FFCP PHASE1:Hg19::chr18:71815987..71816008,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr18:71815987..71816008,+
|short_description=p5@TIMM21
|description=CAGE_peak_5_at_TIMM21_5end
|association_with_transcript=241bp_to_ENST00000169551,NM_014177,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29090 | |EntrezGene=29090 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25010 | |HGNC=25010 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BVV7,A8K1K8 | |UniProt=Q9BVV7,A8K1K8 | ||
|association_with_transcript=241bp_to_ENST00000169551,NM_014177,uc010dqr.1_5end | |||
|cluster_id=chr18:71815987..71816008,+ | |||
|coexpression_cluster_id=C74 | |||
|description=CAGE_peak_5_at_TIMM21_5end | |||
|id=chr18:71815987..71816008,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;2.93e-12;1!CL:0002625;2.93e-12;1!CL:0000216;2.93e-12;1!CL:0000342;8.62e-12;1!CL:0002565;8.62e-12;1!CL:0000945;8.69e-11;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,2.93e-12,1;CL:0002625,2.93e-12,1;CL:0000216,2.93e-12,1;CL:0000342,1.19e-11,1;CL:0002565,1.19e-11,1;CL:0000945,8.18e-11,24;CL:0000826,8.18e-11,24;CL:0000838,7.17e-07,52;CL:0000542,9.85e-07,53;CL:0000051,9.85e-07,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.97e-08!235;DOID:14566!6.64e-08!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.88e-08!9;UBERON:0001869!9.92e-08!32;UBERON:0001893!1.54e-07!34;UBERON:0002791!2.60e-07!33;UBERON:0002020!3.73e-07!34;UBERON:0003528!3.73e-07!34;UBERON:0001950!8.40e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.93e-12;1!UBERON:0001343;2.93e-12;1!UBERON:0004910;2.93e-12;1!UBERON:0004813;2.93e-12;1!UBERON:0002506;8.62e-12;1!UBERON:0001769;8.62e-12;1!UBERON:0002331;4.31e-10;10!UBERON:0004909;9.43e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,2.93e-12,1;UBERON:0001343,2.93e-12,1;UBERON:0004910,2.93e-12,1;UBERON:0005154,2.93e-12,1;UBERON:0005295,2.93e-12,1;UBERON:0004813,2.93e-12,1;UBERON:0005297,2.93e-12,1;UBERON:0005294,2.93e-12,1;UBERON:0010141,2.93e-12,1;UBERON:0005891,2.93e-12,1;UBERON:0002506,1.19e-11,1;UBERON:0001769,1.19e-11,1;UBERON:0002331,4.52e-10,10;UBERON:0000358,4.52e-10,10;UBERON:0000307,4.52e-10,10;UBERON:0000091,4.52e-10,10;UBERON:0000087,4.52e-10,10;UBERON:0007010,4.52e-10,10;UBERON:0007806,4.52e-10,10;UBERON:0008780,4.52e-10,10;UBERON:0005728,4.52e-10,10;UBERON:0004909,9.44e-07,2 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0.273748850145768,0.125542639594803,1.37544130346312,1.06730766284929,1.41679406364623,0,0,0,0,0,0,0.154934401160603,1.84820002233648,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0.280901613404497,0,0.245668634623536,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.453728732640084,0,0,0.211931901159562,0,0.206105058476878,0,0,0,0,0,0,0,0.355009592516614,0,0,0.193260853163297,0,0.286804595389004,0.243947412259191,0.397589304964456,0.348581828608555,0.310983165046111,0.756962552626885,0.72995471815166,0,0,0,0,0,0.354920400119532,0.505754070234305,0.241011029883482,0.441175890929576,0.653638332277218,0.949082476444386,0.404493924480493,0.196221465125346,1.15424147083917,0,0,0,0,0,0,0,0.882926198829301,0,1.20097467208968,0,0,0.100528972411631,0,0,0,0,0.34779121492523,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0.283550194484773,0,0,0.383382679165211,0.492663237895943,0,0,0,0.12624243342638,0,0,0,0,0.205654985406647,0.600686115687835,0,0,0,0.1466765716419,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0.301439377059586,0,0,0,0,0,0,1.14861935834114,0,0.289562613335158,0,0,0.112085143993527,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0.154209693802656,0.177561725313127,0.246381468041427,0,0.116210378459959,0,1.20303882181971,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0.219259876645935,0.261435451024901,0.256450125116389,0,0,0.103041011647722,0.183138929636687,0.495056999523528,0.574265537996172,0,3.21367859688319,0,0,0,0,0,0,0.0852266274161009,0,0.165284915360978,0.192190067365106,0.127612712494584,0.10115778085555,0.464845549297286,2.20368642781448,0,0,0,1.73986598415015,0.37064843820784,0.286249773483982,0,0,0,0,0,0.636406495851874,0,0,0.274537029736055,0.235624804691373,0.202182