FFCP PHASE1:Hg19::chr14:51955987..51955996,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=122786 | |EntrezGene=122786 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19839 | |HGNC=19839 | ||
|TSSclassifier=strong | |||
|UniProt=Q96NE9 | |UniProt=Q96NE9 | ||
|association_with_transcript=132bp_to_ENST00000356218,NM_001042481,uc001wzb.2_5end | |association_with_transcript=132bp_to_ENST00000356218,NM_001042481,uc001wzb.2_5end | ||
|cluster_id=chr14:51955987..51955996,+ | |||
|coexpression_cluster_id=C268 | |coexpression_cluster_id=C268 | ||
|description=CAGE_peak_31_at_FRMD6_5end | |description=CAGE_peak_31_at_FRMD6_5end | ||
|id=chr14:51955987..51955996,+ | |id=chr14:51955987..51955996,+ | ||
|ontology_enrichment_celltype=CL:0002076!1.79e-32!43;CL:0000223!2.07e-22!59;CL:0002368!6.71e-21!13;CL:0000066!1.24e-15!254;CL:0002251!2.52e-15!21;CL:0002621!1.29e-14!3;CL:0000068!4.12e-14!3;CL:0000069!4.12e-14!3;CL:0000307!4.12e-14!3;CL:0000377!4.12e-14!3;CL:0002159!8.88e-12!13;CL:0000244!4.83e-11!4;CL:0000731!4.83e-11!4;CL:0002202!5.01e-08!9;CL:0002632!5.01e-08!9;CL:0000220!2.18e-07!246;CL:0000076!2.37e-07!62;CL:0002077!2.55e-07!33;CL:0002166!2.77e-07!3;CL:0002321!2.79e-07!248;CL:0000240!6.56e-07!6;CL:0000311!6.56e-07!6;CL:0000079!6.56e-07!6;CL:0000237!6.56e-07!6;CL:0000036!6.56e-07!6;CL:0000357!6.56e-07!6;CL:0000114!6.56e-07!6 | |ontology_enrichment_celltype=CL:0002076!1.79e-32!43;CL:0000223!2.07e-22!59;CL:0002368!6.71e-21!13;CL:0000066!1.24e-15!254;CL:0002251!2.52e-15!21;CL:0002621!1.29e-14!3;CL:0000068!4.12e-14!3;CL:0000069!4.12e-14!3;CL:0000307!4.12e-14!3;CL:0000377!4.12e-14!3;CL:0002159!8.88e-12!13;CL:0000244!4.83e-11!4;CL:0000731!4.83e-11!4;CL:0002202!5.01e-08!9;CL:0002632!5.01e-08!9;CL:0000220!2.18e-07!246;CL:0000076!2.37e-07!62;CL:0002077!2.55e-07!33;CL:0002166!2.77e-07!3;CL:0002321!2.79e-07!248;CL:0000240!6.56e-07!6;CL:0000311!6.56e-07!6;CL:0000079!6.56e-07!6;CL:0000237!6.56e-07!6;CL:0000036!6.56e-07!6;CL:0000357!6.56e-07!6;CL:0000114!6.56e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002166;3.33e-34;3!CL:0002368;1.11e-17;13!CL:0002076;1.22e-14;42!CL:0002621;1.19e-09;3!CL:0002231;1.60e-09;3!CL:0000307;1.60e-09;3!CL:0002159;3.90e-08;14!CL:0000244;1.49e-07;4!CL:0000731;1.49e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,3.33e-34,3;CL:0002368,1.14e-17,13;CL:0002076,6.28e-15,42;CL:0000223,6.95e-11,58;CL:0002621,1.10e-09,3;CL:0002231,1.54e-09,3;CL:0000068,1.81e-09,3;CL:0000069,1.81e-09,3;CL:0000307,1.81e-09,3;CL:0000377,1.81e-09,3;CL:0002159,3.90e-08,14;CL:0000244,1.59e-07,4;CL:0000731,1.59e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000377;1.60e-09;3 | |||
|ontology_enrichment_disease=DOID:1749!2.42e-10!14 | |ontology_enrichment_disease=DOID:1749!2.42e-10!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000161!6.11e-21!35;UBERON:0000166!3.52e-15!21;UBERON:0000365!5.05e-15!5;UBERON:0003102!7.78e-15!95;UBERON:0001949!1.29e-14!3;UBERON:0003729!9.22e-14!5;UBERON:0001004!1.19e-13!72;UBERON:0000165!1.49e-13!28;UBERON:0000930!1.49e-13!28;UBERON:0004119!1.54e-13!169;UBERON:0000925!1.54e-13!169;UBERON:0006595!1.54e-13!169;UBERON:0005910!1.57e-12!6;UBERON:0000344!3.71e-12!12;UBERON:0003343!4.12e-10!4;UBERON:0004785!4.12e-10!4;UBERON:0001255!1.20e-09!2;UBERON:0001556!1.20e-09!2;UBERON:0001444!1.09e-08!48;UBERON:0000065!9.22e-08!53;UBERON:0000162!2.16e-07!14;UBERON:0001353!2.16e-07!14;UBERON:0000163!2.16e-07!14;UBERON:0006866!2.16e-07!14;UBERON:0000164!2.16e-07!14;UBERON:0000931!2.16e-07!14;UBERON:0001007!3.03e-07!155;UBERON:0001555!3.03e-07!155;UBERON:0007026!3.03e-07!155;UBERON:0004122!7.04e-07!15 | |ontology_enrichment_uberon=UBERON:0000161!6.11e-21!35;UBERON:0000166!3.52e-15!21;UBERON:0000365!5.05e-15!5;UBERON:0003102!7.78e-15!95;UBERON:0001949!1.29e-14!3;UBERON:0003729!9.22e-14!5;UBERON:0001004!1.19e-13!72;UBERON:0000165!1.49e-13!28;UBERON:0000930!1.49e-13!28;UBERON:0004119!1.54e-13!169;UBERON:0000925!1.54e-13!169;UBERON:0006595!1.54e-13!169;UBERON:0005910!1.57e-12!6;UBERON:0000344!3.71e-12!12;UBERON:0003343!4.12e-10!4;UBERON:0004785!4.12e-10!4;UBERON:0001255!1.20e-09!2;UBERON:0001556!1.20e-09!2;UBERON:0001444!1.09e-08!48;UBERON:0000065!9.22e-08!53;UBERON:0000162!2.16e-07!14;UBERON:0001353!2.16e-07!14;UBERON:0000163!2.16e-07!14;UBERON:0006866!2.16e-07!14;UBERON:0000164!2.16e-07!14;UBERON:0000931!2.16e-07!14;UBERON:0001007!3.03e-07!155;UBERON:0001555!3.03e-07!155;UBERON:0007026!3.03e-07!155;UBERON:0004122!7.04e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0001708;5.94e-26;4!UBERON:0008895;5.94e-26;4!UBERON:0011159;5.44e-21;5!UBERON:0011137;4.22e-10;11!UBERON:0010323;4.22e-10;11!UBERON:0001949;1.19e-09;3!UBERON:0000486;2.66e-09;12!UBERON:0000075;3.14e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,5.94e-26,4;UBERON:0008895,5.94e-26,4;UBERON:0011159,5.44e-21,5;UBERON:0010188,1.12e-17,6;UBERON:0002539,1.12e-17,6;UBERON:0008816,1.12e-17,6;UBERON:0010323,4.22e-10,11;UBERON:0001949,1.10e-09,3;UBERON:0011137,3.90e-08,14;UBERON:0000075,3.14e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,2.72746120590835,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768251997860379,0,0.100528972411631,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.86358894857377,2.69372684760534,0.358234090811393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60405176242628,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,1.98341898433174,0.768760269460425,1.40373983744043,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,0.670302275535787,1.08890984861323,0,0.86101074534246,0,0.886860307073351,2.06751060186264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419638523158333,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.733714394086716,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0,0,0.814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,2.72746120590835,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768251997860379,0,0.100528972411631,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.86358894857377,2.69372684760534,0.358234090811393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60405176242628,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,1.98341898433174,0.768760269460425,1.40373983744043,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,0.670302275535787,1.08890984861323,0,0.86101074534246,0,0.886860307073351,2.06751060186264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419638523158333,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.733714394086716,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0,0,0.814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p31@FRMD6 | |short_description=p31@FRMD6 | ||
}} | }} |
Latest revision as of 04:49, 20 September 2015
Short description: | p31@FRMD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_31_at_FRMD6_5end |
Coexpression cluster: | C268_Mallassezderived_Urothelial_Gingival_Small_Bronchial_Tracheal_Prostate |
Association with transcript: | 132bp_to_ENST00000356218, NM_001042481, uc001wzb.2_5end |
EntrezGene: | FRMD6 |
HGNC: | 19839 |
UniProt: | Q96NE9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 3.33e-34 | 3 |
respiratory epithelial cell | 1.14e-17 | 13 |
endo-epithelial cell | 6.28e-15 | 42 |
endodermal cell | 6.95e-11 | 58 |
gingival epithelial cell | 1.10e-09 | 3 |
epithelial cell of prostate | 1.54e-09 | 3 |
duct epithelial cell | 1.81e-09 | 3 |
branched duct epithelial cell | 1.81e-09 | 3 |
tracheal epithelial cell | 1.81e-09 | 3 |
tracheoblast | 1.81e-09 | 3 |
general ecto-epithelial cell | 3.90e-08 | 14 |
transitional epithelial cell | 1.59e-07 | 4 |
urothelial cell | 1.59e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 5.94e-26 | 4 |
splanchnocranium | 5.94e-26 | 4 |
primary subdivision of cranial skeletal system | 5.44e-21 | 5 |
protuberance | 1.12e-17 | 6 |
pharyngeal arch | 1.12e-17 | 6 |
embryonic head | 1.12e-17 | 6 |
cranial skeletal system | 4.22e-10 | 11 |
gingival epithelium | 1.10e-09 | 3 |
axial skeletal system | 3.90e-08 | 14 |
subdivision of skeletal system | 3.14e-07 | 16 |