-07!4;UBERON:0010082!2.48e-07!4;UBERON:0002240!4.32e-07!3;UBERON:0003978!6.06e-07!3;UBERON:0009751!6.06e-07!3;UBERON:0000946!6.06e-07!3;UBERON:0002523!6.06e-07!3;UBERON:0005983!6.06e-07!3;UBERON:0002165!6.06e-07!3;UBERON:0002062!6.06e-07!3;UBERON:0007280!6.06e-07!3;UBERON:0001896!7.68e-07!3;UBERON:0005290!7.68e-07!3;UBERON:0010096!7.68e-07!3;UBERON:0001869!7.82e-07!32;UBERON:0004733!8.43e-07!12;UBERON:0002028!8.43e-07!12;UBERON:0007277!8.43e-07!12;UBERON:0006947!8.63e-07!3;UBERON:0004054!8.63e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;1.18e-12;3!UBERON:0005174;1.18e-12;3!UBERON:0001137;1.18e-12;3!UBERON:0006947;7.19e-12;3!UBERON:0004054;7.19e-12;3!UBERON:0002784;7.53e-10;4!UBERON:0001905;2.58e-09;2!UBERON:0002757;2.58e-09;2!UBERON:0010134;2.58e-09;2!UBERON:0005408;2.58e-09;2!UBERON:0001899;2.58e-09;2!UBERON:0003127;4.84e-09;2!UBERON:0005904;5.05e-09;4!UBERON:0000059;9.60e-09;11!UBERON:0004921;1.08e-07;33!UBERON:0005409;1.97e-07;22!UBERON:0000160;3.09e-07;17!UBERON:0001155;4.79e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.06e-27,114;UBERON:0002240,1.18e-12,3;UBERON:0005174,1.18e-12,3;UBERON:0001137,1.18e-12,3;UBERON:0006947,4.71e-12,3;UBERON:0004054,4.71e-12,3;UBERON:0002784,8.25e-10,4;UBERON:0001905,3.10e-09,2;UBERON:0002757,3.10e-09,2;UBERON:0010134,3.10e-09,2;UBERON:0005408,3.10e-09,2;UBERON:0001899,3.10e-09,2;UBERON:0005904,3.69e-09,4;UBERON:0003127,6.43e-09,2;UBERON:0000059,6.96e-09,11;UBERON:0003103,3.66e-08,68;UBERON:0000160,2.68e-07,17;UBERON:0001155,3.59e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.55624942076812,14.8975485967728,14.0660936652056,3.4214489204541,7.09509699652932,16.8192112392594,14.5771480641595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.597743964753209,1.65770349318689,0,0,0,0,0,0,0,2.07151151837561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.361789315876224,0,0.774054819518572,0,0.219385397153973,0,0,2.15460723810632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,1.76915129006678,4.27721101453538,0,0,0,0.876214728748802,1.60515529459758,0,0,0,0,1.97292201424695,2.41981432097328,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,1.92199335066233,0,0,0,0,2.61870344518732,0,2.48578814858586,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,3.6306712165393,2.97908551215189,0.717873024576814,0.199679000498991,0.429226048136571,0.223171457441873,0.739018197353989,0,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,3.57347663186684,1.32418394073086,0,0,0,0,0,0,0,0,0.293104467356165,0,0.517131825446202,0.26446520348538,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0.1251909307065,4.0138643698305,1.33114861844223,0.993542447062135,0,0,0.909894705249887,14.2732666772484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.490696182767533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.159633859057151,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0,0,0.206686796501184,0,0,1.09651553371436,2.97726707033577,0,0,2.14280734351315,5.38053955550118,0,0,0,0.115233987555779,0,0.339848664884159,0.0657727735628491,0,0,0.863424021355654,0.314231179832004,0,3.65263488203798,0,0,9.86376309637857,0,0,0,0,0,0,0,0.860454717640555,0,0,1.27016115057279,0,0,0,0,0,0,0,0.513314034281235,0,1.94284397223656,0,0.198950775161368,0,0,0,0,1.08043821351123,0.655678681511872,0,4.6578181133242,0,1.17785080268967,2.67341760294377,4.6492130034174,0,0.0939839179798536,0,0,0,0,0,2.19100916473955,0.458729283404541,2.58011249672612,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0.267964130156178,2.48750831837634,0.20686599172379,1.0661699095049,0.952257725854961,0,0,0,0.318235791390825,0.404234377916439,1.52401723527873,1.02669990325584,0.0673520530145875,2.07994395638761,2.32862249582209,