FFCP PHASE1:Hg19::chr1:207262571..207262574,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=725 | |EntrezGene=725 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1328 | |HGNC=1328 | ||
|TSSclassifier=strong | |||
|UniProt=P20851 | |UniProt=P20851 | ||
|association_with_transcript=-8bp_to_ENST00000243611_5end | |association_with_transcript=-8bp_to_ENST00000243611_5end | ||
|cluster_id=chr1:207262571..207262574,+ | |||
|coexpression_cluster_id=C129 | |coexpression_cluster_id=C129 | ||
|description=CAGE_peak_19_at_C4BPB_5end | |description=CAGE_peak_19_at_C4BPB_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000181!1.25e-28!12;CL:0000417!1.25e-28!12;CL:0000668!1.25e-28!12;CL:0000414!1.25e-28!12;CL:0000412!1.25e-28!12;CL:0000182!1.25e-28!12;CL:0000223!6.32e-12!59 | |ontology_enrichment_celltype=CL:0000181!1.25e-28!12;CL:0000417!1.25e-28!12;CL:0000668!1.25e-28!12;CL:0000414!1.25e-28!12;CL:0000412!1.25e-28!12;CL:0000182!1.25e-28!12;CL:0000223!6.32e-12!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;8.72e-22;12 | |ontology_enrichment_celltype_v019=CL:0000182;8.72e-22;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.83e-22,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.07e-11;11!UBERON:0009497;8.34e-10;13 | |ontology_enrichment_development_v019=UBERON:0004161;2.07e-11;11!UBERON:0009497;8.34e-10;13 | ||
|ontology_enrichment_disease=DOID:305!2.13e-07!106;DOID:170!4.05e-07!6 | |ontology_enrichment_disease=DOID:305!2.13e-07!106;DOID:170!4.05e-07!6 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!8.80e-32!19;UBERON:0006925!8.80e-32!19;UBERON:0008836!8.80e-32!19;UBERON:0008835!2.50e-27!22;UBERON:0003894!2.50e-27!22;UBERON:0009854!4.22e-26!23;UBERON:0007499!6.10e-24!25;UBERON:0009497!6.10e-24!25;UBERON:0000015!6.10e-24!25;UBERON:0002423!6.10e-24!25;UBERON:0006235!6.10e-24!25;UBERON:0004161!6.10e-24!25;UBERON:0005057!5.51e-23!26;UBERON:0009856!5.51e-23!26;UBERON:0002368!3.34e-21!35;UBERON:0000949!6.03e-20!45;UBERON:0002365!3.97e-19!31;UBERON:0002330!3.97e-19!31;UBERON:0001737!7.10e-17!9;UBERON:0003929!1.83e-16!54;UBERON:0002530!6.33e-15!59;UBERON:0001041!2.06e-14!98;UBERON:0004921!3.88e-14!129;UBERON:0004185!3.88e-14!129;UBERON:0005172!4.73e-13!55;UBERON:0005173!4.73e-13!55;UBERON:0000077!3.70e-12!130;UBERON:0002417!1.21e-11!61;UBERON:0000916!1.21e-11!61;UBERON:0001007!2.25e-11!155;UBERON:0001555!2.25e-11!155;UBERON:0007026!2.25e-11!155;UBERON:0005911!2.45e-10!82;UBERON:0004119!3.10e-10!169;UBERON:0000925!3.10e-10!169;UBERON:0006595!3.10e-10!169;UBERON:0001048!7.37e-09!168;UBERON:0001557!4.18e-08!19;UBERON:0005177!1.56e-07!107 | |ontology_enrichment_uberon=UBERON:0002107!8.80e-32!19;UBERON:0006925!8.80e-32!19;UBERON:0008836!8.80e-32!19;UBERON:0008835!2.50e-27!22;UBERON:0003894!2.50e-27!22;UBERON:0009854!4.22e-26!23;UBERON:0007499!6.10e-24!25;UBERON:0009497!6.10e-24!25;UBERON:0000015!6.10e-24!25;UBERON:0002423!6.10e-24!25;UBERON:0006235!6.10e-24!25;UBERON:0004161!6.10e-24!25;UBERON:0005057!5.51e-23!26;UBERON:0009856!5.51e-23!26;UBERON:0002368!3.34e-21!35;UBERON:0000949!6.03e-20!45;UBERON:0002365!3.97e-19!31;UBERON:0002330!3.97e-19!31;UBERON:0001737!7.10e-17!9;UBERON:0003929!1.83e-16!54;UBERON:0002530!6.33e-15!59;UBERON:0001041!2.06e-14!98;UBERON:0004921!3.88e-14!129;UBERON:0004185!3.88e-14!129;UBERON:0005172!4.73e-13!55;UBERON:0005173!4.73e-13!55;UBERON:0000077!3.70e-12!130;UBERON:0002417!1.21e-11!61;UBERON:0000916!1.21e-11!61;UBERON:0001007!2.25e-11!155;UBERON:0001555!2.25e-11!155;UBERON:0007026!2.25e-11!155;UBERON:0005911!2.45e-10!82;UBERON:0004119!3.10e-10!169;UBERON:0000925!3.10e-10!169;UBERON:0006595!3.10e-10!169;UBERON:0001048!7.37e-09!168;UBERON:0001557!4.18e-08!19;UBERON:0005177!1.56e-07!107 