FFCP PHASE1:Hg19::chr1:207262856..207262880,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=725 | |EntrezGene=725 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1328 | |HGNC=1328 | ||
|TSSclassifier=strong | |||
|UniProt=E7EQT9 | |UniProt=E7EQT9 | ||
|association_with_transcript=-6bp_to_ENST00000451804_5end | |association_with_transcript=-6bp_to_ENST00000451804_5end | ||
|cluster_id=chr1:207262856..207262880,+ | |||
|coexpression_cluster_id=C106 | |coexpression_cluster_id=C106 | ||
|description=CAGE_peak_8_at_C4BPB_5end | |description=CAGE_peak_8_at_C4BPB_5end | ||
|id=chr1:207262856..207262880,+ | |id=chr1:207262856..207262880,+ | ||
|ontology_enrichment_celltype=CL:0000181!3.89e-13!12;CL:0000417!3.89e-13!12;CL:0000668!3.89e-13!12;CL:0000414!3.89e-13!12;CL:0000412!3.89e-13!12;CL:0000182!3.89e-13!12;CL:0002541!3.16e-09!3;CL:0000066!6.75e-09!254;CL:0002150!1.01e-08!3;CL:0000861!1.01e-08!3 | |ontology_enrichment_celltype=CL:0000181!3.89e-13!12;CL:0000417!3.89e-13!12;CL:0000668!3.89e-13!12;CL:0000414!3.89e-13!12;CL:0000412!3.89e-13!12;CL:0000182!3.89e-13!12;CL:0002541!3.16e-09!3;CL:0000066!6.75e-09!254;CL:0002150!1.01e-08!3;CL:0000861!1.01e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.01e-21;12!CL:0002541;1.65e-17;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.04e-21,12;CL:0002541,1.79e-17,3;CL:0000066,4.61e-10,253;CL:0000223,1.62e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0009497;5.53e-19;13!UBERON:0004161;9.15e-17;11!UBERON:0008947;1.65e-14;29!UBERON:0003104;5.07e-10;31!UBERON:0001041;9.53e-08;30!UBERON:0006595;3.52e-07;86 | |||
|ontology_enrichment_disease=DOID:305!1.02e-18!106;DOID:0050687!1.87e-13!143;DOID:162!1.34e-11!235;DOID:14566!4.05e-11!239 | |ontology_enrichment_disease=DOID:305!1.02e-18!106;DOID:0050687!1.87e-13!143;DOID:162!1.34e-11!235;DOID:14566!4.05e-11!239 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.89e-16,106;DOID:0050687,7.57e-11,143;DOID:162,4.02e-08,235;DOID:14566,7.52e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!6.06e-25!9;UBERON:0009497!1.12e-19!25;UBERON:0000015!1.12e-19!25;UBERON:0002423!1.12e-19!25;UBERON:0006235!1.12e-19!25;UBERON:0004161!1.12e-19!25;UBERON:0008835!2.35e-17!22;UBERON:0003894!2.35e-17!22;UBERON:0009854!1.87e-16!23;UBERON:0000077!4.13e-15!130;UBERON:0007499!7.12e-15!25;UBERON:0009856!3.55e-14!26;UBERON:0004921!4.36e-13!129;UBERON:0004185!4.36e-13!129;UBERON:0004119!1.06e-12!169;UBERON:0000925!1.06e-12!169;UBERON:0006595!1.06e-12!169;UBERON:0001041!2.24e-12!98;UBERON:0003929!2.55e-12!54;UBERON:0002107!2.97e-12!19;UBERON:0006925!2.97e-12!19;UBERON:0008836!2.97e-12!19;UBERON:0001007!6.63e-12!155;UBERON:0001555!6.63e-12!155;UBERON:0007026!6.63e-12!155;UBERON:0001557!1.04e-10!19;UBERON:0003124!1.84e-09!7;UBERON:0000476!3.16e-09!3;UBERON:0000920!3.16e-09!3;UBERON:0005631!2.06e-08!14;UBERON:0000158!2.06e-08!14;UBERON:0005057!2.34e-08!26;UBERON:0002294!2.47e-08!7;UBERON:0001173!2.47e-08!7;UBERON:0004912!2.47e-08!7;UBERON:0002368!3.20e-08!35;UBERON:0005911!2.18e-07!82;UBERON:0005172!6.21e-07!55;UBERON:0005173!6.21e-07!55;UBERON:0000949!7.02e-07!45 | |ontology_enrichment_uberon=UBERON:0001737!6.06e-25!9;UBERON:0009497!1.12e-19!25;UBERON:0000015!1.12e-19!25;UBERON:0002423!1.12e-19!25;UBERON:0006235!1.12e-19!25;UBERON:0004161!1.12e-19!25;UBERON:0008835!2.35e-17!22;UBERON:0003894!2.35e-17!22;UBERON:0009854!1.87e-16!23;UBERON:0000077!4.13e-15!130;UBERON:0007499!7.12e-15!25;UBERON:0009856!3.55e-14!26;UBERON:0004921!4.36e-13!129;UBERON:0004185!4.36e-13!129;UBERON:0004119!1.06e-12!169;UBERON:0000925!1.06e-12!169;UBERON:0006595!1.06e-12!169;UBERON:0001041!2.24e-12!98;UBERON:0003929!2.55e-12!54;UBERON:0002107!2.97e-12!19;UBERON:0006925!2.97e-12!19;UBERON:0008836!2.97e-12!19;UBERON:0001007!6.63e-12!155;UBERON:0001555!6.63e-12!155;UBERON:0007026!6.63e-12!155;UBERON:0001557!1.04e-10!19;UBERON:0003124!1.84e-09!7;UBERON:0000476!3.16e-09!3;UBERON:0000920!3.16e-09!3;UBERON:0005631!2.06e-08!14;UBERON:0000158!2.06e-08!14;UBERON:0005057!2.34e-08!26;UBERON:0002294!2.47e-08!7;UBERON:0001173!2.47e-08!7;UBERON:0004912!2.47e-08!7;UBERON:0002368!3.20e-08!35;UBERON:0005911!2.18e-07!82;UBERON:0005172!6.21e-07!55;UBERON:0005173!6.21e-07!55;UBERON:0000949!7.02e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.14e-50;9!UBERON:0001557;3.14e-50;9!UBERON:0002107;1.41e-21;19!UBERON:0006925;1.41e-21;19!UBERON:0002423;9.69e-20;25!UBERON:0003124;1.65e-17;3!UBERON:0000920;1.65e-17;3!UBERON:0002368;6.57e-13;33!UBERON:0002365;2.65e-12;31!UBERON:0002330;2.65e-12;31!UBERON:0000072;1.69e-10;37!UBERON:0000949;2.24e-09;43!UBERON:0005631;5.28e-09;10!UBERON:0000158;5.28e-09;10!UBERON:0000065;7.36e-09;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.74e-50,9;UBERON:0001557,5.24e-23,19;UBERON:0008835,1.21e-22,22;UBERON:0003894,1.21e-22,22;UBERON:0009854,1.39e-21,23;UBERON:0002107,1.70e-21,19;UBERON:0006925,1.70e-21,19;UBERON:0008836,1.70e-21,19;UBERON:0007499,1.03e-19,25;UBERON:0009497,1.03e-19,25;UBERON:0000015,1.03e-19,25;UBERON:0002423,1.03e-19,25;UBERON:0006235,1.03e-19,25;UBERON:0004161,1.03e-19,25;UBERON:0004921,1.30e-19,118;UBERON:0009856,6.93e-19,26;UBERON:0001041,8.43e-19,87;UBERON:0000920,1.79e-17,3;UBERON:0001007,4.65e-15,145;UBERON:0001555,4.65e-15,145;UBERON:0007026,4.65e-15,145;UBERON:0003929,3.34e-14,54;UBERON:0002368,1.55e-13,35;UBERON:0004119,3.43e-13,160;UBERON:0000925,3.43e-13,160;UBERON:0006595,3.43e-13,160;UBERON:0002365,1.35e-12,31;UBERON:0002330,1.35e-12,31;UBERON:0008947,1.04e-10,38;UBERON:0003258,1.04e-10,38;UBERON:0000949,3.90e-10,45;UBERON:0002530,6.12e-09,59;UBERON:0005911,1.79e-08,82;UBERON:0000072,2.32e-08,47;UBERON:0001048,2.37e-08,160;UBERON:0005172,3.72e-08,54;UBERON:0005173,3.72e-08,54;UBERON:0011216,6.25e-08,223;UBERON:0003124,9.32e-08,7;UBERON:0002417,3.61e-07,60;UBERON:0000916,3.61e-07,60;UBERON:0000065,4.44e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1743848034266,7.58631105351458,8.43538604592187,10.919103300507,8.71517776369625,10.4399072408883,10.3820107283327,7.84885860501384,6.92544882503503,0,0,0,0,7.60530208930985,6.87979051674338,12.4065880403095,0,3.07471096357784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,3.86750238693191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67906630284078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60044461320525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426851060090485,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0,0,0,0,1.90995587790152,0.890894042497916,0,0,0,0,0,0,0,0,0,0,0.615424027305347,0,1.70749867179921,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50558466093677,0,0,0,0.69169171316418,0,0.217294743844016,8.29403015302991,5.49585560411174,5.86338253620498,0,0,0,0,0,0,0,0,0,0,4.38194521445217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,1.45134496933628,1.68105429298227