FFCP PHASE1:Hg19::chr11:74442527..74442538,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25884 | |EntrezGene=25884 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24168 | |HGNC=24168 | ||
|TSSclassifier=strong | |||
|UniProt=Q6WN34 | |UniProt=Q6WN34 | ||
|association_with_transcript=-97bp_to_ENST00000376332_5end | |association_with_transcript=-97bp_to_ENST00000376332_5end | ||
|cluster_id=chr11:74442527..74442538,- | |||
|coexpression_cluster_id=C2164 | |coexpression_cluster_id=C2164 | ||
|description=CAGE_peak_3_at_CHRDL2_5end | |description=CAGE_peak_3_at_CHRDL2_5end | ||
|id=chr11:74442527..74442538,- | |id=chr11:74442527..74442538,- | ||
|ontology_enrichment_celltype=CL:0002622!8.48e-08!3 | |ontology_enrichment_celltype=CL:0002622!8.48e-08!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006603;2.70e-12;65!UBERON:0006242;2.89e-08;1!UBERON:0000358;3.55e-08;1!UBERON:0010115;4.21e-08;1!UBERON:0010226;5.89e-08;1!UBERON:0001045;1.22e-07;1!UBERON:0004874;1.22e-07;1!UBERON:0005062;1.54e-07;4!UBERON:0007284;1.54e-07;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3307;3.54e-14;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,2.63e-14,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.59e-22!115;UBERON:0003101!1.75e-10!22;UBERON:0000079!1.75e-10!22;UBERON:0003937!2.10e-08!12;UBERON:0005399!2.10e-08!12;UBERON:0001046!2.17e-08!19;UBERON:0003978!2.82e-08!3;UBERON:0009751!2.82e-08!3;UBERON:0000946!2.82e-08!3;UBERON:0002523!2.82e-08!3;UBERON:0005983!2.82e-08!3;UBERON:0002165!2.82e-08!3;UBERON:0002062!2.82e-08!3;UBERON:0007280!2.82e-08!3;UBERON:0000162!3.30e-07!14;UBERON:0001353!3.30e-07!14;UBERON:0000163!3.30e-07!14;UBERON:0006866!3.30e-07!14;UBERON:0000164!3.30e-07!14;UBERON:0000931!3.30e-07!14;UBERON:0002367!6.94e-07!11;UBERON:0010147!6.94e-07!11;UBERON:0009846!6.94e-07!11;UBERON:0003353!6.94e-07!11;UBERON:0004902!6.94e-07!11;UBERON:0003820!6.94e-07!11;UBERON:0009847!6.94e-07!11 | |ontology_enrichment_uberon=UBERON:0007023!2.59e-22!115;UBERON:0003101!1.75e-10!22;UBERON:0000079!1.75e-10!22;UBERON:0003937!2.10e-08!12;UBERON:0005399!2.10e-08!12;UBERON:0001046!2.17e-08!19;UBERON:0003978!2.82e-08!3;UBERON:0009751!2.82e-08!3;UBERON:0000946!2.82e-08!3;UBERON:0002523!2.82e-08!3;UBERON:0005983!2.82e-08!3;UBERON:0002165!2.82e-08!3;UBERON:0002062!2.82e-08!3;UBERON:0007280!2.82e-08!3;UBERON:0000162!3.30e-07!14;UBERON:0001353!3.30e-07!14;UBERON:0000163!3.30e-07!14;UBERON:0006866!3.30e-07!14;UBERON:0000164!3.30e-07!14;UBERON:0000931!3.30e-07!14;UBERON:0002367!6.94e-07!11;UBERON:0010147!6.94e-07!11;UBERON:0009846!6.94e-07!11;UBERON:0003353!6.94e-07!11;UBERON:0004902!6.94e-07!11;UBERON:0003820!6.94e-07!11;UBERON:0009847!6.94e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0002133;3.21e-14;2!UBERON:0003978;8.90e-10;3!UBERON:0004151;8.90e-10;3!UBERON:0000946;8.90e-10;3!UBERON:0006834;2.70e-08;1!UBERON:0002363;4.21e-08;1!UBERON:0005795;5.89e-08;1!UBERON:0002084;5.89e-08;1!UBERON:0002135;5.89e-08;1!UBERON:0002134;5.89e-08;1!UBERON:0002082;5.89e-08;1!UBERON:0005208;5.89e-08;1!UBERON:0004145;5.89e-08;1!UBERON:0005946;5.89e-08;1!UBERON:0005965;5.89e-08;1!UBERON:0002078;5.89e-08;1!UBERON:0001154;1.22e-07;1!UBERON:0000989;1.22e-07;1!UBERON:0001301;1.22e-07;1!UBERON:0001153;1.22e-07;1!UBERON:0008811;1.22e-07;1!UBERON:0009854;1.22e-07;1!UBERON:0001155;4.84e-07;9!UBERON:0003101;5.38e-07;22!UBERON:0000079;5.38e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.06e-15,114;UBERON:0002133,3.67e-14,2;UBERON:0004151,9.30e-10,3;UBERON:0003978,9.72e-10,3;UBERON:0009751,9.72e-10,3;UBERON:0000946,9.72e-10,3;UBERON:0002523,9.72e-10,3;UBERON:0005983,9.72e-10,3;UBERON:0002165,9.72e-10,3;UBERON:0002062,9.72e-10,3;UBERON:0007280,9.72e-10,3;UBERON:0006834,2.70e-08,1;UBERON:0002363,4.35e-08,1;UBERON:0007645,4.35e-08,1;UBERON:0007647,4.35e-08,1;UBERON:0010115,4.35e-08,1;UBERON:0002084,5.33e-08,1;UBERON:0002082,5.33e-08,1;UBERON:0010226,5.33e-08,1;UBERON:0002135,5.70e-08,1;UBERON:0002134,6.97e-08,1;UBERON:0005208,6.97e-08,1;UBERON:0005946,6.97e-08,1;UBERON:0005965,6.97e-08,1;UBERON:0002078,6.97e-08,1;UBERON:0001154,8.51e-08,1;UBERON:0001153,8.51e-08,1;UBERON:0001045,8.51e-08,1;UBERON:0001301,1.11e-07,1;UBERON:0000989,1.18e-07,1;UBERON:0008811,1.18e-07,1;UBERON:0006258,1.18e-07,1;UBERON:0005876,1.18e-07,1;UBERON:0004874,1.18e-07,1;UBERON:0001155,4.50e-07,9;UBERON:0003101,4.94e-07,22;UBERON:0000079,4.94e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0.795285947051099,1.94653948121054,0,0,0,1.11332214173056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,1.27587750330633,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0.459257792658427,1.0925470080403,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,1.93398740871803,0,0,0,0,0,0,0,3.74844941420348,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0,0,0.438770794307945,0,0,5.46346835376959,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4768118060935,2.4441205797345,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0,3.34888872030986,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,0.969890164884194,0,0.225980740780532,0,0,0,0,0,7.25740182113799,0,0,0.229073192331831,0,0,0,3.06402245001834,0,0.104602846312333,0,0,0,0,0,0,0,2.51354161145029,0.916641696046735,2.15361907373044,0,0,0.669514372325618,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,0,2.64836788146173,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0.308801447160972,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0.276629009856872,0,0,0,0,0,0,0,0,0,1.27857558193737,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,1.48863353516788,0,0,1.07140367175657,0,0,0,0.266107110487916,0,0.342976018874837,0,0,0,0,1.96232732126285,0,0,0.913158720509496,0,0,0.142953088353313,0,0,0,6.41369091784202,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.231522474323834,0,0,3.92237314806249,0,0,0.297046400327086,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,1.74291005901951,0.267964130156178,0,0,0.213233981900981,1.1903221573187,0,0,0,0,0,0.217716747896961,1.71116650542641,0,1.14755528628282,0,0,0,1.9307228228694,0,4.69281884806909,12.4686273066524,2.84827324821017,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0.795285947051099,1.94653948121054,0,0,0,1.11332214173056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,1.27587750330633,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0.459257792658427,1.0925470080403,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,1