FFCP PHASE1:Hg19::chr22:38142239..38142297,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=11078 | |EntrezGene=11078 | ||
| Line 8: | Line 8: | ||
|UniProt=F8W6V6,Q9H2D6,F2Z2W0 | |UniProt=F8W6V6,Q9H2D6,F2Z2W0 | ||
|association_with_transcript=0bp_to_ENST00000403663,ENST00000428075,NM_007032,NM_138632,uc003atv.2,uc003atw.2_5end | |association_with_transcript=0bp_to_ENST00000403663,ENST00000428075,NM_007032,NM_138632,uc003atv.2,uc003atw.2_5end | ||
|cluster_id=chr22:38142239..38142297,+ | |||
|description=CAGE_peak_1_at_TRIOBP_5end | |description=CAGE_peak_1_at_TRIOBP_5end | ||
|id=chr22:38142239..38142297,+ | |id=chr22:38142239..38142297,+ | ||
Latest revision as of 06:11, 20 September 2015
| Short description: | p1@TRIOBP |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_TRIOBP_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000403663, ENST00000428075, NM_007032, NM_138632, uc003atv.2, uc003atw.2_5end |
| EntrezGene: | TRIOBP |
| HGNC: | 17009 |
| UniProt: | F8W6V6Q9H2D6F2Z2W0 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@TRIOBP |
|---|
0
20
40
60
80
100
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mesodermal cell | 1.53e-18 | 121 |
| muscle precursor cell | 1.09e-15 | 58 |
| myoblast | 1.09e-15 | 58 |
| multi-potent skeletal muscle stem cell | 1.09e-15 | 58 |
| muscle cell | 2.22e-15 | 55 |
| fibroblast | 6.87e-14 | 76 |
| smooth muscle cell | 1.23e-12 | 43 |
| smooth muscle myoblast | 1.23e-12 | 43 |
| electrically responsive cell | 3.21e-11 | 61 |
| electrically active cell | 3.21e-11 | 61 |
Showing 1 to 10 of 14 entries
| Ontology term | p-value | n |
|---|---|---|
| epithelial vesicle | 1.11e-19 | 78 |
| vasculature | 8.37e-18 | 78 |
| vascular system | 8.37e-18 | 78 |
| mesenchyme | 1.07e-17 | 160 |
| entire embryonic mesenchyme | 1.07e-17 | 160 |
| circulatory system | 1.77e-17 | 112 |
| somite | 3.06e-17 | 71 |
| presomitic mesoderm | 3.06e-17 | 71 |
| presumptive segmental plate | 3.06e-17 | 71 |
| dermomyotome | 3.06e-17 | 71 |
Showing 1 to 10 of 55 entries
