FFCP PHASE1:Hg19::chr14:60952739..60952787,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=317761 | |EntrezGene=317761 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19849 | |HGNC=19849 | ||
|TSSclassifier=strong | |||
|UniProt=G3V493,Q08AQ4 | |UniProt=G3V493,Q08AQ4 | ||
|association_with_transcript=0bp_to_ENST00000555476,NM_174978,uc001xez.3,uc010apo.2_5end | |association_with_transcript=0bp_to_ENST00000555476,NM_174978,uc001xez.3,uc010apo.2_5end | ||
|cluster_id=chr14:60952739..60952787,- | |||
|description=CAGE_peak_1_at_C14orf39_5end | |description=CAGE_peak_1_at_C14orf39_5end | ||
|id=chr14:60952739..60952787,- | |id=chr14:60952739..60952787,- | ||
|ontology_enrichment_celltype=CL:0000075!1.08e-08!27;CL:0000188!1.75e-07!9;CL:0000710!6.37e-07!20 | |ontology_enrichment_celltype=CL:0000075!1.08e-08!27;CL:0000188!1.75e-07!9;CL:0000710!6.37e-07!20 | ||
|ontology_enrichment_celltype_v019=CL:0002321;1.87e-18;15!CL:0000075;1.43e-13;27!CL:0002322;4.23e-12;5!CL:0000306;1.61e-11;4!CL:0002222;1.61e-11;4!CL:0002224;1.61e-11;4!CL:0000064;1.64e-09;3!CL:0000067;1.64e-09;3!CL:0005012;1.64e-09;3!CL:0002304;1.64e-09;3!CL:0000333;2.51e-09;5!CL:0000188;3.36e-09;9!CL:0000710;7.36e-09;20!CL:0000680;1.49e-08;7!CL:0000594;5.02e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000075,1.36e-13,27;CL:0002322,3.90e-12,5;CL:0000306,1.52e-11,4;CL:0002222,1.52e-11,4;CL:0002224,1.52e-11,4;CL:0000064,1.65e-09,3;CL:0000067,1.65e-09,3;CL:0005012,1.65e-09,3;CL:0002304,1.65e-09,3;CL:0000188,5.06e-09,9;CL:0000710,7.23e-09,20;CL:0000133,2.60e-08,59;CL:0000594,7.60e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!1.52e-09!22;DOID:2994!1.52e-09!22 | |ontology_enrichment_disease=DOID:3095!1.52e-09!22;DOID:2994!1.52e-09!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.93e-10;22!DOID:2994;1.93e-10;22!DOID:171;1.10e-09;10!DOID:169;9.32e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.77e-10,22;DOID:2994,1.77e-10,22;DOID:171,1.22e-09,10;DOID:169,1.02e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0007625!5.17e-13!11;UBERON:0001444!1.43e-11!48;UBERON:0000970!6.55e-11!20;UBERON:0000019!3.69e-10!19;UBERON:0000047!3.69e-10!19;UBERON:0004088!3.69e-10!19;UBERON:0003072!3.69e-10!19;UBERON:0003071!3.69e-10!19;UBERON:0004128!3.69e-10!19;UBERON:0002104!3.76e-10!21;UBERON:0000020!4.29e-10!23;UBERON:0001456!5.03e-10!21;UBERON:0001032!1.86e-09!24;UBERON:0004456!1.86e-09!24;UBERON:0003101!2.59e-07!22;UBERON:0000079!2.59e-07!22 | |ontology_enrichment_uberon=UBERON:0007625!5.17e-13!11;UBERON:0001444!1.43e-11!48;UBERON:0000970!6.55e-11!20;UBERON:0000019!3.69e-10!19;UBERON:0000047!3.69e-10!19;UBERON:0004088!3.69e-10!19;UBERON:0003072!3.69e-10!19;UBERON:0003071!3.69e-10!19;UBERON:0004128!3.69e-10!19;UBERON:0002104!3.76e-10!21;UBERON:0000020!4.29e-10!23;UBERON:0001456!5.03e-10!21;UBERON:0001032!1.86e-09!24;UBERON:0004456!1.86e-09!24;UBERON:0003101!2.59e-07!22;UBERON:0000079!2.59e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0007625;3.40e-23;11!UBERON:0000019;2.97e-15;19!UBERON:0000047;2.97e-15;19!UBERON:0004088;2.97e-15;19!UBERON:0010230;2.97e-15;19!UBERON:0000970;2.32e-14;20!UBERON:0002104;1.49e-13;21!UBERON:0001456;1.49e-13;21!UBERON:0000020;3.77e-12;23!UBERON:0000488;6.34e-12;4!UBERON:0001801;1.01e-11;14!UBERON:0001032;1.54e-11;24!UBERON:0004456;1.54e-11;24!UBERON:0010077;1.61e-11;4!UBERON:0005389;1.61e-11;4!UBERON:0000484;1.61e-11;4!UBERON:0000965;1.61e-11;4!UBERON:0001803;1.61e-11;4!UBERON:0000010;9.03e-11;8!UBERON:0001134;1.23e-10;16!UBERON:0002036;1.23e-10;16!UBERON:0001778;1.64e-09;3!UBERON:0001775;1.64e-09;3!UBERON:0000013;2.51e-09;5!UBERON:0002410;2.51e-09;