FFCP PHASE1:Hg19::chr19:6393218..6393229,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2962 | |EntrezGene=2962 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4652 | |HGNC=4652 | ||
|TSSclassifier=strong | |||
|UniProt=F5H761 | |UniProt=F5H761 | ||
|association_with_transcript=-2bp_to_ENST00000542045_5end | |association_with_transcript=-2bp_to_ENST00000542045_5end | ||
|cluster_id=chr19:6393218..6393229,- | |||
|description=CAGE_peak_4_at_GTF2F1_5end | |description=CAGE_peak_4_at_GTF2F1_5end | ||
|id=chr19:6393218..6393229,- | |id=chr19:6393218..6393229,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.25e-08!57;UBERON:0005068!1.25e-08!57;UBERON:0006241!1.25e-08!57;UBERON:0007135!1.25e-08!57;UBERON:0000062!1.44e-08!511;UBERON:0002616!4.13e-07!59;UBERON:0000467!6.38e-07!625;UBERON:0000480!7.31e-07!626 | |ontology_enrichment_uberon=UBERON:0001049!1.25e-08!57;UBERON:0005068!1.25e-08!57;UBERON:0006241!1.25e-08!57;UBERON:0007135!1.25e-08!57;UBERON:0000062!1.44e-08!511;UBERON:0002616!4.13e-07!59;UBERON:0000467!6.38e-07!625;UBERON:0000480!7.31e-07!626 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.72e-09,56;UBERON:0005068,3.72e-09,56;UBERON:0006241,3.72e-09,56;UBERON:0007135,3.72e-09,56;UBERON:0000073,9.97e-09,53;UBERON:0002616,9.97e-09,53;UBERON:0000955,5.69e-07,68;UBERON:0006238,5.69e-07,68;UBERON:0010314,6.02e-07,132 | |||
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| ||
|short_description=p4@GTF2F1 | |short_description=p4@GTF2F1 | ||
}} | }} |
Latest revision as of 15:43, 24 September 2015
Short description: | p4@GTF2F1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GTF2F1_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_ENST00000542045_5end |
EntrezGene: | GTF2F1 |
HGNC: | 4652 |
UniProt: | F5H761 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 3.72e-09 | 56 |
neural rod | 3.72e-09 | 56 |
future spinal cord | 3.72e-09 | 56 |
neural keel | 3.72e-09 | 56 |
regional part of nervous system | 9.97e-09 | 53 |
regional part of brain | 9.97e-09 | 53 |
brain | 5.69e-07 | 68 |
future brain | 5.69e-07 | 68 |
structure with developmental contribution from neural crest | 6.02e-07 | 132 |