FFCP PHASE1:Hg19::chr16:15815412..15815423,-: Difference between revisions
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|id=chr16:15815412..15815423,-
|short_description=p14@MYH11
|description=CAGE_peak_14_at_MYH11_5end
|association_with_transcript=12bp_to_BC080545_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4629 | |EntrezGene=4629 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7569 | |HGNC=7569 | ||
|TSSclassifier=strong | |||
|UniProt=Q66K75 | |UniProt=Q66K75 | ||
|association_with_transcript=12bp_to_BC080545_5end | |||
|cluster_id=chr16:15815412..15815423,- | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_14_at_MYH11_5end | |||
|id=chr16:15815412..15815423,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.63e-18;2!UBERON:0004874;1.80e-10;1!UBERON:0005754;1.98e-10;1!UBERON:0009143;3.39e-10;1!UBERON:0006242;4.64e-10;1!UBERON:0006603;4.02e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.06e-42!115;UBERON:0006947!3.73e-13!3;UBERON:0004054!3.73e-13!3;UBERON:0003135!7.06e-13!11;UBERON:0005904!5.74e-10!4;UBERON:0003101!3.64e-08!22;UBERON:0000079!3.64e-08!22;UBERON:0005409!3.40e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;6.32e-27;3!UBERON:0004054;6.32e-27;3!UBERON:0005904;2.31e-20;4!UBERON:0003135;7.68e-20;11!UBERON:0003101;6.56e-14;22!UBERON:0000079;6.56e-14;22!UBERON:0000160;5.94e-12;17!UBERON:0000989;1.80e-10;1!UBERON:0008811;1.80e-10;1!UBERON:0000998;1.98e-10;1!UBERON:0006868;1.98e-10;1!UBERON:0002146;2.59e-10;1!UBERON:0005623;2.59e-10;1!UBERON:0001000;3.39e-10;1!UBERON:0005352;3.39e-10;1!UBERON:0004175;3.40e-10;21!UBERON:0006834;7.88e-10;1!UBERON:0001301;7.88e-10;1!UBERON:0005409;2.54e-09;22!UBERON:0001155;3.60e-09;9!UBERON:0000058;1.79e-08;10!UBERON:0007023;4.41e-08;114!UBERON:0004921;4.79e-08;33!UBERON:0002108;5.30e-08;4!UBERON:0000059;1.37e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,5.07e-27,3;UBERON:0004054,5.07e-27,3;UBERON:0007023,8.91e-22,114;UBERON:0005904,1.96e-20,4;UBERON:0003135,6.83e-20,11;UBERON:0003101,6.06e-14,22;UBERON:0000079,6.06e-14,22;UBERON:0000160,5.41e-12,17;UBERON:0000989,1.80e-10,1;UBERON:0008811,1.80e-10,1;UBERON:0006258,1.80e-10,1;UBERON:0005876,1.80e-10,1;UBERON:0004874,1.80e-10,1;UBERON:0000998,1.98e-10,1;UBERON:0006868,1.98e-10,1;UBERON:0002146,2.59e-10,1;UBERON:0005623,2.59e-10,1;UBERON:0001000,3.10e-10,1;UBERON:0005352,3.10e-10,1;UBERON:0006834,5.79e-10,1;UBERON:0001301,6.91e-10,1;UBERON:0001155,3.04e-09,9;UBERON:0004175,1.34e-08,25;UBERON:0005156,1.91e-08,59;UBERON:0000990,1.91e-08,59;UBERON:0005409,2.97e-08,25;UBERON:0003133,3.55e-08,48;UBERON:0002108,5.69e-08,4;UBERON:0004876,7.86e-08,11;UBERON:0003064,8.62e-08,28;UBERON:0000059,1.19e-07,11 | |||
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| ||
|short_description=p14@MYH11 | |||
}} | }} |
Latest revision as of 19:42, 24 September 2015
Short description: | p14@MYH11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_MYH11_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | 12bp_to_BC080545_5end |
EntrezGene: | MYH11 |
HGNC: | 7569 |
UniProt: | Q66K75 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 5.07e-27 | 3 |
internal male genitalia | 5.07e-27 | 3 |
adult organism | 8.91e-22 | 114 |
duct of male reproductive system | 1.96e-20 | 4 |
male reproductive organ | 6.83e-20 | 11 |
male organism | 6.06e-14 | 22 |
male reproductive system | 6.06e-14 | 22 |
intestine | 5.41e-12 | 17 |
penis | 1.80e-10 | 1 |
intromittent organ | 1.80e-10 | 1 |
lateral plate mesenchyme | 1.80e-10 | 1 |
undifferentiated genital tubercle | 1.80e-10 | 1 |
somatopleure | 1.80e-10 | 1 |
seminal vesicle | 1.98e-10 | 1 |
seminal fluid secreting gland | 1.98e-10 | 1 |
pulmonary valve | 2.59e-10 | 1 |
semi-lunar valve | 2.59e-10 | 1 |
vas deferens | 3.10e-10 | 1 |
spermatic cord | 3.10e-10 | 1 |
uterus or analog | 5.79e-10 | 1 |
epididymis | 6.91e-10 | 1 |
colon | 3.04e-09 | 9 |
internal genitalia | 1.34e-08 | 25 |
reproductive structure | 1.91e-08 | 59 |
reproductive system | 1.91e-08 | 59 |
gastrointestinal system | 2.97e-08 | 25 |
reproductive organ | 3.55e-08 | 48 |
small intestine | 5.69e-08 | 4 |
urogenital ridge | 7.86e-08 | 11 |
intermediate mesoderm | 8.62e-08 | 28 |
large intestine | 1.19e-07 | 11 |