FFCP PHASE1:Hg19::chr4:109088772..109088783,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51176 | |EntrezGene=51176 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6551 | |HGNC=6551 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-22bp_to_ENST00000504775_5end | |association_with_transcript=-22bp_to_ENST00000504775_5end | ||
|cluster_id=chr4:109088772..109088783,- | |||
|coexpression_cluster_id=C921 | |||
|description=CAGE_peak_40_at_LEF1_5end | |description=CAGE_peak_40_at_LEF1_5end | ||
|id=chr4:109088772..109088783,- | |id=chr4:109088772..109088783,- | ||
|ontology_enrichment_celltype=CL:0000842!3.31e-07!3;CL:0000084!9.43e-07!25;CL:0000827!9.43e-07!25 | |ontology_enrichment_celltype=CL:0000842!3.31e-07!3;CL:0000084!9.43e-07!25;CL:0000827!9.43e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.31e-09;25!CL:0000226;1.60e-09;3!CL:0000842;1.60e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.39e-09,25;CL:0000827,1.39e-09,25;CL:0000226,1.54e-09,3;CL:0000842,1.54e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;8.28e-14;2!UBERON:0005058;8.28e-14;2!UBERON:0009113;8.28e-14;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.40e-07,4;UBERON:0005058,1.40e-07,4;UBERON:0009113,1.40e-07,4;UBERON:0003295,1.40e-07,4;UBERON:0005562,1.40e-07,4 | |||
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| ||
|short_description=p40@LEF1 | |short_description=p40@LEF1 | ||
}} | }} |
Latest revision as of 14:58, 24 September 2015
Short description: | p40@LEF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_40_at_LEF1_5end |
Coexpression cluster: | C921_chronic_thymus_CD4_acute_CD8_Hodgkin_Peripheral |
Association with transcript: | -22bp_to_ENST00000504775_5end |
EntrezGene: | LEF1 |
HGNC: | 6551 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.39e-09 | 25 |
pro-T cell | 1.39e-09 | 25 |
single nucleate cell | 1.54e-09 | 3 |
mononuclear cell | 1.54e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.40e-07 | 4 |
hemolymphoid system gland | 1.40e-07 | 4 |
thymic region | 1.40e-07 | 4 |
pharyngeal gland | 1.40e-07 | 4 |
thymus primordium | 1.40e-07 | 4 |