481573316,0,0,0,0,0,0,0,0,0.551365343546124,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0.196498082026242,0,0,0,0,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0.557409525377156,0.144269212976445,0,0,0.199579371432817,0,0.211673582723883,0,0,0.228234679033192,0.313359791546046,0,0,0.1605880751037,0,0,0,0,0,0.166849141711909,0.390776190804081,0.556812347790485,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0.329607748453519,0.211125408127993,0,0,0.503865495708552,0.102268682502155,1.35393286007176,0,0.0898683511473268,0,0,0,0,0,0,0.185536196323703,0,0,0.0874599999961957,0,0,0,0,0.344743373241465,0.291604613383254,0,0.885741385813839,0.241192877250816,0,0.221158519862449,0,0.438770794307945,0,0,0,0,0.23056390438806,0.0897576444097721,0.108647371922008,0,0.0915975934018623,0,0,0.31396051279005,0,0.225595660617181,0,0,0.189753732724185,0.317873157960757,0,0,0,0,0,0.0884575645033392,0,2.37216902944498,0.988511511572023,1.46190729307638,0.067401132980677,0.802577647298789,0.468528891450678,0.364909578431332,0,0.485560759068186,0,0,0,0,0.150323419414493,0,0,0,0,0,0.284609546029793,0.138674673013139,0,0,0,0,0.171986032471617,0.387025325156341,0.146178634172371,0.328461828212837,0,0,0.225980740780532,0,0,0.126621591911757,0,0,0,0.19980960958213,0.144090417154106,0.458146384663663,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0.429765441419957,1.8402114799552,0,0,0,0,0,0,0,0.360299883542404,0,0.236349546921671,0.494495150286999,0.26961417541674,0,0.338693328263138,0,0,0,1.65047323916681,0,0,0,0.485996453264197,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0.157054096250234,0.886068179966986,0.366078794705889,0.250381861413,0,0,0.124192805882767,0.138348634936231,0.249960815924213,0,0,0,0,0,0.298509605773748,0,0,0,0,0,0,0,0,0,0.477890301491107,0.449803112163605,0.310525913752519,1.24411862352257,0.797525143673985,0.521745061811734,0.150257608997218,1.14241563650639,0,0,0.322231671127465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0.192914038270915,0,0.256241518587947,0,0,0,0,0,0,0,0.737318726261158,0,0.999936979274649,0,0,0,0,0,0,0,0.215649622793364,0,0,0,0,0,0,0,0,0.80057074828547,0,0.6124909547064,0.321146125482298,0,0.159633859057151,0.205116364240755,0.252071696221718,0.138314504928436,0.161475645631851,0,0.0981477185010256,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0.0675375846183947,0.781078098613847,0.206686796501184,0.253663240775627,0,0,0,0.175871244359621,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| ||
|short_description=p5@TIMM21 | |||
}} | }} |
Latest revision as of 13:49, 24 September 2015
Short description: | p5@TIMM21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TIMM21_5end |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | 241bp_to_ENST00000169551, NM_014177, uc010dqr.1_5end |
EntrezGene: | TIMM21 |
HGNC: | 25010 |
UniProt: | Q9BVV7A8K1K8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 2.93e-12 | 1 |
seminiferous tubule epithelial cell | 2.93e-12 | 1 |
Sertoli cell | 2.93e-12 | 1 |
pigment cell (sensu Vertebrata) | 1.19e-11 | 1 |
iris pigment epithelial cell | 1.19e-11 | 1 |
lymphocyte of B lineage | 8.18e-11 | 24 |
pro-B cell | 8.18e-11 | 24 |
lymphoid lineage restricted progenitor cell | 7.17e-07 | 52 |
lymphocyte | 9.85e-07 | 53 |
common lymphoid progenitor | 9.85e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 2.93e-12 | 1 |
seminiferous tubule of testis | 2.93e-12 | 1 |
epithelium of male gonad | 2.93e-12 | 1 |
epithelial cord | 2.93e-12 | 1 |
sex cord | 2.93e-12 | 1 |
seminiferous tubule epithelium | 2.93e-12 | 1 |
testis sex cord | 2.93e-12 | 1 |
genital ridge | 2.93e-12 | 1 |
primitive sex cord of indifferent gonad | 2.93e-12 | 1 |
coelomic epithelium | 2.93e-12 | 1 |
iris epithelium | 1.19e-11 | 1 |
iris | 1.19e-11 | 1 |
umbilical cord | 4.52e-10 | 10 |
blastocyst | 4.52e-10 | 10 |
blastula | 4.52e-10 | 10 |
bilaminar disc | 4.52e-10 | 10 |
inner cell mass | 4.52e-10 | 10 |
cleaving embryo | 4.52e-10 | 10 |
connecting stalk | 4.52e-10 | 10 |
inner cell mass derived epiblast | 4.52e-10 | 10 |
extraembryonic mesoderm | 4.52e-10 | 10 |
epithelium of gonad | 9.44e-07 | 2 |