FFCP PHASE1:Hg19::chr1:207277590..207277620,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=722 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1325 | |||
|TSSclassifier=strong | |||
|UniProt=P04003,Q5VVQ8 | |||
|association_with_transcript=0bp_to_ENST00000367070,NM_000715,uc001hfo.2_5end | |||
|cluster_id=chr1:207277590..207277620,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_5_at_C4BPA_5end | |||
|id=chr1:207277590..207277620,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.05e-15!12;CL:0000417!1.05e-15!12;CL:0000668!1.05e-15!12;CL:0000414!1.05e-15!12;CL:0000412!1.05e-15!12;CL:0000182!1.05e-15!12;CL:0002150!1.84e-11!3;CL:0000861!1.84e-11!3;CL:0000223!4.49e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.12e-34;12!CL:0000771;3.70e-07;2!CL:0000094;8.60e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.12e-34,12;CL:0000771,3.70e-07,2;CL:0000223,6.45e-07,58;CL:0000094,8.60e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.44e-26;11!UBERON:0009497;3.58e-22;13!UBERON:0001041;2.25e-18;30!UBERON:0003104;2.80e-09;31 | |||
|ontology_enrichment_disease=DOID:305!3.36e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001041!1.11e-18!98;UBERON:0004921!1.26e-16!129;UBERON:0004185!1.26e-16!129;UBERON:0000077!1.32e-16!130;UBERON:0005057!2.32e-16!26;UBERON:0002107!7.92e-16!19;UBERON:0006925!7.92e-16!19;UBERON:0008836!7.92e-16!19;UBERON:0001007!7.14e-14!155;UBERON:0001555!7.14e-14!155;UBERON:0007026!7.14e-14!155;UBERON:0008835!1.98e-13!22;UBERON:0003894!1.98e-13!22;UBERON:0004119!2.90e-13!169;UBERON:0000925!2.90e-13!169;UBERON:0006595!2.90e-13!169;UBERON:0009854!9.05e-13!23;UBERON:0000949!6.39e-12!45;UBERON:0007499!1.31e-11!25;UBERON:0009497!1.31e-11!25;UBERON:0000015!1.31e-11!25;UBERON:0002423!1.31e-11!25;UBERON:0006235!1.31e-11!25;UBERON:0004161!1.31e-11!25;UBERON:0002368!1.80e-11!35;UBERON:0005911!2.88e-11!82;UBERON:0002365!3.64e-11!31;UBERON:0002330!3.64e-11!31;UBERON:0003929!3.92e-11!54;UBERON:0009856!4.28e-11!26;UBERON:0001737!3.86e-10!9;UBERON:0001048!2.83e-09!168;UBERON:0002530!1.88e-08!59;UBERON:0008947!3.34e-08!38;UBERON:0003258!3.34e-08!38;UBERON:0005177!9.55e-08!107;UBERON:0000926!6.55e-07!448;UBERON:0004120!6.55e-07!448;UBERON:0006603!6.55e-07!448;UBERON:0000466!7.96e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.47e-38;19!UBERON:0006925;1.47e-38;19!UBERON:0002423;3.85e-29;25!UBERON:0002365;1.66e-22;31!UBERON:0002330;1.66e-22;31!UBERON:0002368;7.75e-20;33!UBERON:0000949;1.49e-14;43!UBERON:0002171;4.23e-13;1!UBERON:0006518;4.23e-13;1!UBERON:0008949;4.23e-13;1!UBERON:0000101;4.23e-13;1!UBERON:0002167;4.23e-13;1!UBERON:0005172;8.90e-09;52!UBERON:0005173;8.90e-09;52!UBERON:0002417;1.01e-07;58!UBERON:0000916;1.01e-07;58!UBERON:0002530;1.26e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.47e-38,19;UBERON:0006925,1.47e-38,19;UBERON:0008836,1.47e-38,19;UBERON:0008835,3.29e-33,22;UBERON:0003894,3.29e-33,22;UBERON:0009854,9.79e-32,23;UBERON:0007499,3.85e-29,25;UBERON:0009497,3.85e-29,25;UBERON:0000015,3.85e-29,25;UBERON:0002423,3.85e-29,25;UBERON:0006235,3.85e-29,25;UBERON:0004161,3.85e-29,25;UBERON:0009856,5.41e-28,26;UBERON:0002365,2.32e-23,31;UBERON:0002330,2.32e-23,31;UBERON:0002368,1.32e-20,35;UBERON:0000949,7.51e-16,45;UBERON:0002171,4.23e-13,1;UBERON:0006518,4.23e-13,1;UBERON:0008949,4.23e-13,1;UBERON:0000101,4.23e-13,1;UBERON:0002167,4.23e-13,1;UBERON:0003929,4.51e-13,54;UBERON:0005172,4.51e-13,54;UBERON:0005173,4.51e-13,54;UBERON:0005911,4.66e-13,82;UBERON:0001041,3.11e-12,87;UBERON:0002530,6.82e-12,59;UBERON:0002417,1.11e-11,60;UBERON:0000916,1.11e-11,60;UBERON:0005177,2.33e-10,101;UBERON:0009569,3.25e-09,112;UBERON:0004921,1.35e-08,118;UBERON:0001007,9.29e-07,145;UBERON:0001555,9.29e-07,145;UBERON:0007026,9.29e-07,145 