FFCP PHASE1:Hg19::chr22:40342819..40342836,+: Difference between revisions
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|id=chr22:40342819..40342836,+
|short_description=p12@GRAP2
|description=CAGE_peak_12_at_GRAP2_5end
|association_with_transcript=0bp_to_ENST00000407075_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9402 | |EntrezGene=9402 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4563 | |HGNC=4563 | ||
|TSSclassifier=strong | |||
|UniProt=O75791 | |UniProt=O75791 | ||
|association_with_transcript=0bp_to_ENST00000407075_5end | |||
|cluster_id=chr22:40342819..40342836,+ | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_12_at_GRAP2_5end | |||
|id=chr22:40342819..40342836,+ | |||
|ontology_enrichment_celltype=CL:0000764!1.82e-14!2;CL:0000765!1.82e-14!2;CL:0000050!1.82e-14!2;CL:0000038!1.82e-14!2;CL:0000558!1.82e-14!2;CL:0000547!1.82e-14!2;CL:0000549!1.82e-14!2;CL:0000550!1.82e-14!2;CL:0000552!1.82e-14!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;1.11e-34;2!CL:0000558;1.11e-34;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.11e-34,2;CL:0000765,1.11e-34,2;CL:0000050,1.11e-34,2;CL:0000038,1.11e-34,2;CL:0000558,1.11e-34,2;CL:0000547,1.11e-34,2;CL:0000549,1.11e-34,2;CL:0000550,1.11e-34,2;CL:0000552,1.11e-34,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!3.39e-20!8 | |||
|ontology_enrichment_disease_v019=DOID:1036;4.88e-33;8!DOID:8692;4.36e-09;31!DOID:1240;2.10e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,4.68e-33,8;DOID:8692,8.30e-09,31;DOID:1240,4.73e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0000178!3.51e-26!15;UBERON:0000179!3.51e-26!15;UBERON:0000463!3.51e-26!15;UBERON:0000341!3.07e-13!2;UBERON:0007023!5.61e-08!115;UBERON:0002426!1.22e-07!1;UBERON:0003831!1.22e-07!1;UBERON:0003898!1.22e-07!1;UBERON:0004830!1.22e-07!1;UBERON:0001774!1.22e-07!1;UBERON:0003830!1.22e-07!1;UBERON:0005175!1.22e-07!1;UBERON:0003897!1.22e-07!1;UBERON:0001103!1.22e-07!1;UBERON:0010084!1.22e-07!1;UBERON:0001874!2.47e-07!1;UBERON:0002372!2.98e-07!1;UBERON:0001961!2.98e-07!1;UBERON:0001744!2.98e-07!1;UBERON:0001735!2.98e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.92e-18;15!UBERON:0000179;5.92e-18;15!UBERON:0000463;5.92e-18;15!UBERON:0002390;6.49e-12;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.80e-18,15;UBERON:0000179,5.80e-18,15;UBERON:0000463,5.80e-18,15 | |||
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|short_description=p12@GRAP2 | |||
}} | }} |
Latest revision as of 19:28, 24 September 2015
Short description: | p12@GRAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_GRAP2_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 0bp_to_ENST00000407075_5end |
EntrezGene: | GRAP2 |
HGNC: | 4563 |
UniProt: | O75791 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.11e-34 | 2 |
erythroblast | 1.11e-34 | 2 |
megakaryocyte-erythroid progenitor cell | 1.11e-34 | 2 |
erythroid progenitor cell | 1.11e-34 | 2 |
reticulocyte | 1.11e-34 | 2 |
proerythroblast | 1.11e-34 | 2 |
basophilic erythroblast | 1.11e-34 | 2 |
polychromatophilic erythroblast | 1.11e-34 | 2 |
orthochromatic erythroblast | 1.11e-34 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 5.80e-18 | 15 |
haemolymphatic fluid | 5.80e-18 | 15 |
organism substance | 5.80e-18 | 15 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 4.68e-33 | 8 |
myeloid leukemia | 8.30e-09 | 31 |
leukemia | 4.73e-07 | 39 |