FFCP PHASE1:Hg19::chr17:42345487..42345514,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6521 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11027 | |||
|TSSclassifier=strong | |||
|UniProt=P02730 | |||
|association_with_transcript=0bp_to_ENST00000262418,ENST00000497360,ENST00000498270,NM_000342,uc002igf.3,uc002igg.3_5end | |||
|cluster_id=chr17:42345487..42345514,- | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_1_at_SLC4A1_5end | |||
|id=chr17:42345487..42345514,- | |||
|ontology_enrichment_celltype=CL:0002057!4.47e-13!42;CL:0000860!1.08e-11!45;CL:0000763!3.10e-10!112;CL:0000049!3.10e-10!112;CL:0000766!1.23e-07!76;CL:0000839!5.25e-07!70;CL:0002194!8.89e-07!63;CL:0000576!8.89e-07!63;CL:0000040!8.89e-07!63;CL:0000559!8.89e-07!63 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004872;2.83e-11;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1036;1.53e-09;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.46e-09,8 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.98e-51!115;UBERON:0001049!2.08e-15!57;UBERON:0005068!2.08e-15!57;UBERON:0006241!2.08e-15!57;UBERON:0007135!2.08e-15!57;UBERON:0003080!3.52e-14!42;UBERON:0002780!1.81e-13!41;UBERON:0001890!1.81e-13!41;UBERON:0006240!1.81e-13!41;UBERON:0000178!7.12e-13!15;UBERON:0000179!7.12e-13!15;UBERON:0000463!7.12e-13!15;UBERON:0002616!3.13e-12!59;UBERON:0003075!8.42e-12!86;UBERON:0007284!8.42e-12!86;UBERON:0002390!1.55e-11!102;UBERON:0003061!1.55e-11!102;UBERON:0002346!8.56e-11!90;UBERON:0002193!1.04e-10!112;UBERON:0001893!5.46e-10!34;UBERON:0001017!6.64e-10!82;UBERON:0005743!9.21e-10!86;UBERON:0000955!1.03e-09!69;UBERON:0006238!1.03e-09!69;UBERON:0002791!1.76e-09!33;UBERON:0002020!4.66e-09!34;UBERON:0003528!4.66e-09!34;UBERON:0001869!1.20e-08!32;UBERON:0000073!1.26e-08!94;UBERON:0001016!1.26e-08!94;UBERON:0003056!2.64e-08!61;UBERON:0002619!6.38e-07!22;UBERON:0001950!7.50e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.89e-21;15!UBERON:0000179;7.89e-21;15!UBERON:0000463;7.89e-21;15!UBERON:0000922;1.11e-13;49!UBERON:0002390;1.68e-12;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.10e-20,15;UBERON:0000179,1.10e-20,15;UBERON:0000463,1.10e-20,15;UBERON:0007023,1.99e-16,114;UBERON:0002390,4.78e-08,98;UBERON:0003061,4.78e-08,98;UBERON:0002193,9.49e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14691421479123,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.872389432677388,1.13362783106643,0.727752183563449,1.85943229524548,1.23350366406548,0.619412741790207,2.01384674625505,0.256160706529101,0.236482229888585,2.06847408441971,0.645484683583826,0,0.564727018627814,0,0.224723484445085,2.14258724659632,0.320929027076094,1.27867425159808,0.989553900560148,0.398927315243264,0,1.16083695451434,1.13477044938228,0.622822248995575,4.01997864410789,0.521482918420201,0.65156653411535,1.21079900526674,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0.764546456250458,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,1.96565443335525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,11.966458368161,7.0450637284126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,2.5885704098234,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3728.95272211741,3487.8103521232,0,0,0,5.66725564062472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.17790904272285,0,0,0,0,761.171413848254,977.970987935098,878.395962622559,274.204773551915,269.853651144543,555.741627692159,703.660962721264,1050.89085858991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,65.2363214422875,1.89318974933188,0,1.4098700508785,0,1.02555725490326,0,0,0,0.23874448473769,0,0,0.994147647766298,0,0,0,0,2.59022384726391,0,0,0,0,0,0,0,0,3.64980600856654,917.220243688779,0,0,0.556608588971108,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0,0,0.110579259931225,0,1.53569778007781,0,0,0.0769502585037971,0,0,0,0,0.638002319463839,0,0.533034776018635,0,0,1.32969345520125,1.35357396370308,3.33306308340157,2.3495022176618,26.5655225813859,36.2375400075263,0,0,0,0,0,0,5.49927130440263,0,0,0,0.741412462787447,15.248975298677,0.234264445725339,0,0,0,0,0,18.6704384594599,2.27471686662557,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.581934098930517,0,4.06765333404958,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,3.0721064139948,0.687481272035051,14.3574604915363,0.199679000498991,0,2.90122894674434,48.3049167179562,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.425246896606173,0,0,23.0275641912642,0,0,0,0,2.64836788146173,0,0,0,0,0,3.69416343372025,0,0,1.17241786942466,795.041333473328,0.775697738169303,0,0,0,16.1248992977219,143.213121945796,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0.366078794705889,0.1251909307065,1.72022758707021,0,0.807253238237985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,1.26035848110859,0.0691572524642179,0.322951291263702,1.42769420259154,0,0,0,0,0,0,0,2.40673050717623,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,1.09394961803644,0,0.496211178389294,0,0,1.60710550763486,0,1.21393120847326,0.227662191351298,27.6751394907433,0,0,0.203909198930495,0.263091094251396,0,0,0.706437835654626,0.628462359664008,0,6.39211104356647,0,0,1.28657779517981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,1.33461648913121,64.9496081549392,15.5427517778925,0,0,0,0,0,0,0,2.40415516554353,0,0,0,1.57046773691956,0,12.2570160999186,0,2.91350145737546,357.934651917274,0,0,0,0,8.03370027071169,0,0.860037498908708,0,0.0679914901909147,12.6541700198709,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0,0.829169439458779,0.103432995861895,62.6907906788884,28.0916029127214,0.710478008196067,15.1462302881893,0,1.97306190662311,4.04234377916439,0.217716747896961,4.79126621519393,0.404112318087525,1.93649954560226,26.9454888802271,0,0,0,0,11.7320471201727,0.244482888365733,12.6137815277879,11.9836219353392,1.00636896795513,0 | |||
|short_description=p1@SLC4A1 | |||
}} |
Latest revision as of 20:39, 24 September 2015
Short description: | p1@SLC4A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC4A1_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 0bp_to_ENST00000262418, ENST00000497360, ENST00000498270, NM_000342, uc002igf.3, uc002igg.3_5end |
EntrezGene: | SLC4A1 |
HGNC: | 11027 |
UniProt: | P02730 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 1.10e-20 | 15 |
haemolymphatic fluid | 1.10e-20 | 15 |
organism substance | 1.10e-20 | 15 |
adult organism | 1.99e-16 | 114 |
hematopoietic system | 4.78e-08 | 98 |
blood island | 4.78e-08 | 98 |
hemolymphoid system | 9.49e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.46e-09 | 8 |