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0.512321413058201,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35762335895883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.22462922052443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0.482022059766964,0,0,0,0.134831308160164,0.392442930250692,0,0,0,0,0,181.259699795218,235.87853200263,165.421173870793,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.6486981046216,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.7856411582368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.7160823029439,0,0,0,0,0,0,0,3.09701308095126,2.87953591160336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.848118428603645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.219267951258557,0.164230914106418,0,0,0,0,0,0,0,0,0,0,0.288180834308212,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18174773460835,1.97798060114799,1.48287796479207,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,189.198933678404,7.95041333473328,0,0,0.342173675768659,0,26.3764909042206,0.471612915298998,13.6698888264575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0.781514011233092,0,0.163771917510097,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386747327841463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.502055437748735,0,0,0,0,0.179650404213174,0,0.244482888365733,0.406896178315738,0,0,0 | |||
|short_description=p5@C4BPA | |||
}} |
Latest revision as of 07:24, 20 September 2015
Short description: | p5@C4BPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_C4BPA_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000367070, NM_000715, uc001hfo.2_5end |
EntrezGene: | C4BPA |
HGNC: | 1325 |
UniProt: | P04003Q5VVQ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.12e-34 | 12 |
eosinophil | 3.70e-07 | 2 |
endodermal cell | 6.45e-07 | 58 |
granulocyte | 8.60e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
liver | 1.47e-38 | 19 |
digestive gland | 1.47e-38 | 19 |
liver bud | 1.47e-38 | 19 |
hepatic diverticulum | 3.29e-33 | 22 |
liver primordium | 3.29e-33 | 22 |
digestive tract diverticulum | 9.79e-32 | 23 |
epithelial sac | 3.85e-29 | 25 |
epithelium of foregut-midgut junction | 3.85e-29 | 25 |
anatomical boundary | 3.85e-29 | 25 |
hepatobiliary system | 3.85e-29 | 25 |
foregut-midgut junction | 3.85e-29 | 25 |
septum transversum | 3.85e-29 | 25 |
sac | 5.41e-28 | 26 |
exocrine gland | 2.32e-23 | 31 |
exocrine system | 2.32e-23 | 31 |
endocrine gland | 1.32e-20 | 35 |
endocrine system | 7.51e-16 | 45 |
lower lobe of right lung | 4.23e-13 | 1 |
right lung lobe | 4.23e-13 | 1 |
lower lobe of lung | 4.23e-13 | 1 |
lobe of lung | 4.23e-13 | 1 |
right lung | 4.23e-13 | 1 |
gut epithelium | 4.51e-13 | 54 |
abdomen element | 4.51e-13 | 54 |
abdominal segment element | 4.51e-13 | 54 |
endo-epithelium | 4.66e-13 | 82 |
foregut | 3.11e-12 | 87 |
gland | 6.82e-12 | 59 |
abdominal segment of trunk | 1.11e-11 | 60 |
abdomen | 1.11e-11 | 60 |
trunk region element | 2.33e-10 | 101 |
subdivision of trunk | 3.25e-09 | 112 |
subdivision of digestive tract | 1.35e-08 | 118 |
digestive system | 9.29e-07 | 145 |
digestive tract | 9.29e-07 | 145 |
primitive gut | 9.29e-07 | 145 |