FFCP PHASE1:Hg19::chr4:110723252..110723291,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3426 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5394 | |||
|TSSclassifier=strong | |||
|UniProt=P05156,A8K3L0 | |||
|association_with_transcript=43bp_to_ENST00000394634,NM_000204,uc003hzr.3,uc003hzs.3,uc011cft.1_5end | |||
|cluster_id=chr4:110723252..110723291,- | |||
|coexpression_cluster_id=C4359 | |||
|description=CAGE_peak_2_at_CFI_5end | |||
|id=chr4:110723252..110723291,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.26e-19!115;UBERON:0000119!1.91e-14!312;UBERON:0000483!3.47e-14!309;UBERON:0000477!1.36e-13!286;UBERON:0004111!9.25e-13!241;UBERON:0003075!9.55e-13!86;UBERON:0007284!9.55e-13!86;UBERON:0002346!4.30e-11!90;UBERON:0005743!5.42e-11!86;UBERON:0000025!7.56e-11!194;UBERON:0000481!1.26e-10!347;UBERON:0000467!2.24e-10!625;UBERON:0000480!3.32e-10!626;UBERON:0001017!1.04e-09!82;UBERON:0000073!1.96e-09!94;UBERON:0001016!1.96e-09!94;UBERON:0000468!2.84e-09!659;UBERON:0000490!2.70e-08!138;UBERON:0003056!5.14e-08!61;UBERON:0001049!9.22e-08!57;UBERON:0005068!9.22e-08!57;UBERON:0006241!9.22e-08!57;UBERON:0007135!9.22e-08!57;UBERON:0000062!1.21e-07!511;UBERON:0002050!1.41e-07!605;UBERON:0005423!1.41e-07!605;UBERON:0000955!1.43e-07!69;UBERON:0006238!1.43e-07!69;UBERON:0007625!1.74e-07!11;UBERON:0000922!2.28e-07!612;UBERON:0002616!2.32e-07!59;UBERON:0000923!2.69e-07!604;UBERON:0005291!2.69e-07!604;UBERON:0006598!2.69e-07!604;UBERON:0002532!2.69e-07!604;UBERON:0001048!3.43e-07!168;UBERON:0000475!4.21e-07!365;UBERON:0003103!7.84e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;9.25e-09;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.90e-18,114;UBERON:0000483,4.49e-09,306;UBERON:0004111,5.56e-09,240;UBERON:0000119,5.57e-09,309;UBERON:0007625,6.02e-09,11;UBERON:0001048,2.75e-08,160;UBERON:0003075,5.42e-08,82;UBERON:0007284,5.42e-08,82;UBERON:0010314,6.35e-08,132;UBERON:0003103,9.36e-08,68;UBERON:0002346,5.00e-07,86;UBERON:0007100,5.57e-07,27;UBERON:0000025,8.18e-07,192;UBERON:0005423,8.65e-07,581 | |||
|phase1_expression=0,0.428201047781966,3.52386010239928,1.0007329835313,0.893922188854576,0.872338524100369,0,0,0,0.491467873003018,0,0,0,0.618831764800233,0,0,0,0,0,0.246242116153576,0.408001382488506,2.19418305034661,17.1741592278634,6.56997240349844,4.77062030460251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,48.7613732627923,30.8522395463673,18.795796590999,0,0,6.37324683427624,0.795285947051099,1.45990461090791,13.1403395858054,10.1995522832779,8.4321394265401,4.45328856692223,0.364295288292542,0.370784442784429,0.97364218096405,2.78607579678828,2.52620124985844,0,0,0,0.79504962946682,0.860234595106124,0.694281003215189,0.56530794192401,1.67799774483962,3.02629846134074,0.208994966536811,20.1565072152077,37.7112238447913,15.0624275744102,1.61131726843659,0.760272105718513,4.14905497831888,3.30896772311282,3.24056779152704,17.5027467436796,7.63399866928977,5.40535106319947,0,0,0.366403487860815,0,0,0,0.496971951695318,0.379891534993739,1.58891016975863,10.6129549677061,2.83734705758686,4.48542080113846,0,2.22000793575444,11.5148083097914,0.538842688278752,0.653847612453835,0.151357427644931,1.72852777344,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0.438977620880838,0,0.150238058906597,2.7223723958405,0.538168907066586,0.427114777637135,0.635795703478686,0,0.309157587715317,0.257640540045629,0,0.168776332241266,0,0.757301322732344,0.368199594569197,0,1.42003837006646,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0.196221465125346,0,0,0,8.231480226628,5.88034845542168,16.478154526838,12.7767538168091,16.5421173870793,0,0.245976877086227,10.6372042385086,0,0,0,0,0,0,17.3197610430328,12.8682749522335,17.2590780526658,8.37325397014228,3.24089858803628,11.2249949818413,0,0,0,0,0,0,0.16798212819886,0,0,0