FFCP PHASE1:Hg19::chr12:7125770..7125835,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10162 | |EntrezGene=10162 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30244 | |HGNC=30244 | ||
|TSSclassifier=strong | |||
|UniProt=Q6P1A2,F5H0M4,F5GYT3,F5H680,F5H7K7,B7Z3N5 | |UniProt=Q6P1A2,F5H0M4,F5GYT3,F5H680,F5H7K7,B7Z3N5 | ||
|association_with_transcript=0bp_to_ENST00000261407,ENST00000535479,ENST00000536797,ENST00000536971,ENST00000538910,ENST00000540090,ENST00000543794,uc010sfw.1_5end | |association_with_transcript=0bp_to_ENST00000261407,ENST00000535479,ENST00000536797,ENST00000536971,ENST00000538910,ENST00000540090,ENST00000543794,uc010sfw.1_5end | ||
|cluster_id=chr12:7125770..7125835,- | |||
|description=CAGE_peak_1_at_LPCAT3_5end | |description=CAGE_peak_1_at_LPCAT3_5end | ||
|id=chr12:7125770..7125835,- | |id=chr12:7125770..7125835,- | ||
|ontology_enrichment_celltype=CL:0000066!2.10e-08!254;CL:0000223!6.28e-08!59 | |ontology_enrichment_celltype=CL:0000066!2.10e-08!254;CL:0000223!6.28e-08!59 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.58e-08,253;CL:0000223,1.22e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.94e-19!169;UBERON:0000925!1.94e-19!169;UBERON:0006595!1.94e-19!169;UBERON:0001007!6.55e-17!155;UBERON:0001555!6.55e-17!155;UBERON:0007026!6.55e-17!155;UBERON:0004921!1.32e-16!129;UBERON:0004185!1.32e-16!129;UBERON:0003104!2.67e-15!238;UBERON:0009142!2.67e-15!238;UBERON:0000077!2.39e-14!130;UBERON:0001041!2.00e-12!98;UBERON:0000481!6.18e-12!347;UBERON:0005177!3.05e-09!107;UBERON:0001048!5.82e-09!168;UBERON:0001004!1.66e-08!72;UBERON:0000466!1.74e-08!126;UBERON:0002100!5.13e-08!216;UBERON:0005256!3.76e-07!143;UBERON:0002365!6.98e-07!31;UBERON:0002330!6.98e-07!31 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;5.48e-07;33!UBERON:0002365;7.68e-07;31!UBERON:0002330;7.68e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.54e-18,160;UBERON:0000925,3.54e-18,160;UBERON:0006595,3.54e-18,160;UBERON:0004921,1.13e-15,118;UBERON:0001007,1.35e-15,145;UBERON:0001555,1.35e-15,145;UBERON:0007026,1.35e-15,145;UBERON:0001041,1.40e-11,87;UBERON:0005177,3.59e-09,101;UBERON:0001004,2.66e-08,74;UBERON:0001048,2.86e-08,160;UBERON:0002100,5.85e-08,199;UBERON:0003104,1.29e-07,160;UBERON:0009142,1.29e-07,160;UBERON:0002365,6.98e-07,31;UBERON:0002330,6.98e-07,31 | |||
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| ||
|short_description=p1@LPCAT3 | |short_description=p1@LPCAT3 | ||
}} | }} |
Latest revision as of 16:20, 24 September 2015
Short description: | p1@LPCAT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LPCAT3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000261407, ENST00000535479, ENST00000536797, ENST00000536971, ENST00000538910, ENST00000540090, ENST00000543794, uc010sfw.1_5end |
EntrezGene: | LPCAT3 |
HGNC: | 30244 |
UniProt: | Q6P1A2F5H0M4F5GYT3F5H680F5H7K7B7Z3N5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.58e-08 | 253 |
endodermal cell | 1.22e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.54e-18 | 160 |
endoderm | 3.54e-18 | 160 |
presumptive endoderm | 3.54e-18 | 160 |
subdivision of digestive tract | 1.13e-15 | 118 |
digestive system | 1.35e-15 | 145 |
digestive tract | 1.35e-15 | 145 |
primitive gut | 1.35e-15 | 145 |
foregut | 1.40e-11 | 87 |
trunk region element | 3.59e-09 | 101 |
respiratory system | 2.66e-08 | 74 |
primordium | 2.86e-08 | 160 |
trunk | 5.85e-08 | 199 |
mesenchyme | 1.29e-07 | 160 |
entire embryonic mesenchyme | 1.29e-07 | 160 |
exocrine gland | 6.98e-07 | 31 |
exocrine system | 6.98e-07 | 31 |