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.14e-37;19!UBERON:0006925;2.14e-37;19!UBERON:0002423;1.47e-28;25!UBERON:0002365;4.69e-23;31!UBERON:0002330;4.69e-23;31!UBERON:0002368;6.31e-20;33!UBERON:0000949;1.96e-14;43!UBERON:0005172;2.08e-10;52!UBERON:0005173;2.08e-10;52!UBERON:0002417;4.67e-08;58!UBERON:0000916;4.67e-08;58!UBERON:0002530;1.39e-07;57!UBERON:0001007;1.80e-07;81 | |ontology_enrichment_uberon_v019=UBERON:0002107;2.14e-37;19!UBERON:0006925;2.14e-37;19!UBERON:0002423;1.47e-28;25!UBERON:0002365;4.69e-23;31!UBERON:0002330;4.69e-23;31!UBERON:0002368;6.31e-20;33!UBERON:0000949;1.96e-14;43!UBERON:0005172;2.08e-10;52!UBERON:0005173;2.08e-10;52!UBERON:0002417;4.67e-08;58!UBERON:0000916;4.67e-08;58!UBERON:0002530;1.39e-07;57!UBERON:0001007;1.80e-07;81 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.91e-37,19;UBERON:0006925,1.91e-37,19;UBERON:0008836,1.91e-37,19;UBERON:0008835,2.03e-32,22;UBERON:0003894,2.03e-32,22;UBERON:0009854,4.92e-31,23;UBERON:0007499,1.35e-28,25;UBERON:0009497,1.35e-28,25;UBERON:0000015,1.35e-28,25;UBERON:0002423,1.35e-28,25;UBERON:0006235,1.35e-28,25;UBERON:0004161,1.35e-28,25;UBERON:0009856,1.62e-27,26;UBERON:0002365,3.66e-23,31;UBERON:0002330,3.66e-23,31;UBERON:0002368,1.43e-20,35;UBERON:0000949,4.25e-16,45;UBERON:0003929,1.76e-13,54;UBERON:0005172,1.76e-13,54;UBERON:0005173,1.76e-13,54;UBERON:0002530,2.28e-12,59;UBERON:0002417,3.62e-12,60;UBERON:0000916,3.62e-12,60;UBERON:0005911,5.51e-09,82;UBERON:0001041,1.75e-08,87;UBERON:0005177,2.43e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,2.53510069643662,2.94848165003288,3.54473944008842,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47298427954533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10674542563371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472699093843342,0.741742725430498,0.741438982396034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25001477666439,5.30027555648885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,2.53510069643662,2.94848165003288,3.54473944008842,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47298427954533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10674542563371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472699093843342,0.741742725430498,0.741438982396034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25001477666439,5.30027555648885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p19@C4BPB | |short_description=p19@C4BPB | ||
}} | }} |
Latest revision as of 07:12, 20 September 2015
Short description: | p19@C4BPB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_C4BPB_5end |
Coexpression cluster: | C129_liver_Hepatocyte_colon_duodenum_temporal_testicular_small |
Association with transcript: | -8bp_to_ENST00000243611_5end |
EntrezGene: | C4BPB |
HGNC: | 1328 |
UniProt: | P20851 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.83e-22 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.91e-37 | 19 |
digestive gland | 1.91e-37 | 19 |
liver bud | 1.91e-37 | 19 |
hepatic diverticulum | 2.03e-32 | 22 |
liver primordium | 2.03e-32 | 22 |
digestive tract diverticulum | 4.92e-31 | 23 |
epithelial sac | 1.35e-28 | 25 |
epithelium of foregut-midgut junction | 1.35e-28 | 25 |
anatomical boundary | 1.35e-28 | 25 |
hepatobiliary system | 1.35e-28 | 25 |
foregut-midgut junction | 1.35e-28 | 25 |
septum transversum | 1.35e-28 | 25 |
sac | 1.62e-27 | 26 |
exocrine gland | 3.66e-23 | 31 |
exocrine system | 3.66e-23 | 31 |
endocrine gland | 1.43e-20 | 35 |
endocrine system | 4.25e-16 | 45 |
gut epithelium | 1.76e-13 | 54 |
abdomen element | 1.76e-13 | 54 |
abdominal segment element | 1.76e-13 | 54 |
gland | 2.28e-12 | 59 |
abdominal segment of trunk | 3.62e-12 | 60 |
abdomen | 3.62e-12 | 60 |
endo-epithelium | 5.51e-09 | 82 |
foregut | 1.75e-08 | 87 |
trunk region element | 2.43e-07 | 101 |