FFCP PHASE1:Hg19::chr20:17639558..17639587,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:17639558..17639587,- to FFCP PHASE1:Hg19::chr20:17639558..17639587,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6238 | |EntrezGene=6238 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10448 | |HGNC=10448 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000495501_5end | |||
|cluster_id=chr20:17639558..17639587,- | |||
|description=CAGE_peak_8_at_RRBP1_5end | |||
|id=chr20:17639558..17639587,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;8.35e-10;12!CL:0002504;7.97e-08;3!CL:1000279;7.97e-08;3!CL:1000280;7.97e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.04e-10,12;CL:0002504,2.96e-08,3;CL:1000279,2.96e-08,3;CL:1000280,2.96e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.89e-11;19!UBERON:0006925;1.89e-11;19!UBERON:0002365;1.41e-10;31!UBERON:0002330;1.41e-10;31!UBERON:0002423;3.48e-08;25!UBERON:0002530;3.09e-07;57!UBERON:0002368;4.00e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.49e-11,19;UBERON:0006925,2.49e-11,19;UBERON:0008836,2.49e-11,19;UBERON:0002365,6.65e-11,31;UBERON:0002330,6.65e-11,31;UBERON:0002530,1.62e-10,59;UBERON:0008835,1.72e-09,22;UBERON:0003894,1.72e-09,22;UBERON:0003929,4.90e-09,54;UBERON:0009854,5.51e-09,23;UBERON:0007499,4.24e-08,25;UBERON:0009497,4.24e-08,25;UBERON:0000015,4.24e-08,25;UBERON:0002423,4.24e-08,25;UBERON:0006235,4.24e-08,25;UBERON:0004161,4.24e-08,25;UBERON:0009856,1.04e-07,26;UBERON:0005256,5.73e-07,122;UBERON:0001829,9.86e-07,2 | |||
|phase1_expression=0.363356758541113,1.07050261945492,0,0,0,0.872338524100369,2.53299878168311,0,0.522371256399677,0,0.697801167972428,0.218441372130172,0.527533956456907,0.37129905888014,0,0,0.602694528023977,0,0,0,0.204000691244253,0.940364164434263,0,0,0,0.229240217243854,0.0821005894499457,0.157421562627358,0,0,0.154816123316076,0,0,0,0.154934401160603,0.284338464974843,0,0,0.401088894940283,0.217010870715852,0,0,0,0.290796477559129,0,0.242584061187816,0,0.411167888021826,0.309706370895104,0.28769239232215,0.256160706529101,0,0,0.645484683583826,0,0.564727018627814,0.545812300115692,0,0,0,0,0,0.199463657621632,0.426224750532694,0.290209238628584,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0.425208599930087,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0,0.144824403882799,0,0.670700859703636,0.255725123687061,0.722878304769133,0.50133791063589,1.30361867064741,0,0.486634870302636,0.189069634328136,0.665188192387692,0.527008714158756,0.327447688744282,0,0.370784442784429,0.324547393654683,0,0.398873881556595,0.238490624305342,0,0,0.198762407366705,1.72046919021225,0,0,0.838998872419812,0.550236083880135,0,1.03366703667732,0,0.33472061276467,0.805658634218294,0,0.488124115096339,0,0.81014194788176,0.267899184852239,0,0.225222960966644,0,0,0.183201743930407,0,0,0.436094052142534,0.496971951695318,0.759783069987479,0.132409180813219,0.860509862246441,0.354668382198357,0,0,0.98667019366864,0,0.134710672069688,0.163461903113459,0,1.15235184896,0,0.312160076830321,0,0.896692083310806,0.23486899728753,0.323745888736263,0,0,1.35117749042945,0.206651562351531,0,0.989067717114227,0,0,0.673344455816265,0.750711119231785,0,0.438977620880838,1.22595118319608,0.600952235626387,0.680593098960126,1.4351170855109,0,0.423863802319124,0.600182192168805,0,1.03056216018252,0.558350568994769,1.85653965465393,0.0974370051611986,0.757301322732344,0.368199594569197,0,1.42003837006646,0.10075209822764,0.67824236924195,0.193260853163297,0.545492241181669,0,0.487894824518382,0.397589304964456,0.116193942869518,0.207322110030741,0.252320850875628,0.72995471815166,0,1.92972281457866,0,0,0,0.236613600079688,0.505754070234305,0.241011029883482,0.441175890929576,0.217879444092406,0,0.134831308160164,0,0,0,1.40241773803446,0.4115740113314,0,1.26755034821831,1.96565443335