FFCP PHASE1:Hg19::chr1:207262478..207262493,+: Difference between revisions
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|id=chr1:207262478..207262493,+
|short_description=p14@C4BPB
|description=CAGE_peak_14_at_C4BPB_5end
|association_with_transcript=-64bp_to_ENST00000452902_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=725 | |EntrezGene=725 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1328 | |HGNC=1328 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VVQ7 | |UniProt=Q5VVQ7 | ||
|association_with_transcript=-64bp_to_ENST00000452902_5end | |||
|cluster_id=chr1:207262478..207262493,+ | |||
|coexpression_cluster_id=C106 | |||
|description=CAGE_peak_14_at_C4BPB_5end | |||
|id=chr1:207262478..207262493,+ | |||
|ontology_enrichment_celltype=CL:0002150!1.68e-19!3;CL:0000861!1.68e-19!3;CL:0000066!3.72e-08!254;CL:0000077!7.54e-08!19;CL:0000319!2.50e-07!1;CL:0002568!3.20e-07!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.04e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.54e-45;29!UBERON:0006595;3.85e-08;86 | |||
|ontology_enrichment_disease=DOID:305!2.13e-13!106;DOID:162!3.80e-09!235;DOID:0050687!5.04e-09!143;DOID:14566!7.36e-09!239;DOID:3030!2.50e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.45e-18,106;DOID:0050687,3.50e-13,143;DOID:162,1.32e-07,235;DOID:14566,1.99e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.70e-56!9;UBERON:0001557!6.77e-26!19;UBERON:0008947!6.52e-15!38;UBERON:0003258!6.52e-15!38;UBERON:0004921!5.00e-13!129;UBERON:0004185!5.00e-13!129;UBERON:0000072!5.27e-12!46;UBERON:0001041!4.29e-11!98;UBERON:0001007!3.33e-10!155;UBERON:0001555!3.33e-10!155;UBERON:0007026!3.33e-10!155;UBERON:0000065!3.50e-10!53;UBERON:0000077!3.80e-10!130;UBERON:0004119!4.81e-09!169;UBERON:0000925!4.81e-09!169;UBERON:0006595!4.81e-09!169;UBERON:0002107!1.36e-07!19;UBERON:0006925!1.36e-07!19;UBERON:0008836!1.36e-07!19;UBERON:0001282!3.62e-07!1;UBERON:0009842!3.62e-07!1;UBERON:0003704!3.62e-07!1;UBERON:0001171!3.62e-07!1;UBERON:0001172!3.62e-07!1;UBERON:0001004!4.96e-07!72;UBERON:0000063!5.60e-07!97 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.00e-147;9!UBERON:0001557;2.00e-147;9!UBERON:0000072;4.83e-33;37!UBERON:0000065;6.64e-28;44!UBERON:0001004;1.29e-14;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.84e-147,9;UBERON:0001557,1.02e-69,19;UBERON:0008947,1.17e-34,38;UBERON:0003258,1.17e-34,38;UBERON:0000072,6.34e-28,47;UBERON:0000065,3.11e-24,54;UBERON:0001041,2.81e-18,87;UBERON:0001004,1.60e-17,74;UBERON:0004921,3.72e-13,118;UBERON:0001007,1.44e-10,145;UBERON:0001555,1.44e-10,145;UBERON:0007026,1.44e-10,145;UBERON:0001048,1.45e-09,160;UBERON:0004119,1.68e-09,160;UBERON:0000925,1.68e-09,160;UBERON:0006595,1.68e-09,160 | |||
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|short_description=p14@C4BPB | |||
}} | }} |
Latest revision as of 07:10, 20 September 2015
Short description: | p14@C4BPB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_C4BPB_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | -64bp_to_ENST00000452902_5end |
EntrezGene: | C4BPB |
HGNC: | 1328 |
UniProt: | Q5VVQ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.04e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.84e-147 | 9 |
upper respiratory tract | 1.02e-69 | 19 |
respiratory primordium | 1.17e-34 | 38 |
endoderm of foregut | 1.17e-34 | 38 |
segment of respiratory tract | 6.34e-28 | 47 |
respiratory tract | 3.11e-24 | 54 |
foregut | 2.81e-18 | 87 |
respiratory system | 1.60e-17 | 74 |
subdivision of digestive tract | 3.72e-13 | 118 |
digestive system | 1.44e-10 | 145 |
digestive tract | 1.44e-10 | 145 |
primitive gut | 1.44e-10 | 145 |
primordium | 1.45e-09 | 160 |
endoderm-derived structure | 1.68e-09 | 160 |
endoderm | 1.68e-09 | 160 |
presumptive endoderm | 1.68e-09 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.45e-18 | 106 |
cell type cancer | 3.50e-13 | 143 |
cancer | 1.32e-07 | 235 |
disease of cellular proliferation | 1.99e-07 | 239 |