FFCP PHASE1:Hg19::chr6:125367708..125367746,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=154214 | |EntrezGene=154214 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21487 | |HGNC=21487 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TC41 | |UniProt=Q8TC41 | ||
|association_with_transcript=0bp_to_ENST00000368415_5end | |association_with_transcript=0bp_to_ENST00000368415_5end | ||
|cluster_id=chr6:125367708..125367746,+ | |||
|coexpression_cluster_id=C2198 | |coexpression_cluster_id=C2198 | ||
|description=CAGE_peak_13_at_RNF217_5end | |description=CAGE_peak_13_at_RNF217_5end | ||
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|ontology_enrichment_celltype=CL:0002076!9.28e-15!43;CL:0002159!4.41e-14!13;CL:0000066!6.47e-13!254;CL:0000223!2.21e-12!59;CL:0002251!1.62e-11!21;CL:0002541!2.03e-10!3;CL:0002166!3.29e-10!3;CL:0002621!1.70e-09!3;CL:0000244!1.82e-07!4;CL:0000731!1.82e-07!4;CL:0000317!3.23e-07!2;CL:1000448!3.23e-07!2;CL:0002308!3.23e-07!2;CL:0002140!3.23e-07!2;CL:0002077!5.54e-07!33;CL:0002536!8.27e-07!2 | |ontology_enrichment_celltype=CL:0002076!9.28e-15!43;CL:0002159!4.41e-14!13;CL:0000066!6.47e-13!254;CL:0000223!2.21e-12!59;CL:0002251!1.62e-11!21;CL:0002541!2.03e-10!3;CL:0002166!3.29e-10!3;CL:0002621!1.70e-09!3;CL:0000244!1.82e-07!4;CL:0000731!1.82e-07!4;CL:0000317!3.23e-07!2;CL:1000448!3.23e-07!2;CL:0002308!3.23e-07!2;CL:0002140!3.23e-07!2;CL:0002077!5.54e-07!33;CL:0002536!8.27e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002159;2.19e-26;14!CL:0002541;9.82e-25;3!CL:0002166;6.50e-24;3!CL:0000349;1.22e-19;19!CL:0000317;2.03e-16;2!CL:1000448;2.03e-16;2!CL:0002308;2.03e-16;2!CL:0002140;2.03e-16;2!CL:0002537;6.14e-15;5!CL:0000622;2.36e-14;5!CL:0000362;4.68e-14;9!CL:0000154;4.70e-12;6!CL:0000307;5.71e-11;3!CL:0002077;2.63e-09;34!CL:0000244;1.05e-08;4!CL:0000731;1.05e-08;4!CL:0000150;3.33e-08;9!CL:0000312;3.36e-07;5 | |ontology_enrichment_celltype_v019=CL:0002159;2.19e-26;14!CL:0002541;9.82e-25;3!CL:0002166;6.50e-24;3!CL:0000349;1.22e-19;19!CL:0000317;2.03e-16;2!CL:1000448;2.03e-16;2!CL:0002308;2.03e-16;2!CL:0002140;2.03e-16;2!CL:0002537;6.14e-15;5!CL:0000622;2.36e-14;5!CL:0000362;4.68e-14;9!CL:0000154;4.70e-12;6!CL:0000307;5.71e-11;3!CL:0002077;2.63e-09;34!CL:0000244;1.05e-08;4!CL:0000731;1.05e-08;4!CL:0000150;3.33e-08;9!CL:0000312;3.36e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002159,1.78e-26,14;CL:0002541,1.02e-24,3;CL:0002166,3.62e-24,3;CL:0000349,1.27e-19,19;CL:0000317,2.37e-16,2;CL:1000448,2.37e-16,2;CL:0002308,2.37e-16,2;CL:0002140,2.37e-16,2;CL:0002537,6.29e-15,5;CL:0000622,2.31e-14,5;CL:0000362,5.02e-14,9;CL:0000154,4.61e-12,6;CL:0000068,6.65e-11,3;CL:0000069,6.65e-11,3;CL:0000307,6.65e-11,3;CL:0000377,6.65e-11,3;CL:0002077,1.88e-10,34;CL:0000244,1.07e-08,4;CL:0000731,1.07e-08,4;CL:0000150,3.29e-08,9;CL:0002076,5.36e-08,42;CL:0000312,3.36e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000377;5.71e-11;3!UBERON:0003124;7.55e-09;1 | |ontology_enrichment_development_v019=CL:0000377;5.71e-11;3!UBERON:0003124;7.55e-09;1 | ||
|ontology_enrichment_disease=DOID:1749!2.55e-11!14 | |ontology_enrichment_disease=DOID:1749!2.55e-11!14 | ||
