FFCP PHASE1:Hg19::chr16:15818196..15818208,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:15818196..15818208,-
|short_description=p20@MYH11
|description=CAGE_peak_20_at_MYH11_5end
|association_with_transcript=-11bp_to_CR749516_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4629 | |EntrezGene=4629 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7569 | |HGNC=7569 | ||
|TSSclassifier=strong | |||
|UniProt=Q68D89 | |UniProt=Q68D89 | ||
|association_with_transcript=-11bp_to_CR749516_5end | |||
|cluster_id=chr16:15818196..15818208,- | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_20_at_MYH11_5end | |||
|id=chr16:15818196..15818208,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004874;6.44e-16;1!UBERON:0005754;8.63e-16;1!UBERON:0000358;1.54e-15;1!UBERON:0009143;1.54e-15;1!UBERON:0006242;2.75e-15;1!UBERON:0007297;1.50e-08;2!UBERON:0006965;1.67e-08;2!UBERON:0006603;2.13e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.50e-43!115;UBERON:0006947!3.79e-13!3;UBERON:0004054!3.79e-13!3;UBERON:0003135!7.14e-13!11;UBERON:0005904!5.75e-10!4;UBERON:0003101!3.44e-08!22;UBERON:0000079!3.44e-08!22;UBERON:0003133!7.16e-08!48;UBERON:0001155!2.64e-07!9;UBERON:0005156!2.89e-07!59;UBERON:0000990!2.89e-07!59;UBERON:0004175!5.55e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;7.16e-20;3!UBERON:0004054;7.16e-20;3!UBERON:0000989;6.44e-16;1!UBERON:0008811;6.44e-16;1!UBERON:0000998;8.63e-16;1!UBERON:0006868;8.63e-16;1!UBERON:0002146;1.07e-15;1!UBERON:0005623;1.07e-15;1!UBERON:0001000;2.75e-15;1!UBERON:0005352;2.75e-15;1!UBERON:0005904;3.67e-15;4!UBERON:0003135;2.49e-12;11!UBERON:0003101;1.23e-10;22!UBERON:0000079;1.23e-10;22!UBERON:0001255;1.39e-08;2!UBERON:0001556;1.39e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,7.16e-20,3;UBERON:0004054,7.16e-20,3;UBERON:0000989,6.44e-16,1;UBERON:0008811,6.44e-16,1;UBERON:0006258,6.44e-16,1;UBERON:0005876,6.44e-16,1;UBERON:0004874,6.44e-16,1;UBERON:0000998,8.63e-16,1;UBERON:0006868,8.63e-16,1;UBERON:0002146,9.99e-16,1;UBERON:0005623,9.99e-16,1;UBERON:0001000,2.75e-15,1;UBERON:0005352,2.75e-15,1;UBERON:0005904,3.67e-15,4;UBERON:0003135,2.49e-12,11;UBERON:0007023,1.75e-11,114;UBERON:0003101,1.26e-10,22;UBERON:0000079,1.26e-10,22;UBERON:0001255,1.39e-08,2;UBERON:0001556,1.39e-08,2;UBERON:0003064,1.77e-08,28 | |||
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| ||
|short_description=p20@MYH11 | |||
}} | }} |
Latest revision as of 19:53, 24 September 2015
Short description: | p20@MYH11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_MYH11_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | -11bp_to_CR749516_5end |
EntrezGene: | MYH11 |
HGNC: | 7569 |
UniProt: | Q68D89 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 7.16e-20 | 3 |
internal male genitalia | 7.16e-20 | 3 |
penis | 6.44e-16 | 1 |
intromittent organ | 6.44e-16 | 1 |
lateral plate mesenchyme | 6.44e-16 | 1 |
undifferentiated genital tubercle | 6.44e-16 | 1 |
somatopleure | 6.44e-16 | 1 |
seminal vesicle | 8.63e-16 | 1 |
seminal fluid secreting gland | 8.63e-16 | 1 |
pulmonary valve | 9.99e-16 | 1 |
semi-lunar valve | 9.99e-16 | 1 |
vas deferens | 2.75e-15 | 1 |
spermatic cord | 2.75e-15 | 1 |
duct of male reproductive system | 3.67e-15 | 4 |
male reproductive organ | 2.49e-12 | 11 |
adult organism | 1.75e-11 | 114 |
male organism | 1.26e-10 | 22 |
male reproductive system | 1.26e-10 | 22 |
urinary bladder | 1.39e-08 | 2 |
lower urinary tract | 1.39e-08 | 2 |
intermediate mesoderm | 1.77e-08 | 28 |