FFCP PHASE1:Hg19::chr17:41623634..41623645,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:41623634..41623645,-
|short_description=p15@ETV4
|description=CAGE_peak_15_at_ETV4_5end
|association_with_transcript=45bp_to_ENST00000545954_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2118 | |EntrezGene=2118 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3493 | |HGNC=3493 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z5J3 | |UniProt=B7Z5J3 | ||
|association_with_transcript=45bp_to_ENST00000545954_5end | |||
|cluster_id=chr17:41623634..41623645,- | |||
|description=CAGE_peak_15_at_ETV4_5end | |||
|id=chr17:41623634..41623645,- | |||
|ontology_enrichment_celltype=CL:0000066!5.39e-15!254;CL:0000223!3.95e-10!59;CL:0002321!1.10e-09!248;CL:0000220!4.39e-09!246;CL:0002076!9.29e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000182;7.69e-12;12!CL:0000540;5.19e-09;6!CL:0000404;5.19e-09;6!CL:0000039;1.28e-07;7!CL:0000586;1.28e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.15e-12,12;CL:0000540,3.81e-09,6;CL:0000031,3.81e-09,6;CL:0000404,3.81e-09,6;CL:0000066,3.40e-08,253;CL:0000039,8.70e-08,7;CL:0000586,8.70e-08,7;CL:0000047,5.85e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000031;5.19e-09;6!UBERON:0004161;1.07e-08;11!UBERON:0001041;2.47e-08;30!UBERON:0009497;2.31e-07;13 | |||
|ontology_enrichment_disease=DOID:305!6.27e-12!106;DOID:162!5.75e-11!235;DOID:14566!3.49e-10!239;DOID:0050687!4.12e-10!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.66e-08,106;DOID:0060085,9.79e-07,1;DOID:3165,9.79e-07,1;DOID:0060121,9.79e-07,1;DOID:2438,9.79e-07,1;DOID:4418,9.79e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001007!1.67e-07!155;UBERON:0001555!1.67e-07!155;UBERON:0007026!1.67e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0002365;1.44e-07;31!UBERON:0002330;1.44e-07;31!UBERON:0002107;2.29e-07;19!UBERON:0006925;2.29e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,3.37e-08,31;UBERON:0002330,3.37e-08,31;UBERON:0002107,2.19e-07,19;UBERON:0006925,2.19e-07,19;UBERON:0008836,2.19e-07,19;UBERON:0001048,2.74e-07,160;UBERON:0000473,7.30e-07,8 | |||
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| ||
|short_description=p15@ETV4 | |||
}} | }} |
Latest revision as of 18:32, 24 September 2015
Short description: | p15@ETV4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_ETV4_5end |
Coexpression cluster: | NA |
Association with transcript: | 45bp_to_ENST00000545954_5end |
EntrezGene: | ETV4 |
HGNC: | 3493 |
UniProt: | B7Z5J3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.15e-12 | 12 |
neuron | 3.81e-09 | 6 |
neuroblast | 3.81e-09 | 6 |
electrically signaling cell | 3.81e-09 | 6 |
epithelial cell | 3.40e-08 | 253 |
germ line cell | 8.70e-08 | 7 |
germ cell | 8.70e-08 | 7 |
neuronal stem cell | 5.85e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
exocrine gland | 3.37e-08 | 31 |
exocrine system | 3.37e-08 | 31 |
liver | 2.19e-07 | 19 |
digestive gland | 2.19e-07 | 19 |
liver bud | 2.19e-07 | 19 |
primordium | 2.74e-07 | 160 |
testis | 7.30e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.66e-08 | 106 |
organ system benign neoplasm | 9.79e-07 | 1 |
skin benign neoplasm | 9.79e-07 | 1 |
integumentary system benign neoplasm | 9.79e-07 | 1 |
dermis tumor | 9.79e-07 | 1 |
cutaneous fibrous histiocytoma | 9.79e-07 | 1 |