FFCP PHASE1:Hg19::chr11:102980234..102980243,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:102980234..102980243,+ to FFCP PHASE1:Hg19::chr11:102980234..102980243,+: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79659 | |EntrezGene=79659 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2962 | |HGNC=2962 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-7bp_to_ENST00000334267_5end | |||
|cluster_id=chr11:102980234..102980243,+ | |||
|coexpression_cluster_id=C3072 | |||
|description=CAGE_peak_5_at_DYNC2H1_5end | |||
|id=chr11:102980234..102980243,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.23e-08!180 | |||
|ontology_enrichment_celltype_v019=CL:0000346;7.26e-16;3!CL:1000428;7.26e-16;3!CL:0002601;2.91e-12;1!CL:1000306;3.09e-12;4!CL:0002547;3.09e-12;4!CL:0002559;6.80e-10;5!CL:0002540;2.17e-08;6!CL:0002535;4.55e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,6.26e-16,3;CL:1000428,6.26e-16,3;CL:1000306,3.65e-12,4;CL:0002547,3.65e-12,4;CL:0002601,4.31e-12,1;CL:0002559,6.22e-10,5;CL:0002540,2.25e-08,6;CL:0002535,4.56e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.68e-08!365;UBERON:0000924!7.93e-07!173;UBERON:0006601!7.93e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;4.13e-23;2!UBERON:0000412;7.26e-16;3!UBERON:0001992;7.26e-16;3!UBERON:0004797;3.09e-12;4!UBERON:0000415;3.09e-12;4!UBERON:0007240;3.09e-12;4!UBERON:0005742;3.09e-12;4!UBERON:0005734;3.09e-12;4!UBERON:0004664;3.09e-12;4!UBERON:0004663;3.09e-12;4!UBERON:0003296;4.69e-12;4!UBERON:0010133;4.69e-12;4!UBERON:0002073;6.80e-10;5!UBERON:0001894;2.91e-07;7!UBERON:0006955;4.55e-07;2!UBERON:0004801;4.55e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,3.91e-23,2;UBERON:0000412,6.26e-16,3;UBERON:0001992,6.26e-16,3;UBERON:0000415,3.65e-12,4;UBERON:0007240,3.65e-12,4;UBERON:0005742,3.65e-12,4;UBERON:0005734,3.65e-12,4;UBERON:0004664,3.65e-12,4;UBERON:0004663,3.65e-12,4;UBERON:0003296,4.57e-12,4;UBERON:0010133,4.57e-12,4;UBERON:0002073,6.22e-10,5;UBERON:0005086,6.22e-10,5;UBERON:0004797,2.52e-07,7;UBERON:0001894,2.86e-07,7;UBERON:0006222,2.86e-07,7;UBERON:0006955,4.56e-07,2;UBERON:0004801,4.56e-07,2 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.422863212287913,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0.331397375727916,0,0.602694528023977,0,0,0.123121058076788,0,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.12786256184353,0.722878304769133,0,0.434539556882471,0,0,0.378139268656271,0.443458794925128,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1185468930115,2.29469296599051,0,0,0,0.24666754841716,0,0.269421344139376,0.163461903113459,0.151357427644931,0,0,0.624320153660641,0,0.448346041655403,0.587172493218824,0.323745888736263,0.561803226808994,0.61246251376468,0.122834317311768,0.413303124703062,1.18800285728205,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0.600952235626387,0,0.538168907066586,0,0,0.600182192168805,0.412210116953756,0,0,0.337552664482532,0.194874010322397,0.757301322732344,0.184099797284599,0.484938170456436,1.06502877754984,0.302256294682921,0.169560592310488,0,0,0,0.121973706129595,0.265059536642971,0.116193942869518,0.10366105501537,0,0.36497735907583,3.12899064659632,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.343135620597051,0.109750285408626,0,0.402115889646523,0,0.325808305310325,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0.246217006087397,0,0,0,0,0.567100388969546,0.358234090811393,0,0,0,0.088048434013226,0.207328115540772,0,0.12624243342638,0.317489471460845,0,0,0,0,0.300343057843917,0.857479297891735,0,0,0.1466765716419,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,1.20575750823834,0,0.299918973546171,0,0,0,0,0,0,0.289562613335158,0.821905290201534,0.358121926479791,0.112085143993527,0.197030760201927,0,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0.271265023699736,0.415941723061614,0,0.315404830067869,0.468565659970853,0,0,0,0.664225598535437,0.184369168541703,0.260650843404249,0,0,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0.280660094433074,0.384417447767103,0