FFCP PHASE1:Hg19::chr7:1022811..1022824,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54905 | |EntrezGene=54905 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20243 | |HGNC=20243 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TAV3,A6NJ10 | |UniProt=Q8TAV3,A6NJ10 | ||
|association_with_transcript=-10bp_to_ENST00000308919,NM_017781,uc003sjq.1,uc003sjr.1_5end | |association_with_transcript=-10bp_to_ENST00000308919,NM_017781,uc003sjq.1,uc003sjr.1_5end | ||
|cluster_id=chr7:1022811..1022824,+ | |||
|coexpression_cluster_id=C2364 | |||
|description=CAGE_peak_1_at_CYP2W1_5end | |description=CAGE_peak_1_at_CYP2W1_5end | ||
|id=chr7:1022811..1022824,+ | |id=chr7:1022811..1022824,+ | ||
|ontology_enrichment_celltype=CL:0000349!3.46e-07!3;CL:0002577!3.46e-07!3;CL:0002586!5.85e-07!3 | |ontology_enrichment_celltype=CL:0000349!3.46e-07!3;CL:0002577!3.46e-07!3;CL:0002586!5.85e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000349;3.92e-18;19!CL:0002577;2.98e-17;3!CL:0000575;1.40e-12;2!CL:0002537;2.74e-11;5!CL:0002586;2.59e-08;3!CL:0002252;4.99e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.49e-18,19;CL:0002577,2.38e-17,3;CL:0000575,1.44e-12,2;CL:0002537,2.69e-11,5;CL:0002586,2.96e-08,3;CL:0002252,5.14e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.23e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000478;5.97e-18;24!UBERON:0000160;2.35e-15;17!UBERON:0005409;2.99e-15;22!UBERON:0001052;1.10e-13;4!UBERON:0001987;4.41e-13;4!UBERON:0004921;1.77e-11;33!UBERON:0004907;4.75e-11;5!UBERON:0005631;1.47e-09;10!UBERON:0000158;1.47e-09;10!UBERON:0000059;9.37e-09;11!UBERON:0000922;1.05e-08;49!UBERON:0001781;2.59e-08;3!UBERON:0001782;2.59e-08;3!UBERON:0000020;2.90e-08;23!UBERON:0000305;3.43e-08;7!UBERON:0001032;6.76e-08;24!UBERON:0004456;6.76e-08;24!UBERON:0007029;3.10e-07;1!UBERON:0000970;7.21e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.15e-19,14;UBERON:0000158,3.15e-19,14;UBERON:0000478,5.39e-18,24;UBERON:0000160,2.43e-15,17;UBERON:0001052,1.17e-13,4;UBERON:0005409,2.33e-13,25;UBERON:0001987,3.72e-13,4;UBERON:0004340,3.72e-13,4;UBERON:0003124,5.45e-13,7;UBERON:0004907,5.01e-11,5;UBERON:0000059,9.66e-09,11;UBERON:0004923,2.49e-08,66;UBERON:0001782,2.96e-08,3;UBERON:0005424,2.96e-08,3;UBERON:0000305,3.39e-08,7;UBERON:0004921,6.23e-08,118;UBERON:0000020,7.26e-08,24;UBERON:0001032,7.26e-08,24;UBERON:0004456,7.26e-08,24;UBERON:0004119,7.54e-08,160;UBERON:0000925,7.54e-08,160;UBERON:0006595,7.54e-08,160;UBERON:0004871,3.19e-07,8;UBERON:0007029,3.20e-07,1 | |||
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| ||
|short_description=p1@CYP2W1 | |short_description=p1@CYP2W1 | ||
}} | }} |
Latest revision as of 19:05, 24 September 2015
Short description: | p1@CYP2W1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CYP2W1_5end |
Coexpression cluster: | C2364_small_rectum_colon_hepatocellular_duodenum_temporal_umbilical |
Association with transcript: | -10bp_to_ENST00000308919, NM_017781, uc003sjq.1, uc003sjr.1_5end |
EntrezGene: | CYP2W1 |
HGNC: | 20243 |
UniProt: | Q8TAV3A6NJ10 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.49e-18 | 19 |
placental epithelial cell | 2.38e-17 | 3 |
corneal epithelial cell | 1.44e-12 | 2 |
amnion mesenchymal stem cell | 2.69e-11 | 5 |
retinal pigment epithelial cell | 2.96e-08 | 3 |
epithelial cell of esophagus | 5.14e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.15e-19 | 14 |
membranous layer | 3.15e-19 | 14 |
extraembryonic structure | 5.39e-18 | 24 |
intestine | 2.43e-15 | 17 |
rectum | 1.17e-13 | 4 |
gastrointestinal system | 2.33e-13 | 25 |
placenta | 3.72e-13 | 4 |
allantois | 3.72e-13 | 4 |
chorion | 5.45e-13 | 7 |
lower digestive tract | 5.01e-11 | 5 |
large intestine | 9.66e-09 | 11 |
organ component layer | 2.49e-08 | 66 |
pigmented layer of retina | 2.96e-08 | 3 |
presumptive retinal pigmented epithelium | 2.96e-08 | 3 |
amnion | 3.39e-08 | 7 |
subdivision of digestive tract | 6.23e-08 | 118 |
sense organ | 7.26e-08 | 24 |
sensory system | 7.26e-08 | 24 |
entire sense organ system | 7.26e-08 | 24 |
endoderm-derived structure | 7.54e-08 | 160 |
endoderm | 7.54e-08 | 160 |
presumptive endoderm | 7.54e-08 | 160 |
somatic layer of lateral plate mesoderm | 3.19e-07 | 8 |
surface | 3.20e-07 | 1 |