FFCP PHASE1:Hg19::chr4:114901128..114901136,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79642 | |EntrezGene=79642 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26286 | |HGNC=26286 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-245bp_to_ENST00000503013_5end | |association_with_transcript=-245bp_to_ENST00000503013_5end | ||
|cluster_id=chr4:114901128..114901136,- | |||
|description=CAGE_peak_20_at_ARSJ_5end | |description=CAGE_peak_20_at_ARSJ_5end | ||
|id=chr4:114901128..114901136,- | |id=chr4:114901128..114901136,- | ||
|ontology_enrichment_celltype=CL:0002620!1.91e-08!23 | |ontology_enrichment_celltype=CL:0002620!1.91e-08!23 | ||
|ontology_enrichment_celltype_v019=CL:0002569;2.19e-12;6!CL:0000128;9.43e-11;7!CL:0000126;9.43e-11;7!CL:0000127;9.43e-11;7!CL:0000081;2.32e-07;11 | |ontology_enrichment_celltype_v019=CL:0002569;2.19e-12;6!CL:0000128;9.43e-11;7!CL:0000126;9.43e-11;7!CL:0000127;9.43e-11;7!CL:0000081;2.32e-07;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0002569,2.19e-12,6;CL:0000128,8.99e-11,7;CL:0000126,8.99e-11,7;CL:0000127,8.99e-11,7;CL:0002453,8.99e-11,7;CL:0000081,2.32e-07,11 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.55e-07;10 | |ontology_enrichment_development_v019=UBERON:0006238;2.55e-07;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3307;5.96e-34;2!DOID:3093;8.14e-07;11 | |ontology_enrichment_disease_v019=DOID:3307;5.96e-34;2!DOID:3093;8.14e-07;11 | ||
|ontology_enrichment_disease_v019_2=DOID:3307,7.05e-34,2;DOID:3093,7.92e-07,11 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003422;2.19e-12;6!UBERON:0003104;8.16e-11;7!UBERON:0009142;8.16e-11;7!UBERON:0002331;5.73e-08;10 | |ontology_enrichment_uberon_v019=UBERON:0003422;2.19e-12;6!UBERON:0003104;8.16e-11;7!UBERON:0009142;8.16e-11;7!UBERON:0002331;5.73e-08;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003422,2.19e-12,6;UBERON:0002331,5.73e-08,10;UBERON:0000358,5.73e-08,10;UBERON:0000307,5.73e-08,10;UBERON:0000091,5.73e-08,10;UBERON:0000087,5.73e-08,10;UBERON:0007010,5.73e-08,10;UBERON:0007806,5.73e-08,10;UBERON:0008780,5.73e-08,10;UBERON:0005728,5.73e-08,10 | |||
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| ||
|short_description=p20@ARSJ | |short_description=p20@ARSJ | ||
}} | }} |
Latest revision as of 19:53, 24 September 2015
Short description: | p20@ARSJ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_ARSJ_5end |
Coexpression cluster: | NA |
Association with transcript: | -245bp_to_ENST00000503013_5end |
EntrezGene: | ARSJ |
HGNC: | 26286 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of umbilical cord | 2.19e-12 | 6 |
oligodendrocyte | 8.99e-11 | 7 |
macroglial cell | 8.99e-11 | 7 |
astrocyte | 8.99e-11 | 7 |
oligodendrocyte precursor cell | 8.99e-11 | 7 |
blood cell | 2.32e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
mesenchyme of umbilical cord | 2.19e-12 | 6 |
umbilical cord | 5.73e-08 | 10 |
blastocyst | 5.73e-08 | 10 |
blastula | 5.73e-08 | 10 |
bilaminar disc | 5.73e-08 | 10 |
inner cell mass | 5.73e-08 | 10 |
cleaving embryo | 5.73e-08 | 10 |
connecting stalk | 5.73e-08 | 10 |
inner cell mass derived epiblast | 5.73e-08 | 10 |
extraembryonic mesoderm | 5.73e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
teratoma | 7.05e-34 | 2 |
nervous system cancer | 7.92e-07 | 11 |