.511707249066704,0,0,0.462629081407967,0,0.410635780069046,0,0.232420756919918,0,0,0.0920809889358963,0.114814448164607,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0.328014645699706,0,0,0.0915694648183434,0.082509499920588,0,0,0,0.386682873168488,0,0.460511024178389,0.413509717453592,0.214840489736547,0.290033387828457,0.0852266274161009,0,0,0,0.255225424989168,0.10115778085555,0,0.94443704049192,0,0,0,0,0,0,0.372158369359667,0.949138274156178,0,0.255897791311334,0,0,0,0.179872457583315,0.54907405947211,0.353437207037059,0,0,0.421258456238981,0,0,0,0.682499557039929,0.282810863907425,0,0,0,0,0,0.655894752046633,0,0,0,0.430234056612155,0.0982490410131212,0,1.06428319221179,0.422215270595328,0.658589785919804,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747768497892312,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0.343505344755765,0.307240764308458,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0.606802608747567,0,0,0,0,0,0.994147647766298,0,0,0.16480387422676,0.844501632511974,0.19924798825107,0,0.755798243562828,0.102268682502155,0.123084805461069,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0.0874599999961957,0,0.227586896570999,0.508507300585533,0,0.344743373241465,0.874813840149763,0.173624994933292,0,0.120596438625408,0,0,0,0,0.10893846351899,0.975966209950223,0.153900517007594,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0.242780379534093,0,0,0,0.189559738885464,2.40517471063188,0.622129148383483,0,0,0,0,0,0.138674673013139,0,0.195984794828755,10.4471047896483,0,0.343972064943233,0,0.219267951258557,0,0,0.176512253383001,0,0,0.596143835108969,0.189932387867636,0.391102765469606,0,0,0,0.144090417154106,0.343609788497747,0.686379991447858,0,0.248505071130865,0.235694034616795,0,0.418411385249333,0.509991088181609,0.577901179803038,0,0.136905378891993,0,0.429765441419957,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0.321506296930038,0,0,0,0,0.121499113316049,0,0,0.0524545881349981,0,0.35857467866569,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0.566560457600628,0,0,0.258565912723101,0.26446520348538,0.342173675768659,0,0.106787412567695,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0.612691153526923,0.327872630709804,0.157054096250234,0,0.366078794705889,0.500763722825999,0,0,0.0620964029413835,0.138348634936231,0,0.454947352624943,0,0,0,0.144921028610825,0.447764408660622,0.233713309847224,0.554805861502613,1.13641803165053,0.50313580350515,3.55924488638614,1.37304041038154,0.302461847526478,0.310874401165561,0.73927574994817,0.159296767163702,0,0.931577741257556,0,0.265841714557995,0,0.901545653983311,0.761610424337591,0.406870733204662,0.363697318405119,0.644463342254931,0,0.796191777397232,0,0,0.336749488765919,0,0.385239660814607,0,0.260994291965212,0.226705925512272,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0.983091635014877,0,0,0.533458648470704,0,0,0,0,0,0.383683113910955,0,0.629063767423586,0.109209638192014,1.01839517972415,0.850299680406731,0.371807292777007,0.558644917973244,0,0,0,0,0,0.256916900385838,0,0.159633859057151,0.205116364240755,0.252071696221718,0.138314504928436,0.161475645631851,0,0.687034029507179,0.235939446695481,0,0.115525666150338,0.381382095467167,0.690359926060101,1.98916222116275,0.0752103283492573,0,0,0,0.163771917510097,0,0.202612753855184,0.781078098613847,0.206686796501184,0.126831620387814,0.546974809018219,0,0.992422356778588,0.351742488719241,0.766574565837572,0,0.336283722218824,2.42786241694653,1.13831095675649,0.177404740325278,0,0,0.203909198930495,0.0657727735628491,0.118193840883968,0.333694205676207,0.156986185701028,0.157115589916002,0,0.913158720509496,0,0,0,0.632054446930906,0.464965701472501,0.347716544605159,0,0.414432328326074,0.3414369541879,0,0,0.591660003652827,0.340853619036631,0.423387050190929,0,0.31020638566432,0.955538938977433,0,0,0,0,0,0,0,0,0,0.951360726220549,0.22589216407792,0,0.150962843566674,0,0,0,0,0,0.392616934229891,0,0.4226557275834,0.169927114687817,0,0,0,0,0,0.0802413666891683,0,0,0,0.315543124386369,0.0679914901909147,0,0,0,0,0,0.378499274505237,0.327796715891087,0.253397002022874,0,0,0.0918948995348449,0,0.0757786982182394,0.267964130156178,0,0.103432995861895,0.426467963801962,0,0.0645889098360061,0.124149428591716,0.112131862580613,0,0,0.217716747896961,0,0,0.215166616178029,0,0.244209805832924,0.747091421144008,0,0,0,0,0,0,0,0 | |phase1_expression=0.363356758541113,0.642301571672949,0.422863212287913,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0.331397375727916,0,0.602694528023977,0,0,0.123121058076788,0,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.12786256184353,0.722878304769133,0,0.434539556882471,0,0,0.378139268656271,0.443458794925128,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1185468930115,2.29469296599051,0,0,0,0.24666754841716,0,0.269421344139376,0.163461903113459,0.151357427644931,0,0,0.624320153660641,0,0.448346041655403,0.587172493218824,0.323745888736263,0.561803226808994,0.61246251376468,0.122834317311768,0.413303124703062,1.18800285728205,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0.600952235626387,0,0.538168907066586,0,0,0.600182192168805,0.412210116953756,0,0,0.337552664482532,0.194874010322397,0.757301322732344,0.184099797284599,0.484938170456436,1.06502877754984,0.302256294682921,0.169560592310488,0,0,0,0.121973706129595,0.265059536642971,0.116193942869518,0.10366105501537,0,0.36497735907583,3.12899064659632,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.343135620597051,0.109750285408626,0,0.402115889646523,0,0.325808305310325,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0.246217006087397,0,0,0,0,0.567100388969546,0.358234090811393,0,0,0,0.088048434013226,0.207328115540772,0,0.12624243342638,0.317489471460845,0,0,0,0,0.300343057843917,0.857479297891735,0,0,0.1466765716419,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,1.20575750823834,0,0.299918973546171,0,0,0,0,0,0,0.289562613335158,0.821905290201534,0.358121926479791,0.112085143993527,0.197030760201927,0,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0.271265023699736,0.415941723061614,0,0.315404830067869,0.468565659970853,0,0,0,0.664225598535437,0.184369168541703,0.260650843404249,0,0,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0.280660094433074,0.384417447767103,0.511707249066704,0,0,0.462629081407967,0,0.410635780069046,0,0.232420756919918,0,0,0.0920809889358963,0.114814448164607,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0.328014645699706,0,0,0.0915694648183434,0.082509499920588,0,0,0,0.386682873168488,0,0.460511024178389,0.413509717453592,0.214840489736547,0.290033387828457,0.0852266274161009,0,0,0,0.255225424989168,0.10115778085555,0,0.94443704049192,0,0,0,0,0,0,0.372158369359667,0.949138274156178,0,0.255897791311334,0,0,0,0.179872457583315,0.54907405947211,0.353437207037059,0,0,0.421258456238981,0,0,0,0.682499557039929,0.282810863907425,0,0,0,0,0,0.655894752046633,0,0,0,0.430234056612155,0.0982490410131212,0,1.06428319221179,0.422215270595328,0.658589785919804,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747768497892312,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0.343505344755765,0.307240764308458,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0.606802608747567,0,0,0,0,0,0.994147647766298,0,0,0.16480387422676,0.844501632511974,0.19924798825107,0,0.755798243562828,0.102268682502155,0.123084805461069,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0.0874599999961957,0,0.227586896570999,0.508507300585533,0,0.344743373241465,0.874813840149763,0.173624994933292,0,0.120596438625408,0,0,0,0,0.10893846351899,0.975966209950223,0.153900517007594,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0.242780379534093,0,0,0,0.189559738885464,2.40517471063188,0.622129148383483,0,0,0,0,0,0.138674673013139,0,0.195984794828755,10.4471047896483,0,0.343972064943233,0,0.219267951258557,0,0,0.176512253383001,0,0,0.596143835108969,0.189932387867636,0.391102765469606,0,0,0,0.144090417154106,0.343609788497747,0.686379991447858,0,0.248505071130865,0.235694034616795,0,0.418411385249333,0.509991088181609,0.577901179