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FFCP PHASE1:Hg19::chr9:123812542..123812560,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=727
|EntrezGene=727
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=1331
|HGNC=1331
|TSSclassifier=strong
|UniProt=P01031,Q59GS8
|UniProt=P01031,Q59GS8
|association_with_transcript=0bp_to_ENST00000223642,NM_001735,uc004bkv.2,uc010mvm.1,uc010mvn.1_5end
|association_with_transcript=0bp_to_ENST00000223642,NM_001735,uc004bkv.2,uc010mvm.1,uc010mvn.1_5end
|cluster_id=chr9:123812542..123812560,-
|coexpression_cluster_id=C5
|coexpression_cluster_id=C5
|description=CAGE_peak_1_at_C5_5end
|description=CAGE_peak_1_at_C5_5end
|id=chr9:123812542..123812560,-
|id=chr9:123812542..123812560,-
|ontology_enrichment_celltype=CL:0000181!1.41e-18!12;CL:0000417!1.41e-18!12;CL:0000668!1.41e-18!12;CL:0000414!1.41e-18!12;CL:0000412!1.41e-18!12;CL:0000182!1.41e-18!12;CL:0000223!2.44e-07!59
|ontology_enrichment_celltype=CL:0000181!1.41e-18!12;CL:0000417!1.41e-18!12;CL:0000668!1.41e-18!12;CL:0000414!1.41e-18!12;CL:0000412!1.41e-18!12;CL:0000182!1.41e-18!12;CL:0000223!2.44e-07!59
|ontology_enrichment_celltype_v019=CL:0000182;1.09e-28;12
|ontology_enrichment_celltype_v019_2=CL:0000182,1.09e-28,12;CL:0000223,3.82e-13,58
|ontology_enrichment_development_v019=UBERON:0009497;4.76e-26;13!UBERON:0004161;5.55e-24;11!UBERON:0001041;8.24e-24;30!UBERON:0003104;1.19e-12;31!CL:0000223;8.83e-09;58!UBERON:0006595;1.11e-07;86
|ontology_enrichment_disease=DOID:114!2.08e-07!2
|ontology_enrichment_disease=DOID:114!2.08e-07!2
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon=UBERON:0008835!2.54e-21!22;UBERON:0003894!2.54e-21!22;UBERON:0002107!4.00e-21!19;UBERON:0006925!4.00e-21!19;UBERON:0008836!4.00e-21!19;UBERON:0005057!2.15e-20!26;UBERON:0009854!2.88e-20!23;UBERON:0007499!2.06e-18!25;UBERON:0009497!2.06e-18!25;UBERON:0000015!2.06e-18!25;UBERON:0002423!2.06e-18!25;UBERON:0006235!2.06e-18!25;UBERON:0004161!2.06e-18!25;UBERON:0009856!1.36e-17!26;UBERON:0003929!1.51e-16!54;UBERON:0004921!1.79e-16!129;UBERON:0004185!1.79e-16!129;UBERON:0005911!4.51e-15!82;UBERON:0002368!3.43e-14!35;UBERON:0001007!1.72e-13!155;UBERON:0001555!1.72e-13!155;UBERON:0007026!1.72e-13!155;UBERON:0000949!3.60e-12!45;UBERON:0002365!5.85e-12!31;UBERON:0002330!5.85e-12!31;UBERON:0004119!9.46e-12!169;UBERON:0000925!9.46e-12!169;UBERON:0006595!9.46e-12!169;UBERON:0001041!1.02e-11!98;UBERON:0005172!6.12e-11!55;UBERON:0005173!6.12e-11!55;UBERON:0000077!2.22e-10!130;UBERON:0002530!8.17e-10!59;UBERON:0002417!1.63e-09!61;UBERON:0000916!1.63e-09!61;UBERON:0005177!3.47e-09!107;UBERON:0000466!6.37e-08!126;UBERON:0005409!1.29e-07!35;UBERON:0009569!1.85e-07!113
|ontology_enrichment_uberon_v019=UBERON:0002107;3.54e-33;19!UBERON:0006925;3.54e-33;19!UBERON:0002423;2.39e-29;25!UBERON:0002365;3.94e-19;31!UBERON:0002330;3.94e-19;31!UBERON:0002368;8.46e-17;33!UBERON:0005409;2.56e-13;22!UBERON:0000949;1.84e-12;43!UBERON:0001007;2.63e-11;81!UBERON:0005172;1.14e-10;52!UBERON:0005173;1.14e-10;52!UBERON:0002108;3.76e-10;4!UBERON:0000160;5.29e-10;17!UBERON:0004921;1.34e-07;33!UBERON:0002417;8.02e-07;58!UBERON:0000916;8.02e-07;58!UBERON:0002530;8.46e-07;57
|ontology_enrichment_uberon_v019_2=UBERON:0008835,1.11e-33,22;UBERON:0003894,1.11e-33,22;UBERON:0002107,3.65e-33,19;UBERON:0006925,3.65e-33,19;UBERON:0008836,3.65e-33,19;UBERON:0009854,4.13e-32,23;UBERON:0007499,2.42e-29,25;UBERON:0009497,2.42e-29,25;UBERON:0000015,2.42e-29,25;UBERON:0002423,2.42e-29,25;UBERON:0006235,2.42e-29,25;UBERON:0004161,2.42e-29,25;UBERON:0009856,4.06e-28,26;UBERON:0004921,6.58e-25,118;UBERON:0005911,9.96e-20,82;UBERON:0003929,1.56e-19,54;UBERON:0002365,1.78e-19,31;UBERON:0002330,1.78e-19,31;UBERON:0001007,2.92e-19,145;UBERON:0001555,2.92e-19,145;UBERON:0007026,2.92e-19,145;UBERON:0001041,3.61e-18,87;UBERON:0002368,5.34e-17,35;UBERON:0004119,6.08e-17,160;UBERON:0000925,6.08e-17,160;UBERON:0006595,6.08e-17,160;UBERON:0005172,1.13e-16,54;UBERON:0005173,1.13e-16,54;UBERON:0000949,3.16e-15,45;UBERON:0005177,4.58e-15,101;UBERON:0002417,1.04e-14,60;UBERON:0000916,1.04e-14,60;UBERON:0005409,1.18e-14,25;UBERON:0011216,1.33e-12,223;UBERON:0009569,1.23e-11,112;UBERON:0002530,4.75e-11,59;UBERON:0002108,3.71e-10,4;UBERON:0000160,5.38e-10,17;UBERON:0002100,2.40e-07,199
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|short_description=p1@C5
|short_description=p1@C5
}}
}}

Latest revision as of 20:24, 24 September 2015

Short description:p1@C5
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_1_at_C5_5end
Coexpression cluster:C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas
Association with transcript: 0bp_to_ENST00000223642, NM_001735, uc004bkv.2, uc010mvm.1, uc010mvn.1_5end
EntrezGene:C5
HGNC: 1331
UniProt: P01031Q59GS8
Genome view:ZENBU


View on UCSC genome browser

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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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