FFCP PHASE1:Hg19::chr16:11922644..11922651,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=400500 | |EntrezGene=400500 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=22170 | |HGNC=22170 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=37bp_to_ENST00000505806,NR_024049,NR_024050,uc002dbo.2,uc010uyv.1_5end | |association_with_transcript=37bp_to_ENST00000505806,NR_024049,NR_024050,uc002dbo.2,uc010uyv.1_5end | ||
|cluster_id=chr16:11922644..11922651,- | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_3_at_BCAR4_5end | |description=CAGE_peak_3_at_BCAR4_5end | ||
|id=chr16:11922644..11922651,- | |id=chr16:11922644..11922651,- | ||
|ontology_enrichment_celltype=CL:0002541!6.94e-44!3;CL:0000039!1.09e-18!7;CL:0000586!1.09e-18!7;CL:0002537!2.82e-12!5 | |ontology_enrichment_celltype=CL:0002541!6.94e-44!3;CL:0000039!1.09e-18!7;CL:0000586!1.09e-18!7;CL:0002537!2.82e-12!5 | ||
|ontology_enrichment_celltype_v019=CL:0002541;9.40e-99;3!CL:0000349;1.99e-16;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.11e-98,3;CL:0000349,2.05e-16,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;3.61e-34;1 | |||
|ontology_enrichment_disease=DOID:1799!1.78e-15!1;DOID:10165!1.78e-15!1;DOID:1798!1.78e-15!1 | |ontology_enrichment_disease=DOID:1799!1.78e-15!1;DOID:10165!1.78e-15!1;DOID:1798!1.78e-15!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!6.94e-44!3;UBERON:0000920!6.94e-44!3;UBERON:0005631!1.57e-36!14;UBERON:0000158!1.57e-36!14;UBERON:0003124!2.60e-33!7;UBERON:0000478!2.91e-21!24;UBERON:0004923!8.53e-12!57;UBERON:0000305!4.95e-09!7;UBERON:0004871!5.18e-08!8 | |ontology_enrichment_uberon=UBERON:0000476!6.94e-44!3;UBERON:0000920!6.94e-44!3;UBERON:0005631!1.57e-36!14;UBERON:0000158!1.57e-36!14;UBERON:0003124!2.60e-33!7;UBERON:0000478!2.91e-21!24;UBERON:0004923!8.53e-12!57;UBERON:0000305!4.95e-09!7;UBERON:0004871!5.18e-08!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;9.40e-99;3!UBERON:0000920;9.40e-99;3!UBERON:0005631;2.16e-30;10!UBERON:0000158;2.16e-30;10!UBERON:0000478;1.42e-22;24!UBERON:0001987;1.32e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.11e-98,3;UBERON:0003124,2.63e-75,7;UBERON:0005631,4.09e-38,14;UBERON:0000158,4.09e-38,14;UBERON:0000478,1.46e-22,24;UBERON:0001987,1.32e-09,4;UBERON:0004340,1.32e-09,4;UBERON:0004923,1.38e-08,66 | |||
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|short_description=p3@BCAR4 | |short_description=p3@BCAR4 | ||
}} | }} |
Latest revision as of 07:19, 20 September 2015
Short description: | p3@BCAR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BCAR4_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 37bp_to_ENST00000505806, NR_024049, NR_024050, uc002dbo.2, uc010uyv.1_5end |
EntrezGene: | BCAR4 |
HGNC: | 22170 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.11e-98 | 3 |
extraembryonic cell | 2.05e-16 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.11e-98 | 3 |
chorion | 2.63e-75 | 7 |
extraembryonic membrane | 4.09e-38 | 14 |
membranous layer | 4.09e-38 | 14 |
extraembryonic structure | 1.46e-22 | 24 |
placenta | 1.32e-09 | 4 |
allantois | 1.32e-09 | 4 |
organ component layer | 1.38e-08 | 66 |