FFCP PHASE1:Hg19::chr22:39868786..39868797,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4248 | |EntrezGene=4248 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7046 | |HGNC=7046 | ||
|TSSclassifier=strong | |||
|UniProt=B0QY93 | |UniProt=B0QY93 | ||
|association_with_transcript=0bp_to_ENST00000429402_5end | |association_with_transcript=0bp_to_ENST00000429402_5end | ||
|cluster_id=chr22:39868786..39868797,+ | |||
|description=CAGE_peak_7_at_MGAT3_5end | |description=CAGE_peak_7_at_MGAT3_5end | ||
|id=chr22:39868786..39868797,+ | |id=chr22:39868786..39868797,+ | ||
|ontology_enrichment_celltype=CL:0000039!2.31e-09!7;CL:0000586!2.31e-09!7;CL:0002541!2.60e-09!3 | |ontology_enrichment_celltype=CL:0000039!2.31e-09!7;CL:0000586!2.31e-09!7;CL:0002541!2.60e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0002541;5.22e-23;3!CL:0002537;3.20e-14;5!CL:0000349;9.11e-14;19!CL:0000039;3.38e-10;7!CL:0000586;3.38e-10;7!CL:0002563;2.40e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,5.23e-23,3;CL:0002537,4.18e-14,5;CL:0000349,1.04e-13,19;CL:0000039,3.60e-10,7;CL:0000586,3.60e-10,7;CL:0002563,2.40e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0006242;5.28e-09;1!UBERON:0003124;1.65e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;3.87e-09;1!DOID:10165;3.87e-09;1!DOID:1798;3.87e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,3.87e-09,1;DOID:10165,3.87e-09,1;DOID:1798,3.87e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.64e-14!14;UBERON:0000158!1.64e-14!14;UBERON:0000160!8.64e-12!27;UBERON:0005409!1.67e-11!35;UBERON:0003124!9.92e-10!7;UBERON:0000476!2.60e-09!3;UBERON:0000920!2.60e-09!3;UBERON:0002110!1.04e-08!3;UBERON:0006242!1.04e-08!3;UBERON:0000478!1.14e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.47e-26;10!UBERON:0000158;1.47e-26;10!UBERON:0000160;2.41e-25;17!UBERON:0003124;5.22e-23;3!UBERON:0000920;5.22e-23;3!UBERON:0005409;1.31e-19;22!UBERON:0000478;1.92e-14;24!UBERON:0002108;2.55e-14;4!UBERON:0004921;3.44e-11;33!UBERON:0000059;8.23e-11;11!UBERON:0000305;2.63e-10;7!UBERON:0002171;5.28e-09;1!UBERON:0006518;5.28e-09;1!UBERON:0008949;5.28e-09;1!UBERON:0000101;5.28e-09;1!UBERON:0002167;5.28e-09;1!UBERON:0001242;2.40e-08;4!UBERON:0001262;2.40e-08;4!UBERON:0004786;2.40e-08;4!UBERON:0004808;2.40e-08;4!UBERON:0001277;2.40e-08;4!UBERON:0001052;4.15e-08;4!UBERON:0001155;7.02e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.86e-25,17;UBERON:0005631,3.60e-25,14;UBERON:0000158,3.60e-25,14;UBERON:0000920,5.23e-23,3;UBERON:0005409,2.66e-17,25;UBERON:0003124,4.34e-17,7;UBERON:0002108,2.13e-14,4;UBERON:0000478,2.27e-14,24;UBERON:0000059,7.42e-11,11;UBERON:0000305,3.17e-10,7;UBERON:0004871,5.24e-09,8;UBERON:0002171,6.16e-09,1;UBERON:0006518,6.16e-09,1;UBERON:0008949,6.16e-09,1;UBERON:0000101,6.16e-09,1;UBERON:0002167,6.16e-09,1;UBERON:0001242,2.40e-08,4;UBERON:0001262,2.40e-08,4;UBERON:0004786,2.40e-08,4;UBERON:0004808,2.40e-08,4;UBERON:0001277,2.40e-08,4;UBERON:0001052,4.63e-08,4;UBERON:0001155,5.94e-08,9;UBERON:0004923,1.00e-07,66 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0.655324116390517,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44367627920718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,2.05461064305758,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0.334330152832435,0,3.34242278632766,3.26661148915902,2.15012491469462,0,0,0,0,0,0.19924798825107,0,0.251932747854276,0,0.492339221844278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.692552326534174,0,1.38338342632836,2.60297168788339,12.4944477710309,2.23300811812344,1.92354946143911,9.59462596833542,0,0,0.166211681900156,0,0,0,0.189753732724185,0,0,0,1.69623685720729,0,1.99052386215701,3.98059040265026,0.611030144933625,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0.694238953340524,0.195984794828755,0,0,0,0,0,0,0,0,0,0,0,0,0.977756913674015,0.240476460754601,3.84215390530835,0.19980960958213,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961086713109252,0.628817220398664,3.31391244277756,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56302802246618,4.7143205006656,0,0.887136517302272,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50794029276486,0,0,0,0,0,0,0,0,1.40136081656895,0,0,0,0,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0.098150233615243,1.95068679971631,0,0,0,0,0,0,0,0,0,0,7.40871917836269,3.49695296806332,2.35158648180761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.645134202577,0,0,0,0,0,0,0.101988829741982,0,0.36757959813938,0,0,0,0,0,0.213233981900981,0,0,0.248298857183432,0,0,0,0,0,0.134704106029175,0.215166616178029,0.332660356546013,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | ||
|short_description=p7@MGAT3 | |short_description=p7@MGAT3 | ||
}} | }} |
Latest revision as of 18:48, 24 September 2015
Short description: | p7@MGAT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_MGAT3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000429402_5end |
EntrezGene: | MGAT3 |
HGNC: | 7046 |
UniProt: | B0QY93 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 5.23e-23 | 3 |
amnion mesenchymal stem cell | 4.18e-14 | 5 |
extraembryonic cell | 1.04e-13 | 19 |
germ line cell | 3.60e-10 | 7 |
germ cell | 3.60e-10 | 7 |
intestinal epithelial cell | 2.40e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.86e-25 | 17 |
extraembryonic membrane | 3.60e-25 | 14 |
membranous layer | 3.60e-25 | 14 |
egg chorion | 5.23e-23 | 3 |
gastrointestinal system | 2.66e-17 | 25 |
chorion | 4.34e-17 | 7 |
small intestine | 2.13e-14 | 4 |
extraembryonic structure | 2.27e-14 | 24 |
large intestine | 7.42e-11 | 11 |
amnion | 3.17e-10 | 7 |
somatic layer of lateral plate mesoderm | 5.24e-09 | 8 |
lower lobe of right lung | 6.16e-09 | 1 |
right lung lobe | 6.16e-09 | 1 |
lower lobe of lung | 6.16e-09 | 1 |
lobe of lung | 6.16e-09 | 1 |
right lung | 6.16e-09 | 1 |
intestinal mucosa | 2.40e-08 | 4 |
wall of intestine | 2.40e-08 | 4 |
gastrointestinal system mucosa | 2.40e-08 | 4 |
gastrointestinal system epithelium | 2.40e-08 | 4 |
intestinal epithelium | 2.40e-08 | 4 |
rectum | 4.63e-08 | 4 |
colon | 5.94e-08 | 9 |
organ component layer | 1.00e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 3.87e-09 | 1 |
endocrine pancreas cancer | 3.87e-09 | 1 |
pancreatic endocrine carcinoma | 3.87e-09 | 1 |