.290633938513962,0.383382679165211,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,2.1798003441664,0.51336800074665,1.55126058909333,0,0,1.59562869950922,0,0.257207374262142,0,0,6.29103172095849,1.08524321078289,0,1.30294473717494,3.909311436168,1.58390374586686,42.8043915424612,23.5314033822079,37.8897636579996,0,0,0,0,0,2.85273810081437,0.289562613335158,0.61642896765115,0.179060963239896,0,0,0,0,9.40150109623115,7.8083912314573,4.63973287666617,6.5331343480396,6.37938751653163,0,0,0,2.4538298343828,0,0.542530047399471,1.45579603071565,0,0,0.234282829985426,0.300946099727719,0,0,0.664225598535437,0,1.39013783148933,0,0,0,0,0,0,0,0,0.248107807818777,0,0,3.58789617915963,1.02341449813341,2.0911009748669,0,0,3.01854933032316,2.7101961484557,0.519254429183621,0.348631135379878,0,1.20303882181971,0,9.52959919766236,0.546273504020151,2.09799063935079,0,1.23224539367064,0,0,3.37765212457202,1.13733384070897,0,3.02282282542995,0,1.08378575017541,0.501689773854853,1.01950509218015,0,0.223874754722178,0,0,12.3096060055867,2.95213181129735,1.95227036798582,19.3717101897718,6.3182930724657,9.32357349102644,0,0,25.7094287750655,2.03008508413456,2.7728751080636,1.22802939780904,0.137836572484531,9.56040179327635,3.33538396002726,0.93749290157711,5.43095417445098,0.165284915360978,0,0,0,0,3.1481234683064,0,0.308033580176089,0,0,0,0,0.744316738719335,0.949138274156178,8.95961911441977,0,1.71175595213568,3.18203247925937,0,3.77732160924961,10.4324071299701,6.36186972666707,0,0,0,0,0,0,1.50149902548784,9.33275850894504,4.52032466480971,0,0,0,0.578775534266688,3.9353685122798,0,0.30982349809975,0,1.14729081763241,0.392996164052485,0,1.41904425628239,2.9555068941673,5.59801318031833,0,0,0,0,0,19.2053353584629,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0.199579371432817,0,1.90506224451495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.098700508785,2.8071081061233,11.5741461624796,0,0.445773537109913,0,0,0,0,0,3.51673541026282,0.779160935160341,19.7764649072111,0.422250816255987,5.18044769452781,5.24939439509181,0,2.14764233254525,0.246169610922139,0,0.0898683511473268,1.07412704805365,0,6.90503839458535,0,0,2.90799823828566,2.22643435588443,0,0,0,8.69999490521752,0.1137934482855,12.2041752140528,0,0,0,0.347249989866585,0,3.0149109656352,1.52581736317083,1.87984741883082,0,1.31631238292384,3.92178468668365,0.278847488557207,11.4655885170658,0.569710279235006,0,0,0,1.27600463892768,1.37396390102793,0.533034776018635,0,0,0.831058409500782,0.225595660617181,0,0,0,0,0,1.14262965711403,0,0.216388639742091,0,10.3495350468907,3.05515072466813,4.74433805888995,7.66096421468318,10.546616900051,0.876214728748802,8.82835412028668,0.468528891450678,0,4.50028623543806,0,3.94584402849391,10.8891644443797,0.91821828489147,7.45601639616158,0,0.103688191397247,0,0,0,0,1.99226682220855,0,0.173559738335131,0,0,12.4055934451841,0,0.387025325156341,0.292357268344742,0.246346371159628,9.79589066533036,0,10.169133335124,0.274083849293502,0,0.50648636764703,0.391102765469606,2.08412932653988,7.04394882639863,5.79447867788178,0,0,0,0.288109595976299,14.0405365188939,0.235694034616795,1.08723364858891,0.836822770498666,3.46793939963494,1.73370353940911,0,2.60120219894787,0,13.3227286840187,0,12.2884256559792,5.72901060029209,10.7680953686522,1.39775300349294,2.14613024068285,5.80245789348869,3.15762320687613,0.360299883542404,0,2.20592910460226,1.56590130924216,1.75249214020881,9.25218326238639,0,1.59045937961861,3.26888174667781,0,0,0,0.2249738915515,0.77380195455795,0.303747783290123,0,22.0655980437755,4.77336752028483,0,0,0,15.7232971802141,5.95882773328889,0,0.542999601753713,4.32110745600634,0.326587360109409,11.9730191562487,0.082092520749339,1.70388021785422,12.6909542502541,21.5431783506781,2.65013777824443,0.775697738169303,4.36367585750877,0.342173675768