0,0,0,0,0,0.488965776731466,1.22068853494722,6.65756774185513,1.40891655513718,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.55624942076812,14.8975485967728,14.0660936652056,3.4214489204541,7.09509699652932,16.8192112392594,14.5771480641595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.597743964753209,1.65770349318689,0,0,0,0,0,0,0,2.07151151837561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.361789315876224,0,0.774054819518572,0,0.219385397153973,0,0,2.15460723810632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,1.76915129006678,4.27721101453538,0,0,0,0.876214728748802,1.60515529459758,0,0,0,0,1.97292201424695,2.41981432097328,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,1.92199335066233,0,0,0,0,2.61870344518732,0,2.48578814858586,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,3.6306712165393,2.97908551215189,0.717873024576814,0.199679000498991,0.429226048136571,0.223171457441873,0.739018197353989,0,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,3.57347663186684,1.32418394073086,0,0,0,0,0,0,0,0,0.293104467356165,0,0.517131825446202,0.26446520348538,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0.1251909307065,4.0138643698305,1.33114861844223,0.993542447062135,0,0,0.909894705249887,14.2732666772484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.490696182767533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.159633859057151,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0,0,0.206686796501184,0,0,1.09651553371436,2.97726707033577,0,0,2.14280734351315,5.38053955550118,0,0,0,0.115233987555779,0,0.339848664884159,0.0657727735628491,0,0,0.863424021355654,0.314231179832004,0,3.65263488203798,0,0,9.86376309637857,0,0,0,0,0,0,0,0.860454717640555,0,0,1.27016115057279,0,0,0,0,0,0,0,0.513314034281235,0,1.94284397223656,0,0.198950775161368,0,0,0,0,1.08043821351123,0.655678681511872,0,4.6578181133242,0,1.17785080268967,2.67341760294377,4.6492130034174,0,0.0939839179798536,0,0,0,0,0,2.19100916473955,0.458729283404541,2.58011249672612,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0.267964130156178,2.48750831837634,0.20686599172379,1.0661699095049,0.952257725854961,0,0,0,0.318235791390825,0.404234377916439,1.52401723527873,1.02669990325584,0.0673520530145875,2.07994395638761,2.32862249582209,0,0,0,0,0,0.488965776731466,1.22068853494722,6.65756774185513,1.40891655513718,0 | ||
|short_description=p8@SORBS1 | |short_description=p8@SORBS1 | ||
}} | }} |
Latest revision as of 03:36, 20 September 2015
Short description: | p8@SORBS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SORBS1_5end |
Coexpression cluster: | C2085_Melanocyte_melanoma_retina_substantia_spinal_left_vagina |
Association with transcript: | -159bp_to_uc001kkl.2_5end |
EntrezGene: | SORBS1 |
HGNC: | 14565 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.77e-20 | 10 |
melanoblast | 1.77e-20 | 10 |
pigment cell | 2.57e-14 | 14 |
light melanocyte | 1.26e-13 | 3 |
neurecto-epithelial cell | 1.07e-09 | 20 |
columnar/cuboidal epithelial cell | 6.63e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.06e-27 | 114 |
spinal cord | 1.18e-12 | 3 |
dorsal region element | 1.18e-12 | 3 |
dorsum | 1.18e-12 | 3 |
male genital duct | 4.71e-12 | 3 |
internal male genitalia | 4.71e-12 | 3 |
regional part of diencephalon | 8.25e-10 | 4 |
pineal body | 3.10e-09 | 2 |
regional part of epithalamus | 3.10e-09 | 2 |
secretory circumventricular organ | 3.10e-09 | 2 |
circumventricular organ | 3.10e-09 | 2 |
epithalamus | 3.10e-09 | 2 |
duct of male reproductive system | 3.69e-09 | 4 |
open tracheal system trachea | 6.43e-09 | 2 |
large intestine | 6.96e-09 | 11 |
compound organ | 3.66e-08 | 68 |
intestine | 2.68e-07 | 17 |
colon | 3.59e-07 | 9 |