FFCP PHASE1:Hg19::chr16:15835741..15835755,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4629 | |EntrezGene=4629 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7569 | |HGNC=7569 | ||
|TSSclassifier=strong | |||
|UniProt=P35749,Q7Z7R0 | |UniProt=P35749,Q7Z7R0 | ||
|association_with_transcript=-228bp_to_D10667_5end | |||
|cluster_id=chr16:15835741..15835755,- | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_19_at_MYH11_5end | |||
|id=chr16:15835741..15835755,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004874;5.42e-15;1!UBERON:0009143;6.66e-15;1!UBERON:0005754;8.17e-15;1!UBERON:0006242;2.25e-14;1!UBERON:0007297;4.68e-08;2!UBERON:0006965;5.74e-08;2!UBERON:0006603;6.17e-08;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.16e-42!115;UBERON:0006947!3.01e-14!3;UBERON:0004054!3.01e-14!3;UBERON:0003135!8.05e-14!11;UBERON:0005904!8.53e-11!4;UBERON:0000059!1.17e-09!11;UBERON:0003101!7.03e-09!22;UBERON:0000079!7.03e-09!22;UBERON:0000160!1.56e-08!27;UBERON:0005409!4.64e-08!35;UBERON:0001155!7.66e-08!9;UBERON:0003133!3.31e-07!48;UBERON:0005156!8.84e-07!59;UBERON:0000990!8.84e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;5.79e-19;3!UBERON:0004054;5.79e-19;3!UBERON:0004175;1.04e-15;21!UBERON:0000989;5.42e-15;1!UBERON:0008811;5.42e-15;1!UBERON:0001000;6.66e-15;1!UBERON:0005352;6.66e-15;1!UBERON:0000998;8.17e-15;1!UBERON:0006868;8.17e-15;1!UBERON:0002146;1.23e-14;1!UBERON:0005623;1.23e-14;1!UBERON:0005904;1.78e-14;4!UBERON:0005795;2.25e-14;1!UBERON:0006834;2.25e-14;1!UBERON:0000996;2.25e-14;1!UBERON:0003135;1.08e-11;11!UBERON:0003101;4.45e-10;22!UBERON:0000079;4.45e-10;22!UBERON:0001255;5.01e-08;2!UBERON:0001556;5.01e-08;2!UBERON:0003133;1.74e-07;44!UBERON:0003975;4.24e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.45e-21,114;UBERON:0006947,6.06e-19,3;UBERON:0004054,6.06e-19,3;UBERON:0000989,5.42e-15,1;UBERON:0008811,5.42e-15,1;UBERON:0006258,5.42e-15,1;UBERON:0005876,5.42e-15,1;UBERON:0004874,5.42e-15,1;UBERON:0001000,7.13e-15,1;UBERON:0005352,7.13e-15,1;UBERON:0000998,8.17e-15,1;UBERON:0006868,8.17e-15,1;UBERON:0002146,1.07e-14,1;UBERON:0005623,1.07e-14,1;UBERON:0000996,1.61e-14,1;UBERON:0005904,1.85e-14,4;UBERON:0006834,2.41e-14,1;UBERON:0004175,3.39e-13,25;UBERON:0003064,6.23e-12,28;UBERON:0003135,1.10e-11,11;UBERON:0005156,1.73e-10,59;UBERON:0000990,1.73e-10,59;UBERON:0003101,4.50e-10,22;UBERON:0000079,4.50e-10,22;UBERON:0003133,1.15e-09,48;UBERON:0000162,3.85e-09,14;UBERON:0001353,3.85e-09,14;UBERON:0000163,3.85e-09,14;UBERON:0006866,3.85e-09,14;UBERON:0000164,3.85e-09,14;UBERON:0000931,3.85e-09,14;UBERON:0004122,1.44e-08,15;UBERON:0001255,5.02e-08,2;UBERON:0001556,5.02e-08,2;UBERON:0001046,7.19e-07,19 | |||
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| ||
|short_description=p19@MYH11 | |||
}} | }} |
Latest revision as of 20:26, 24 September 2015
Short description: | p19@MYH11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_MYH11_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | -228bp_to_D10667_5end |
EntrezGene: | MYH11 |
HGNC: | 7569 |
UniProt: | P35749Q7Z7R0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.45e-21 | 114 |
male genital duct | 6.06e-19 | 3 |
internal male genitalia | 6.06e-19 | 3 |
penis | 5.42e-15 | 1 |
intromittent organ | 5.42e-15 | 1 |
lateral plate mesenchyme | 5.42e-15 | 1 |
undifferentiated genital tubercle | 5.42e-15 | 1 |
somatopleure | 5.42e-15 | 1 |
vas deferens | 7.13e-15 | 1 |
spermatic cord | 7.13e-15 | 1 |
seminal vesicle | 8.17e-15 | 1 |
seminal fluid secreting gland | 8.17e-15 | 1 |
pulmonary valve | 1.07e-14 | 1 |
semi-lunar valve | 1.07e-14 | 1 |
vagina | 1.61e-14 | 1 |
duct of male reproductive system | 1.85e-14 | 4 |
uterus or analog | 2.41e-14 | 1 |
internal genitalia | 3.39e-13 | 25 |
intermediate mesoderm | 6.23e-12 | 28 |
male reproductive organ | 1.10e-11 | 11 |
reproductive structure | 1.73e-10 | 59 |
reproductive system | 1.73e-10 | 59 |
male organism | 4.50e-10 | 22 |
male reproductive system | 4.50e-10 | 22 |
reproductive organ | 1.15e-09 | 48 |
cloaca | 3.85e-09 | 14 |
anal region | 3.85e-09 | 14 |
embryonic cloaca | 3.85e-09 | 14 |
terminal part of digestive tract | 3.85e-09 | 14 |
primitive urogenital sinus | 3.85e-09 | 14 |
proctodeum | 3.85e-09 | 14 |
genitourinary system | 1.44e-08 | 15 |
urinary bladder | 5.02e-08 | 2 |
lower urinary tract | 5.02e-08 | 2 |
hindgut | 7.19e-07 | 19 |