659,0,12.0669776201495,1.25763444079733,7.87054205159671,5.95399226174341,0,0,15.9585314442545,1.63205341010842,1.7548292581589,1.53172788381731,0.983617892129413,0,0,0.366078794705889,4.88244629755349,3.44045517414043,4.43716206147409,3.04272374412779,0.553394539744923,0,17.2879993997479,0,0,0,0,1.64180283175561,1.8697064787778,3.88364103051829,2.84104507912634,11.3205555788659,39.1516937502476,1.14420034198462,9.07385542579434,2.02068360757615,0,4.61960624774737,0,5.43420349066908,4.14706207840855,4.78515086204391,2.08698024724694,29.3002337544576,14.0897928502454,6.50993173127459,0.363697318405119,8.16320233522912,2.78420255927096,4.77715066438339,0,4.46414416737631,2.35724642136143,0,0.192619830407303,5.57548137574807,0,4.30741258473318,2.54674721756217,0.244736704506468,0.179088841081487,0.926404341482917,25.2176657015513,0,1.15748422962549,0.675769762612291,0,0,0.303859956177382,3.73297777609673,0,0,0.327130788511688,0.327609848846413,3.68659363130579,0,14.5990798974099,0,27.2099667864089,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0.352675943690684,0.918736432059601,0.706521476061055,0,3.19267718114303,0.615349092722265,0.252071696221718,0.345786262321089,1.29180516505481,2.85538840518309,0.490738592505128,0,0.183428598521679,0.577628330751691,1.52552838186867,0,0,20.6076299676965,0,3.90757005616546,0,1.14640342257068,0.739280431085226,0.675375846183947,0.781078098613847,3.51367554052013,0.760989722326882,0,1.64477330057155,8.9318012110073,0,16.098065882589,2.67850917939143,4.03540466662589,1.82089681270989,7.51285231459282,4.96733272910777,0,7.37398440580899,1.15548546060614,0.591954962065642,0,0,9.18369186351014,1.09980912941201,0,3.65263488203798,2.15927591218621,5.7330202546446,11.0073878032051,0,0,2.26015753993353,0.801711364730253,0,0,0,0,0.236664001461131,0.340853619036631,4.23387050190929,0.9164274741762,0.31020638566432,0,0,0.294450700845729,0,2.58971534875158,2.97722139883116,2.3196288626764,4.85710993059139,0,0.198950775161368,0,0.11294608203896,0,0,10.6500338188964,20.326039126868,0,2.45148321753905,0,4.51509474364374,7.72320640850424,7.6078030965012,0.509781344063451,19.7366227757693,8.70181487643292,0,2.67830907908486,0,0.0802413666891683,1.46067277649303,2.2936464170227,3.44014999563483,0,0.407948941145488,0,14.8127515344312,1.85997509083376,4.15958065768276,0.432626562123789,0,0,0,0,0,0,0,9.54811597549817,1.07185652062471,0.829169439458779,2.68925789240928,3.41174371041569,4.99935306073855,0.387533459016037,1.67601728598816,0.448527450322454,10.5017811158972,3.84022659020617,3.26575121845442,5.81796611844978,3.03084238565644,10.1128309603674,2.66128285236811,3.5003405502719,0,1.9307228228694,0.269475606319761,11.7320471201727,4.88965776731466,11.3930929928407,9.32059483859718,3.22038069745642,0 | |||
|short_description=p2@CFI | |||
}} |
Latest revision as of 16:21, 24 September 2015
Short description: | p2@CFI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CFI_5end |
Coexpression cluster: | C4359_mesenchymal_Mesothelial_Endothelial_Cardiac_mesothelioma_myeloma_anaplastic |
Association with transcript: | 43bp_to_ENST00000394634, NM_000204, uc003hzr.3, uc003hzs.3, uc011cft.1_5end |
EntrezGene: | CFI |
HGNC: | 5394 |
UniProt: | P05156A8K3L0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 6.90e-18 | 114 |
epithelium | 4.49e-09 | 306 |
anatomical conduit | 5.56e-09 | 240 |
cell layer | 5.57e-09 | 309 |
pigment epithelium of eye | 6.02e-09 | 11 |
primordium | 2.75e-08 | 160 |
neural plate | 5.42e-08 | 82 |
presumptive neural plate | 5.42e-08 | 82 |
structure with developmental contribution from neural crest | 6.35e-08 | 132 |
compound organ | 9.36e-08 | 68 |
neurectoderm | 5.00e-07 | 86 |
primary circulatory organ | 5.57e-07 | 27 |
tube | 8.18e-07 | 192 |
developing anatomical structure | 8.65e-07 | 581 |