.93398740871803,0,0,0,0,0,0,0,3.74844941420348,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0,0,0.438770794307945,0,0,5.46346835376959,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4768118060935,2.4441205797345,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0,3.34888872030986,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,0.969890164884194,0,0.225980740780532,0,0,0,0,0,7.25740182113799,0,0,0.229073192331831,0,0,0,3.06402245001834,0,0.104602846312333,0,0,0,0,0,0,0,2.51354161145029,0.916641696046735,2.15361907373044,0,0,0.669514372325618,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,0,2.64836788146173,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0.308801447160972,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0.276629009856872,0,0,0,0,0,0,0,0,0,1.27857558193737,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,1.48863353516788,0,0,1.07140367175657,0,0,0,0.266107110487916,0,0.342976018874837,0,0,0,0,1.96232732126285,0,0,0.913158720509496,0,0,0.142953088353313,0,0,0,6.41369091784202,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.231522474323834,0,0,3.92237314806249,0,0,0.297046400327086,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,1.74291005901951,0.267964130156178,0,0,0.213233981900981,1.1903221573187,0,0,0,0,0,0.217716747896961,1.71116650542641,0,1.14755528628282,0,0,0,1.9307228228694,0,4.69281884806909,12.4686273066524,2.84827324821017,0,0,0 | ||
|short_description=p3@CHRDL2 | |short_description=p3@CHRDL2 | ||
}} | }} |
Latest revision as of 05:06, 20 September 2015
Short description: | p3@CHRDL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CHRDL2_5end |
Coexpression cluster: | C2164_gall_uterus_cervix_left_dura_sacrococcigeal_epididymis |
Association with transcript: | -97bp_to_ENST00000376332_5end |
EntrezGene: | CHRDL2 |
HGNC: | 24168 |
UniProt: | Q6WN34 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 7.06e-15 | 114 |
atrioventricular valve | 3.67e-14 | 2 |
cardiac chamber | 9.30e-10 | 3 |
valve | 9.72e-10 | 3 |
cardiac mesenchyme | 9.72e-10 | 3 |
cardial valve | 9.72e-10 | 3 |
tunica intima | 9.72e-10 | 3 |
heart layer | 9.72e-10 | 3 |
endocardium | 9.72e-10 | 3 |
endocardial cushion | 9.72e-10 | 3 |
presumptive endocardium | 9.72e-10 | 3 |
uterus or analog | 2.70e-08 | 1 |
dura mater | 4.35e-08 | 1 |
future meninx | 4.35e-08 | 1 |
ectomeninx | 4.35e-08 | 1 |
future dura mater | 4.35e-08 | 1 |
heart left ventricle | 5.33e-08 | 1 |
cardiac ventricle | 5.33e-08 | 1 |
future cardiac ventricle | 5.33e-08 | 1 |
mitral valve | 5.70e-08 | 1 |
tricuspid valve | 6.97e-08 | 1 |
right atrium valve | 6.97e-08 | 1 |
outflow tract of atrium | 6.97e-08 | 1 |
outflow part of right atrium | 6.97e-08 | 1 |
right cardiac atrium | 6.97e-08 | 1 |
vermiform appendix | 8.51e-08 | 1 |
caecum | 8.51e-08 | 1 |
midgut | 8.51e-08 | 1 |
epididymis | 1.11e-07 | 1 |
penis | 1.18e-07 | 1 |
intromittent organ | 1.18e-07 | 1 |
lateral plate mesenchyme | 1.18e-07 | 1 |
undifferentiated genital tubercle | 1.18e-07 | 1 |
somatopleure | 1.18e-07 | 1 |
colon | 4.50e-07 | 9 |
male organism | 4.94e-07 | 22 |
male reproductive system | 4.94e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
teratoma | 2.63e-14 | 2 |