,2.38134825454307,0,0,0,0,0,0,0,0.0801588202515337,0.213452994739353,0.19980960958213,0.144090417154106,0,0.171594997861965,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,1.10296455230113,1.483485450861,1.07845670166696,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51725360827398,3.97520666736664,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,1.28664954824955,0,3.17388295717181,0,0.734210113519403,0.179088841081487,0,1.09642024789354,0,0,0,0,0,0.607719912354764,0,0,0,0.327130788511688,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0.0752103283492573,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0.111231401892069,0,0,8.40816489941367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609589624911347,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0.320182037633146,0,0.359300808426348,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1743848034266,7.58631105351458,8.43538604592187,10.919103300507,8.71517776369625,10.4399072408883,10.3820107283327,7.84885860501384,6.92544882503503,0,0,0,0,7.60530208930985,6.87979051674338,12.4065880403095,0,3.07471096357784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,3.86750238693191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67906630284078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60044461320525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426851060090485,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0,0,0,0,1.90995587790152,0.890894042497916,0,0,0,0,0,0,0,0,0,0,0.615424027305347,0,1.70749867179921,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50558466093677,0,0,0,0.69169171316418,0,0.217294743844016,8.29403015302991,5.49585560411174,5.86338253620498,0,0,0,0,0,0,0,0,0,0,4.38194521445217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,1.45134496933628,1.68105429298227,2.38134825454307,0,0,0,0,0,0,0,0.0801588202515337,0.213452994739353,0.19980960958213,0.144090417154106,0,0.171594997861965,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,1.10296455230113,1.483485450861,1.07845670166696,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51725360827398,3.97520666736664,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,1.28664954824955,0,3.17388295717181,0,0.734210113519403,0.179088841081487,0,1.09642024789354,0,0,0,0,0,0.607719912354764,0,0,0,0.327130788511688,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0.0752103283492573,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0.111231401892069,0,0,8.40816489941367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609589624911347,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0.320182037633146,0,0.359300808426348,0,0,0,0,0,0 | ||
|short_description=p8@C4BPB | |short_description=p8@C4BPB | ||
}} | }} |
Latest revision as of 07:16, 20 September 2015
Short description: | p8@C4BPB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_C4BPB_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | -6bp_to_ENST00000451804_5end |
EntrezGene: | C4BPB |
HGNC: | 1328 |
UniProt: | E7EQT9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.04e-21 | 12 |
chorionic membrane mesenchymal stem cell | 1.79e-17 | 3 |
epithelial cell | 4.61e-10 | 253 |
endodermal cell | 1.62e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.89e-16 | 106 |
cell type cancer | 7.57e-11 | 143 |
cancer | 4.02e-08 | 235 |
disease of cellular proliferation | 7.52e-08 | 239 |