FFCP PHASE1:Hg19::chr16:11680032..11680069,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9516 | |EntrezGene=9516 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16841 | |HGNC=16841 | ||
|TSSclassifier=strong | |||
|UniProt=Q99732 | |UniProt=Q99732 | ||
|association_with_transcript=159bp_to_ENST00000339430,NM_004862,uc002daz.2_5end | |association_with_transcript=159bp_to_ENST00000339430,NM_004862,uc002daz.2_5end | ||
|cluster_id=chr16:11680032..11680069,- | |||
|description=CAGE_peak_16_at_LITAF_5end | |description=CAGE_peak_16_at_LITAF_5end | ||
|id=chr16:11680032..11680069,- | |id=chr16:11680032..11680069,- | ||
|ontology_enrichment_celltype=CL:0000738!1.40e-23!140;CL:0002087!8.52e-22!119;CL:0002031!3.67e-21!124;CL:0000988!1.04e-18!182;CL:0000037!1.07e-17!172;CL:0000566!1.07e-17!172;CL:0002032!3.27e-17!165;CL:0000837!3.27e-17!165;CL:0000838!2.55e-13!52;CL:0000542!6.28e-13!53;CL:0000051!6.28e-13!53;CL:0000860!1.07e-10!45;CL:0000766!5.28e-10!76;CL:0002057!1.18e-09!42;CL:0000557!3.83e-09!71;CL:0002009!7.39e-09!65;CL:0000839!1.96e-08!70;CL:0002194!2.31e-08!63;CL:0000576!2.31e-08!63;CL:0000040!2.31e-08!63;CL:0000559!2.31e-08!63;CL:0000080!4.52e-08!6 | |ontology_enrichment_celltype=CL:0000738!1.40e-23!140;CL:0002087!8.52e-22!119;CL:0002031!3.67e-21!124;CL:0000988!1.04e-18!182;CL:0000037!1.07e-17!172;CL:0000566!1.07e-17!172;CL:0002032!3.27e-17!165;CL:0000837!3.27e-17!165;CL:0000838!2.55e-13!52;CL:0000542!6.28e-13!53;CL:0000051!6.28e-13!53;CL:0000860!1.07e-10!45;CL:0000766!5.28e-10!76;CL:0002057!1.18e-09!42;CL:0000557!3.83e-09!71;CL:0002009!7.39e-09!65;CL:0000839!1.96e-08!70;CL:0002194!2.31e-08!63;CL:0000576!2.31e-08!63;CL:0000040!2.31e-08!63;CL:0000559!2.31e-08!63;CL:0000080!4.52e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000771;1.82e-11;2!CL:0000081;3.03e-08;11!CL:0000945;4.92e-08;24!CL:0000236;5.59e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,1.82e-11,2;CL:0000081,3.03e-08,11;CL:0000945,4.63e-08,24;CL:0000826,4.63e-08,24;CL:0000988,9.21e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.38e-13!102;UBERON:0003061!2.38e-13!102;UBERON:0002193!6.62e-12!112;UBERON:0000178!1.84e-08!15;UBERON:0000179!1.84e-08!15;UBERON:0000463!1.84e-08!15;UBERON:0002371!4.66e-08!80;UBERON:0001474!5.11e-07!86 | |ontology_enrichment_uberon=UBERON:0002390!2.38e-13!102;UBERON:0003061!2.38e-13!102;UBERON:0002193!6.62e-12!112;UBERON:0000178!1.84e-08!15;UBERON:0000179!1.84e-08!15;UBERON:0000463!1.84e-08!15;UBERON:0002371!4.66e-08!80;UBERON:0001474!5.11e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.21e-18;10!UBERON:0000178;1.15e-12;15!UBERON:0000179;1.15e-12;15!UBERON:0000463;1.15e-12;15!UBERON:0000478;3.81e-08;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.21e-18,10;UBERON:0000358,1.21e-18,10;UBERON:0000307,1.21e-18,10;UBERON:0000091,1.21e-18,10;UBERON:0000087,1.21e-18,10;UBERON:0007010,1.21e-18,10;UBERON:0007806,1.21e-18,10;UBERON:0008780,1.21e-18,10;UBERON:0005728,1.21e-18,10;UBERON:0000178,1.15e-12,15;UBERON:0000179,1.15e-12,15;UBERON:0000463,1.15e-12,15;UBERON:0000478,3.81e-08,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.410502947249729,0.314843125254717,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.651032612147555,0,0.32389366601898,0,0,0,0,0.232429036905685,0.411167888021826,0.309706370895104,0.863077176966451,0,0.236482229888585,0.344745680736619,0.645484683583826,0,0,0,0,0.306083892370903,0,0.639337125799041,0,0,0,0.290209238628584,0,0.622822248995575,0,0.521482918420201,0,0,0.368277635987565,0.632924774881769,0.211255286311942,0.212604299965044,0.419317291016752,0,0,0,0,0,0,0,0,1.77901850772711,0,0,0,0,0,1.70763890732835,0,0,0,0,0,0.196709770113833,0.393010762749165,0.411202997999018,0,0,0,0,0.111410456885174,0,0.221533894583621,0.270803863765016,0.25618263945135,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0.253019692019503,0,0,0,0,0.255973222308837,0,0.236777252044017,0.821127996921047,0.201606743224732,0.802320587350522,0.724122019413995,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.196468613246569,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.75560528296651,0,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0.132529768321485,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0.591092280605782,0.646882724578552,0.641715181398742,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0.207970861530807,0.535286966391485,0,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,0,0,0,0.620304078368662,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576570202095319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0.411362273086194,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0.276283915531148,0,0,3.44637455290994,0,0,0.537063524026827,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0,0,2.96521128680622,4.94255755786011,4.9078316267564,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0.0967563312890851,0.146178634172371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0.203996435272644,0,0,0,0,0,0.262887354279314,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.202210631562555,0,0.0846733320657845,0,0,0,0,0,0.449947783103001,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,3.051222451857,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0.106787412567695,0,0.828478110694391,0,0,0.243585196761792,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0.163565394255844,0,0.245772908753719,0,0.39997479170986,0.213383459388282,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0.0887023701626388,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.129177819672012,0,0,0,0.202117188958219,0,0,0.0673520530145875,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0.320568492303233 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| ||
|short_description=p16@LITAF | |short_description=p16@LITAF | ||
}} | }} |
Latest revision as of 06:33, 20 September 2015
Short description: | p16@LITAF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_LITAF_5end |
Coexpression cluster: | NA |
Association with transcript: | 159bp_to_ENST00000339430, NM_004862, uc002daz.2_5end |
EntrezGene: | LITAF |
HGNC: | 16841 |
UniProt: | Q99732 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 1.82e-11 | 2 |
blood cell | 3.03e-08 | 11 |
lymphocyte of B lineage | 4.63e-08 | 24 |
pro-B cell | 4.63e-08 | 24 |
hematopoietic cell | 9.21e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.21e-18 | 10 |
blastocyst | 1.21e-18 | 10 |
blastula | 1.21e-18 | 10 |
bilaminar disc | 1.21e-18 | 10 |
inner cell mass | 1.21e-18 | 10 |
cleaving embryo | 1.21e-18 | 10 |
connecting stalk | 1.21e-18 | 10 |
inner cell mass derived epiblast | 1.21e-18 | 10 |
extraembryonic mesoderm | 1.21e-18 | 10 |
blood | 1.15e-12 | 15 |
haemolymphatic fluid | 1.15e-12 | 15 |
organism substance | 1.15e-12 | 15 |
extraembryonic structure | 3.81e-08 | 24 |