FFCP PHASE1:Hg19::chr16:11922665..11922694,-: Difference between revisions
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|id=chr16:11922665..11922694,-
|short_description=p1@BCAR4
|description=CAGE_peak_1_at_BCAR4_5end
|association_with_transcript=0bp_to_ENST00000505806,NR_024049,NR_0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=400500 | |EntrezGene=400500 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=22170 | |HGNC=22170 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000505806,NR_024049,NR_024050,uc002dbo.2,uc010uyv.1_5end | |||
|cluster_id=chr16:11922665..11922694,- | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_1_at_BCAR4_5end | |||
|id=chr16:11922665..11922694,- | |||
|ontology_enrichment_celltype=CL:0002541!1.23e-25!3;CL:0000039!4.04e-11!7;CL:0000586!4.04e-11!7;CL:0000083!5.74e-09!4;CL:0002537!2.21e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002541;5.80e-41;3!CL:0000349;8.41e-25;19!CL:0000039;1.17e-17;7!CL:0000586;1.17e-17;7!CL:0002537;2.06e-11;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,5.80e-41,3;CL:0000349,8.23e-25,19;CL:0000039,1.17e-17,7;CL:0000586,1.17e-17,7;CL:0002537,2.06e-11,5 | |||
|ontology_enrichment_development_v019=UBERON:0003124;4.73e-15;1 | |||
|ontology_enrichment_disease=DOID:1799!1.56e-09!1;DOID:10165!1.56e-09!1;DOID:1798!1.56e-09!1;DOID:178!2.16e-09!1;DOID:326!2.16e-09!1;DOID:3978!2.16e-09!1;DOID:3394!2.16e-09!1;DOID:5844!2.16e-09!1;DOID:1793!5.74e-09!4 | |||
|ontology_enrichment_disease_v019=DOID:1799;1.41e-14;1!DOID:10165;1.41e-14;1!DOID:1798;1.41e-14;1!DOID:178;2.25e-14;1!DOID:326;2.25e-14;1!DOID:3978;2.25e-14;1!DOID:3394;2.25e-14;1!DOID:5844;2.25e-14;1!DOID:114;7.78e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.41e-14,1;DOID:10165,1.41e-14,1;DOID:1798,1.41e-14,1;DOID:178,2.41e-14,1;DOID:326,2.41e-14,1;DOID:3978,2.41e-14,1;DOID:3394,2.41e-14,1;DOID:5844,2.41e-14,1;DOID:114,8.04e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0003124!1.61e-29!7;UBERON:0005631!5.19e-28!14;UBERON:0000158!5.19e-28!14;UBERON:0000476!1.23e-25!3;UBERON:0000920!1.23e-25!3;UBERON:0000478!4.93e-16!24;UBERON:0001987!3.26e-09!4;UBERON:0004340!3.26e-09!4;UBERON:0004923!3.99e-08!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;5.80e-41;3!UBERON:0000920;5.80e-41;3!UBERON:0005631;3.59e-33;10!UBERON:0000158;3.59e-33;10!UBERON:0000478;1.32e-26;24!UBERON:0001987;2.50e-14;4!UBERON:0000305;2.07e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,9.31e-48,7;UBERON:0005631,7.11e-46,14;UBERON:0000158,7.11e-46,14;UBERON:0000920,5.80e-41,3;UBERON:0000478,1.29e-26,24;UBERON:0001987,2.41e-14,4;UBERON:0004340,2.41e-14,4;UBERON:0004923,4.10e-12,66;UBERON:0000305,2.07e-08,7;UBERON:0004871,1.82e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58275720940538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.99306318531491,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.7130102630664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.5277947013903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1759687216222,3.26661148915902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,33.6623300406568,18.4900747484131,6.7361370591645,82.9403015302991,19.5102873945967,103.941781323634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.19325901047881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6667748909597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,123.03018741558,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58275720940538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.99306318531491,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.7130102630664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.5277947013903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1759687216222,3.26661148915902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,33.6623300406568,18.4900747484131,6.7361370591645,82.9403015302991,19.5102873945967,103.941781323634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.19325901047881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6667748909597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,123.03018741558,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@BCAR4 | |||
}} | }} |
Latest revision as of 07:21, 20 September 2015
Short description: | p1@BCAR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BCAR4_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000505806, NR_024049, NR_024050, uc002dbo.2, uc010uyv.1_5end |
EntrezGene: | BCAR4 |
HGNC: | 22170 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 5.80e-41 | 3 |
extraembryonic cell | 8.23e-25 | 19 |
germ line cell | 1.17e-17 | 7 |
germ cell | 1.17e-17 | 7 |
amnion mesenchymal stem cell | 2.06e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
chorion | 9.31e-48 | 7 |
extraembryonic membrane | 7.11e-46 | 14 |
membranous layer | 7.11e-46 | 14 |
egg chorion | 5.80e-41 | 3 |
extraembryonic structure | 1.29e-26 | 24 |
placenta | 2.41e-14 | 4 |
allantois | 2.41e-14 | 4 |
organ component layer | 4.10e-12 | 66 |
amnion | 2.07e-08 | 7 |
somatic layer of lateral plate mesoderm | 1.82e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.41e-14 | 1 |
endocrine pancreas cancer | 1.41e-14 | 1 |
pancreatic endocrine carcinoma | 1.41e-14 | 1 |
vascular disease | 2.41e-14 | 1 |
ischemia | 2.41e-14 | 1 |
extrinsic cardiomyopathy | 2.41e-14 | 1 |
myocardial ischemia | 2.41e-14 | 1 |
myocardial infarction | 2.41e-14 | 1 |
heart disease | 8.04e-08 | 2 |