|ontology_enrichment_disease_v019=DOID:178;4.36e-09;1!DOID:326;4.36e-09;1!DOID:3978;4.36e-09;1!DOID:3394;4.36e-09;1!DOID:5844;4.36e-09;1 | |ontology_enrichment_disease_v019=DOID:178;4.36e-09;1!DOID:326;4.36e-09;1!DOID:3978;4.36e-09;1!DOID:3394;4.36e-09;1!DOID:5844;4.36e-09;1 | ||
|ontology_enrichment_disease_v019_2=DOID:178,4.19e-09,1;DOID:326,4.19e-09,1;DOID:3978,4.19e-09,1;DOID:3394,4.19e-09,1;DOID:5844,4.19e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.48e-16!14;UBERON:0000158!1.48e-16!14;UBERON:0000974!1.88e-12!10;UBERON:0003343!1.87e-11!4;UBERON:0004785!1.87e-11!4;UBERON:0000305!6.65e-11!7;UBERON:0000476!2.03e-10!3;UBERON:0000920!2.03e-10!3;UBERON:0001949!1.70e-09!3;UBERON:0004871!1.75e-09!8;UBERON:0000166!2.48e-09!21;UBERON:0003729!3.62e-09!5;UBERON:0000478!7.47e-09!24;UBERON:0001004!3.97e-08!72;UBERON:0001708!9.86e-08!4;UBERON:0001704!9.86e-08!4;UBERON:0003124!1.79e-07!7;UBERON:0000161!1.81e-07!35;UBERON:0002419!3.23e-07!2;UBERON:0007771!3.23e-07!2;UBERON:0003297!3.23e-07!2;UBERON:0001821!3.23e-07!2;UBERON:0003487!3.23e-07!2;UBERON:0001820!3.23e-07!2;UBERON:0005089!3.23e-07!2;UBERON:0005088!3.23e-07!2;UBERON:0004923!6.66e-07!57 | |ontology_enrichment_uberon=UBERON:0005631!1.48e-16!14;UBERON:0000158!1.48e-16!14;UBERON:0000974!1.88e-12!10;UBERON:0003343!1.87e-11!4;UBERON:0004785!1.87e-11!4;UBERON:0000305!6.65e-11!7;UBERON:0000476!2.03e-10!3;UBERON:0000920!2.03e-10!3;UBERON:0001949!1.70e-09!3;UBERON:0004871!1.75e-09!8;UBERON:0000166!2.48e-09!21;UBERON:0003729!3.62e-09!5;UBERON:0000478!7.47e-09!24;UBERON:0001004!3.97e-08!72;UBERON:0001708!9.86e-08!4;UBERON:0001704!9.86e-08!4;UBERON:0003124!1.79e-07!7;UBERON:0000161!1.81e-07!35;UBERON:0002419!3.23e-07!2;UBERON:0007771!3.23e-07!2;UBERON:0003297!3.23e-07!2;UBERON:0001821!3.23e-07!2;UBERON:0003487!3.23e-07!2;UBERON:0001820!3.23e-07!2;UBERON:0005089!3.23e-07!2;UBERON:0005088!3.23e-07!2;UBERON:0004923!6.66e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;5.78e-38;10!UBERON:0000158;5.78e-38;10!UBERON:0003124;9.82e-25;3!UBERON:0000920;9.82e-25;3!UBERON:0000478;7.01e-20;24!UBERON:0000305;3.67e-18;7!UBERON:0001708;4.28e-18;4!UBERON:0008895;4.28e-18;4!UBERON:0002419;2.03e-16;2!UBERON:0007771;2.03e-16;2!UBERON:0003297;2.03e-16;2!UBERON:0001821;2.03e-16;2!UBERON:0003487;2.03e-16;2!UBERON:0001820;2.03e-16;2!UBERON:0011159;1.36e-14;5!UBERON:0001003;1.70e-08;15!UBERON:0007376;1.70e-08;15!UBERON:0000365;3.97e-07;5!UBERON:0011137;6.71e-07;11!UBERON:0010323;6.71e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0005631;5.78e-38;10!UBERON:0000158;5.78e-38;10!UBERON:0003124;9.82e-25;3!UBERON:0000920;9.82e-25;3!UBERON:0000478;7.01e-20;24!UBERON:0000305;3.67e-18;7!UBERON:0001708;4.28e-18;4!UBERON:0008895;4.28e-18;4!UBERON:0002419;2.03e-16;2!UBERON:0007771;2.03e-16;2!UBERON:0003297;2.03e-16;2!UBERON:0001821;2.03e-16;2!UBERON:0003487;2.03e-16;2!UBERON:0001820;2.03e-16;2!UBERON:0011159;1.36e-14;5!UBERON:0001003;1.70e-08;15!UBERON:0007376;1.70e-08;15!UBERON:0000365;3.97e-07;5!UBERON:0011137;6.71e-07;11!UBERON:0010323;6.71e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.58e-35,14;UBERON:0000158,7.58e-35,14;UBERON:0000920,1.02e-24,3;UBERON:0000478,6.68e-20,24;UBERON:0003124,2.36e-18,7;UBERON:0001708,2.76e-18,4;UBERON:0008895,2.76e-18,4;UBERON:0000305,3.84e-18,7;UBERON:0002419,2.37e-16,2;UBERON:0007771,2.37e-16,2;UBERON:0003297,2.37e-16,2;UBERON:0001821,2.37e-16,2;UBERON:0003487,2.37e-16,2;UBERON:0001820,2.37e-16,2;UBERON:0005089,2.37e-16,2;UBERON:0005088,2.37e-16,2;UBERON:0004871,6.66e-16,8;UBERON:0011159,9.58e-15,5;UBERON:0010188,2.23e-12,6;UBERON:0002539,2.23e-12,6;UBERON:0008816,2.23e-12,6;UBERON:0004923,3.57e-10,66;UBERON:0001003,1.77e-08,15;UBERON:0007376,1.77e-08,15;UBERON:0007383,1.77e-08,15;UBERON:0003102,1.50e-07,99;UBERON:0000365,4.04e-07,5;UBERON:0010323,5.76e-07,11 | |||
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| ||
|short_description=p13@RNF217 | |short_description=p13@RNF217 | ||
}} | }} |
Latest revision as of 07:10, 20 September 2015
Short description: | p13@RNF217 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_RNF217_5end |
Coexpression cluster: | C2198_amniotic_chorionic_Urothelial_Mallassezderived_Keratinocyte_Sebocyte_Prostate |
Association with transcript: | 0bp_to_ENST00000368415_5end |
EntrezGene: | RNF217 |
HGNC: | 21487 |
UniProt: | Q8TC41 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 1.78e-26 | 14 |
chorionic membrane mesenchymal stem cell | 1.02e-24 | 3 |
epithelial cell of Malassez | 3.62e-24 | 3 |
extraembryonic cell | 1.27e-19 | 19 |
sebum secreting cell | 2.37e-16 | 2 |
epithelial cell of sweat gland | 2.37e-16 | 2 |
epithelial cell of skin gland | 2.37e-16 | 2 |
acinar cell of sebaceous gland | 2.37e-16 | 2 |
amnion mesenchymal stem cell | 6.29e-15 | 5 |
acinar cell | 2.31e-14 | 5 |
epidermal cell | 5.02e-14 | 9 |
protein secreting cell | 4.61e-12 | 6 |
duct epithelial cell | 6.65e-11 | 3 |
branched duct epithelial cell | 6.65e-11 | 3 |
tracheal epithelial cell | 6.65e-11 | 3 |
tracheoblast | 6.65e-11 | 3 |
ecto-epithelial cell | 1.88e-10 | 34 |
transitional epithelial cell | 1.07e-08 | 4 |
urothelial cell | 1.07e-08 | 4 |
glandular epithelial cell | 3.29e-08 | 9 |
endo-epithelial cell | 5.36e-08 | 42 |
keratinocyte | 3.36e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.58e-35 | 14 |
membranous layer | 7.58e-35 | 14 |
egg chorion | 1.02e-24 | 3 |
extraembryonic structure | 6.68e-20 | 24 |
chorion | 2.36e-18 | 7 |
jaw skeleton | 2.76e-18 | 4 |
splanchnocranium | 2.76e-18 | 4 |
amnion | 3.84e-18 | 7 |
skin gland | 2.37e-16 | 2 |
epidermis gland | 2.37e-16 | 2 |
gland of integumental system | 2.37e-16 | 2 |
sebaceous gland | 2.37e-16 | 2 |
skin sebaceous gland | 2.37e-16 | 2 |
sweat gland | 2.37e-16 | 2 |
sweat gland placode | 2.37e-16 | 2 |
sebaceous gland placode | 2.37e-16 | 2 |
somatic layer of lateral plate mesoderm | 6.66e-16 | 8 |
primary subdivision of cranial skeletal system | 9.58e-15 | 5 |
protuberance | 2.23e-12 | 6 |
pharyngeal arch | 2.23e-12 | 6 |
embryonic head | 2.23e-12 | 6 |
organ component layer | 3.57e-10 | 66 |
skin epidermis | 1.77e-08 | 15 |
outer epithelium | 1.77e-08 | 15 |
enveloping layer of ectoderm | 1.77e-08 | 15 |
surface structure | 1.50e-07 | 99 |
urothelium | 4.04e-07 | 5 |
cranial skeletal system | 5.76e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 4.19e-09 | 1 |
ischemia | 4.19e-09 | 1 |
extrinsic cardiomyopathy | 4.19e-09 | 1 |
myocardial ischemia | 4.19e-09 | 1 |
myocardial infarction | 4.19e-09 | 1 |