FFCP PHASE1:Hg19::chr2:217541259..217541290,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:217541259..217541290,-
|short_description=p16@IGFBP5
|description=CAGE_peak_16_at_IGFBP5_5end
|association_with_transcript=-414bp_to_AF147308_5end
|Entrez...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3488 | |EntrezGene=3488 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5474 | |HGNC=5474 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-414bp_to_AF147308_5end | |||
|cluster_id=chr2:217541259..217541290,- | |||
|coexpression_cluster_id=C252 | |||
|description=CAGE_peak_16_at_IGFBP5_5end | |||
|id=chr2:217541259..217541290,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002622;2.84e-07;3!CL:0000197;6.79e-07;6!CL:0000098;6.79e-07;6!CL:0002167;6.79e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002622,2.57e-07,3;CL:0000197,6.53e-07,6;CL:0000098,6.53e-07,6;CL:0002167,6.53e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0005062;2.82e-08;4!UBERON:0007284;2.82e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;4.65e-08;3!DOID:127;4.65e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,4.64e-08,3;DOID:127,4.64e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.19e-20!115;UBERON:0005156!1.84e-07!59;UBERON:0000990!1.84e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;1.57e-07;3!UBERON:0003101;7.66e-07;22!UBERON:0000079;7.66e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,1.26e-07,3;UBERON:0003101,6.19e-07,22;UBERON:0000079,6.19e-07,22 | |||
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| ||
|short_description=p16@IGFBP5 | |||
}} | }} |
Latest revision as of 07:10, 20 September 2015
Short description: | p16@IGFBP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_IGFBP5_5end |
Coexpression cluster: | C252_hepatic_Olfactory_sacrococcigeal_leiomyoma_normal_Synoviocyte_glioblastoma |
Association with transcript: | -414bp_to_AF147308_5end |
EntrezGene: | IGFBP5 |
HGNC: | 5474 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 2.57e-07 | 3 |
receptor cell | 6.53e-07 | 6 |
sensory epithelial cell | 6.53e-07 | 6 |
olfactory epithelial cell | 6.53e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 1.26e-07 | 3 |
male organism | 6.19e-07 | 22 |
male reproductive system | 6.19e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 4.64e-08 | 3 |
leiomyoma | 4.64e-08 | 3 |