FFCP PHASE2:Hg19::chr6:128562461..128562487,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:5796 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:9674 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=5796 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=9674 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
Latest revision as of 15:36, 24 September 2015
| Short description: | p5@PTPRK |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_5_at_PTPRK_5end |
| Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
| Association with transcript: | -17bp_to_ENST00000368205_5end |
| EntrezGene: | PTPRK |
| HGNC: | 9674 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p5@PTPRK |
|---|
0
5
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| lymphocyte of B lineage | 5.26e-75 | 24 |
| pro-B cell | 5.26e-75 | 24 |
| B cell | 8.19e-74 | 14 |
| lymphoid lineage restricted progenitor cell | 5.34e-33 | 52 |
| lymphocyte | 2.56e-32 | 53 |
| common lymphoid progenitor | 2.56e-32 | 53 |
| nongranular leukocyte | 4.39e-13 | 115 |
| hematopoietic lineage restricted progenitor cell | 2.05e-12 | 120 |
| leukocyte | 1.33e-10 | 136 |
| hematopoietic oligopotent progenitor cell | 1.72e-08 | 161 |
Showing 1 to 10 of 13 entries
| Ontology term | p-value | n |
|---|---|---|
| blood | 2.44e-11 | 15 |
| haemolymphatic fluid | 2.44e-11 | 15 |
| organism substance | 2.44e-11 | 15 |
| spleen | 1.79e-10 | 3 |
| gastrointestinal system mesentery | 1.79e-10 | 3 |
| stomach region | 1.79e-10 | 3 |
| mesentery | 1.79e-10 | 3 |
| gastrointestinal system serosa | 1.79e-10 | 3 |
| mesentery of stomach | 1.79e-10 | 3 |
| gut mesentery | 1.79e-10 | 3 |
Showing 1 to 10 of 22 entries