803038,0,0.136905378891993,0,0.429765441419957,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0.321506296930038,0,0,0,0,0.121499113316049,0,0,0.0524545881349981,0,0.35857467866569,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0.566560457600628,0,0,0.258565912723101,0.26446520348538,0.342173675768659,0,0.106787412567695,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0.612691153526923,0.327872630709804,0.157054096250234,0,0.366078794705889,0.500763722825999,0,0,0.0620964029413835,0.138348634936231,0,0.454947352624943,0,0,0,0.144921028610825,0.447764408660622,0.233713309847224,0.554805861502613,1.13641803165053,0.50313580350515,3.55924488638614,1.37304041038154,0.302461847526478,0.310874401165561,0.73927574994817,0.159296767163702,0,0.931577741257556,0,0.265841714557995,0,0.901545653983311,0.761610424337591,0.406870733204662,0.363697318405119,0.644463342254931,0,0.796191777397232,0,0,0.336749488765919,0,0.385239660814607,0,0.260994291965212,0.226705925512272,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0.983091635014877,0,0,0.533458648470704,0,0,0,0,0,0.383683113910955,0,0.629063767423586,0.109209638192014,1.01839517972415,0.850299680406731,0.371807292777007,0.558644917973244,0,0,0,0,0,0.256916900385838,0,0.159633859057151,0.205116364240755,0.252071696221718,0.138314504928436,0.161475645631851,0,0.687034029507179,0.235939446695481,0,0.115525666150338,0.381382095467167,0.690359926060101,1.98916222116275,0.0752103283492573,0,0,0,0.163771917510097,0,0.202612753855184,0.781078098613847,0.206686796501184,0.126831620387814,0.546974809018219,0,0.992422356778588,0.351742488719241,0.766574565837572,0,0.336283722218824,2.42786241694653,1.13831095675649,0.177404740325278,0,0,0.203909198930495,0.0657727735628491,0.118193840883968,0.333694205676207,0.156986185701028,0.157115589916002,0,0.913158720509496,0,0,0,0.632054446930906,0.464965701472501,0.347716544605159,0,0.414432328326074,0.3414369541879,0,0,0.591660003652827,0.340853619036631,0.423387050190929,0,0.31020638566432,0.955538938977433,0,0,0,0,0,0,0,0,0,0.951360726220549,0.22589216407792,0,0.150962843566674,0,0,0,0,0,0.392616934229891,0,0.4226557275834,0.169927114687817,0,0,0,0,0,0.0802413666891683,0,0,0,0.315543124386369,0.0679914901909147,0,0,0,0,0,0.378499274505237,0.327796715891087,0.253397002022874,0,0,0.0918948995348449,0,0.0757786982182394,0.267964130156178,0,0.103432995861895,0.426467963801962,0,0.0645889098360061,0.124149428591716,0.112131862580613,0,0,0.217716747896961,0,0,0.215166616178029,0,0.244209805832924,0.747091421144008,0,0,0,0,0,0,0,0 | ||
|short_description=p5@DYNC2H1 | |||
}} | }} |
Latest revision as of 18:53, 24 September 2015
Short description: | p5@DYNC2H1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_DYNC2H1_5end |
Coexpression cluster: | C3072_epidermoid_Fibroblast_neuroectodermal_Small_Skeletal_Smooth_embryonic |
Association with transcript: | -7bp_to_ENST00000334267_5end |
EntrezGene: | DYNC2H1 |
HGNC: | 2962 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 6.26e-16 | 3 |
stem cell of epidermis | 6.26e-16 | 3 |
fibroblast of tunica adventitia of artery | 3.65e-12 | 4 |
fibroblast of the aortic adventitia | 3.65e-12 | 4 |
uterine smooth muscle cell | 4.31e-12 | 1 |
hair follicle cell | 6.22e-10 | 5 |
mesenchymal stem cell of the bone marrow | 2.25e-08 | 6 |
epithelial cell of cervix | 4.56e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 3.91e-23 | 2 |
dermal papilla | 6.26e-16 | 3 |
papillary layer of dermis | 6.26e-16 | 3 |
artery wall | 3.65e-12 | 4 |
tunica adventitia of artery | 3.65e-12 | 4 |
adventitia | 3.65e-12 | 4 |
tunica adventitia of blood vessel | 3.65e-12 | 4 |
aorta tunica adventitia | 3.65e-12 | 4 |
aorta wall | 3.65e-12 | 4 |
gland of diencephalon | 4.57e-12 | 4 |
neuroendocrine gland | 4.57e-12 | 4 |
hair follicle | 6.22e-10 | 5 |
hair follicle placode | 6.22e-10 | 5 |
blood vessel layer | 2.52e-07 | 7 |
diencephalon | 2.86e-07 | 7 |
future diencephalon | 2.86e-07 | 7 |
uterine epithelium | 4.56e-07 | 2 |
cervix epithelium | 4.56e-07 | 2 |