525,2.36315962672562,0,1.35287282397425,0.343135620597051,0.219500570817251,0,0.603173834469785,0.277765335475589,0,1.03993478527958,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0.492434012174795,0.234004265139238,0.148631162288728,0,0.671928512795438,0.283550194484773,0.179117045405697,0.871901815541886,0.766765358330422,0,0.176096868026452,0.207328115540772,0,0.12624243342638,0.190493682876507,0,0,1.71072446022705,0.616964956219941,0.300343057843917,0.285826432630578,0,0,0.22001485746285,0.129271715757778,0,0,0.531876233169741,0,0,0,0.799266537048298,1.00084595560703,0.542621605391443,1.64648067356154,0.325736184293735,1.06617584622764,0,0.301439377059586,0,1.09970290300263,0,0,0,0.479249710983165,0,0,0.723906533337896,1.2328579353023,0.179060963239896,0.112085143993527,0,0.646882724578552,0.256686072559497,0,0,0,0,0.637938751653163,0,2.99161459204025,0,0.736148950314839,0.500170521059677,0,1.87173775377726,1.42743191037729,1.10391690523754,0.819989904948992,0.300946099727719,0,0,1.32845119707087,0,0.868836144680828,0,0.343143423810856,0,0.215714200818617,0.320182673410333,0,0,0,0,0.153461973288062,1.40330047216537,0.256278298511402,0,1.28683136914886,0,0.771048469013278,0.710246901252508,0.328508624055237,0.519254429183621,0.348631135379878,1.20859449591622,1.20303882181971,0.736647911487171,1.03333003348146,0.910455840033585,0.655622074797121,0,0.308061348417659,0,0,0.105551628892876,0,0,1.29549549661284,0,0.270946437543853,0.501689773854853,0,0,0.447749509444357,0,0,0.256450125116389,0.328014645699706,0,0.721287081534056,0.915694648183434,0.165018999841176,0,1.30012049207304,0,0.290012154876366,0.154048617114644,0,0.137836572484531,0.537101224341368,1.45016693914229,0.681813019328807,0.534192213880424,0.165284915360978,1.34533047155574,0.127612712494584,0.30347334256665,0.464845549297286,1.5740617341532,0,0,0,0,0.18532421910392,0,0.372158369359667,0.949138274156178,0.953150969619124,0.255897791311334,1.71175595213568,0,0,1.43897966066652,1.64722217841633,1.53156123049392,0,0,0,0.48763373908959,0.731140468893853,0,0,2.12108147930569,0,0,0.66343897524122,0,1.73632660280006,0,0,0,0,0.143411352204052,0.196498082026242,0,0.709522128141196,0.422215270595328,0.987884678879706,0,0.349934720244983,0.0962221127255121,0,0,0.282431402330337,0,0,0.443430153536676,0.229723400206959,0,0,0,0.238231775457789,0.411362273086194,0,0.540031437238115,0,0.106824071127473,0,0.490080431962063,0,0.144269212976445,0,0.159426272728822,0,0,0.211673582723883,0,0.280797178113459,0.228234679033192,0.156679895773023,0,0,0,0.60539912157314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| ||
|short_description=p8@RRBP1 | |||
}} | }} |
Latest revision as of 06:24, 20 September 2015
Short description: | p8@RRBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_RRBP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000495501_5end |
EntrezGene: | RRBP1 |
HGNC: | 10448 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.04e-10 | 12 |
enteric smooth muscle cell | 2.96e-08 | 3 |
smooth muscle cell of large intestine | 2.96e-08 | 3 |
smooth muscle cell of colon | 2.96e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 2.49e-11 | 19 |
digestive gland | 2.49e-11 | 19 |
liver bud | 2.49e-11 | 19 |
exocrine gland | 6.65e-11 | 31 |
exocrine system | 6.65e-11 | 31 |
gland | 1.62e-10 | 59 |
hepatic diverticulum | 1.72e-09 | 22 |
liver primordium | 1.72e-09 | 22 |
gut epithelium | 4.90e-09 | 54 |
digestive tract diverticulum | 5.51e-09 | 23 |
epithelial sac | 4.24e-08 | 25 |
epithelium of foregut-midgut junction | 4.24e-08 | 25 |
anatomical boundary | 4.24e-08 | 25 |
hepatobiliary system | 4.24e-08 | 25 |
foregut-midgut junction | 4.24e-08 | 25 |
septum transversum | 4.24e-08 | 25 |
sac | 1.04e-07 | 26 |
trunk mesenchyme | 5.73e-07 | 122 |
major salivary gland | 9.86e-07 | 2 |