FFCP PHASE1:Hg19::chr7:100551088..100551101,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:100551088..100551101,+
|short_description=p16@MUC3A,p16@MUC3B
|description=CAGE_peak_16_at_MUC3A_5end,CAGE_peak_16_at_MUC3B_5end
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4584,57876 | |EntrezGene=4584,57876 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13384,7513 | |HGNC=13384,7513 | ||
|TSSclassifier=strong | |||
|UniProt=Q02505,Q9H195 | |UniProt=Q02505,Q9H195 | ||
|association_with_transcript=-148bp_to_ENST00000319509_5end | |||
|cluster_id=chr7:100551088..100551101,+ | |||
|coexpression_cluster_id=C124 | |||
|description=CAGE_peak_16_at_MUC3A_5end,CAGE_peak_16_at_MUC3B_5end | |||
|id=chr7:100551088..100551101,+ | |||
|ontology_enrichment_celltype=CL:0000039!1.17e-18!7;CL:0000586!1.17e-18!7 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.04e-16;1 | |||
|ontology_enrichment_disease=DOID:3095!4.13e-08!22;DOID:2994!4.13e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:3493;6.93e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,5.94e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0002370!7.30e-13!4;UBERON:0005058!7.30e-13!4;UBERON:0009113!7.30e-13!4;UBERON:0003295!7.30e-13!4;UBERON:0005562!7.30e-13!4;UBERON:0003929!3.82e-10!54;UBERON:0000160!3.90e-09!27;UBERON:0003351!9.81e-09!6;UBERON:0009722!3.91e-08!11;UBERON:0007690!3.91e-08!11;UBERON:0001007!1.39e-07!155;UBERON:0001555!1.39e-07!155;UBERON:0007026!1.39e-07!155;UBERON:0004177!1.51e-07!7;UBERON:0004921!1.91e-07!129;UBERON:0004185!1.91e-07!129;UBERON:0005057!4.78e-07!26;UBERON:0002146!4.97e-07!1;UBERON:0005623!4.97e-07!1;UBERON:0005418!6.60e-07!1;UBERON:0001389!6.60e-07!1;UBERON:0000026!6.60e-07!1;UBERON:0008784!6.60e-07!1;UBERON:0006058!6.60e-07!1;UBERON:0003663!6.60e-07!1;UBERON:0001383!6.60e-07!1;UBERON:0004256!6.60e-07!1;UBERON:0002529!6.60e-07!1;UBERON:0004708!6.60e-07!1;UBERON:0002101!6.60e-07!1;UBERON:0004709!6.60e-07!1;UBERON:0003661!6.60e-07!1;UBERON:0002471!6.60e-07!1;UBERON:0004357!6.60e-07!1;UBERON:0009872!6.60e-07!1;UBERON:0004347!6.60e-07!1;UBERON:0005420!6.60e-07!1;UBERON:0005732!6.60e-07!1;UBERON:0006057!6.60e-07!1;UBERON:0000978!6.60e-07!1;UBERON:0002103!6.60e-07!1;UBERON:0001665!6.60e-07!1;UBERON:0003823!6.60e-07!1;UBERON:0000154!6.60e-07!1;UBERON:0005733!6.60e-07!1;UBERON:0005730!6.60e-07!1;UBERON:0005409!6.78e-07!35;UBERON:0002368!8.28e-07!35;UBERON:0000029!8.75e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;2.62e-30;17!UBERON:0002108;1.59e-28;4!UBERON:0005409;1.05e-23;22!UBERON:0002146;1.93e-16;1!UBERON:0005623;1.93e-16;1!UBERON:0004921;1.55e-13;33!UBERON:0000059;5.49e-13;11!UBERON:0002370;6.93e-09;2!UBERON:0005058;6.93e-09;2!UBERON:0009113;6.93e-09;2!UBERON:0001155;1.16e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.76e-30,17;UBERON:0002108,1.59e-28,4;UBERON:0005409,6.10e-21,25;UBERON:0002146,1.93e-16,1;UBERON:0005623,1.93e-16,1;UBERON:0000059,5.72e-13,11;UBERON:0001155,1.09e-07,9;UBERON:0001007,1.11e-07,145;UBERON:0001555,1.11e-07,145;UBERON:0007026,1.11e-07,145;UBERON:0004921,1.39e-07,118;UBERON:0004119,7.02e-07,160;UBERON:0000925,7.02e-07,160;UBERON:0006595,7.02e-07,160 | |||
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|short_description=p16@MUC3A,p16@MUC3B | |||
}} | }} |
Latest revision as of 15:09, 24 September 2015
Short description: | p16@MUC3A, p16@MUC3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_MUC3A_5end, CAGE_peak_16_at_MUC3B_5end |
Coexpression cluster: | C124_small_temporal_duodenum_colon_gall_signet_Hepatocyte |
Association with transcript: | -148bp_to_ENST00000319509_5end |
EntrezGene: | 4584,57876 |
HGNC: | 7513&submit=Submit 13384, 7513 |
UniProt: | Q02505Q9H195 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 2.76e-30 | 17 |
small intestine | 1.59e-28 | 4 |
gastrointestinal system | 6.10e-21 | 25 |
pulmonary valve | 1.93e-16 | 1 |
semi-lunar valve | 1.93e-16 | 1 |
large intestine | 5.72e-13 | 11 |
colon | 1.09e-07 | 9 |
digestive system | 1.11e-07 | 145 |
digestive tract | 1.11e-07 | 145 |
primitive gut | 1.11e-07 | 145 |
subdivision of digestive tract | 1.39e-07 | 118 |
endoderm-derived structure | 7.02e-07 | 160 |
endoderm | 7.02e-07 | 160 |
presumptive endoderm | 7.02e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 5.94e-09 | 2 |