5!UBERON:0002203;6.45e-08;6!UBERON:0001768;6.45e-08;6!UBERON:0002200;6.45e-08;6!UBERON:0000007;5.95e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,4.01e-23,11;UBERON:0000019,2.52e-14,20;UBERON:0000047,2.52e-14,20;UBERON:0010312,2.52e-14,20;UBERON:0004088,2.52e-14,20;UBERON:0010230,2.52e-14,20;UBERON:0003072,2.52e-14,20;UBERON:0004128,2.52e-14,20;UBERON:0003071,2.52e-14,20;UBERON:0000970,1.61e-13,21;UBERON:0002104,1.61e-13,21;UBERON:0001456,8.69e-13,22;UBERON:0000488,6.03e-12,4;UBERON:0001801,9.48e-12,14;UBERON:0010077,1.52e-11,4;UBERON:0005389,1.52e-11,4;UBERON:0000484,1.52e-11,4;UBERON:0002546,1.52e-11,4;UBERON:0000965,1.52e-11,4;UBERON:0001803,1.52e-11,4;UBERON:0003073,1.52e-11,4;UBERON:0005426,1.52e-11,4;UBERON:0000020,1.65e-11,24;UBERON:0001032,1.65e-11,24;UBERON:0004456,1.65e-11,24;UBERON:0000010,9.89e-11,8;UBERON:0001778,1.65e-09,3;UBERON:0001775,1.65e-09,3;UBERON:0000013,2.80e-09,5;UBERON:0002410,2.80e-09,5;UBERON:0005085,2.37e-08,31;UBERON:0002203,6.24e-08,6;UBERON:0001768,6.24e-08,6;UBERON:0002200,6.24e-08,6;UBERON:0001444,2.21e-07,49;UBERON:0000007,6.68e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.662794751455832,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.90361775633475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,8.88627281342238,4.21285855178871,7.46595678391571,1.89919659471683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0.737005903870608,0.309977343527296,1.18800285728205,0.741800787835671,0,0,0.168336113954066,0.250237039743928,0,1.31693286264251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,1.46368447355514,1.19276791489337,1.74290914304278,2.59152637538426,1.00928340350251,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,3.77449182656756,0,0,0,0.370353780634118,0.325808305310325,0,2.88662684050547,9.04257158805599,3.05262605013136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,1.02738161275192,1.43248770591916,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0,0.271265023699736,1.24782516918484,0.535286966391485,0.315404830067869,0.234282829985426,0.601892199455438,0,0,0.664225598535437,0.184369168541703,0.260650843404249,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0,0,0,0,0.40101294060657,0.460404944679482,0.114814448164607,2.00300284807389,0.917870904715969,0.451199612907412,0.231046011313244,0,0,0.633309773357254,0,0,0,0,0,0.501689773854853,0,0,0,0,0,1.02580050046556,0.328014645699706,1.30151357865721,0,8.69909915774262,10.3961969899941,0,0,0,1.64340221096607,1.07834031980251,1.07452572308291,0.551346289938122,2.25582514223375,1.0151168573996,1.27839941124151,0.979352392114111,1.81813406897076,3.45942121257191,6.50824833722379,1.11273558941105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.719489830333259,0.274537029736055,0.589062011728432,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0.578775534266688,0.655894752046633,0,0.30982349809975,0,0.430234056612155,0,0,0,0.211107635297664,0.329294892959902,0,0,0.48111056362756,0.670302275535787,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,7.69983884210687,0,0,0,0,6.53647718188172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51592382018778,0,2.81974010175699,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,6.3337622438398,0,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,5.24888304089858,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0.108647371922008,0,0,0,3.06579894587209,0.156980256395025,2.49317522850235,1.35357396370308,1.17637520590644,1.34257269580674,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83241080922615,1.80388103297391,0.414752765588989,0,0,0,0,0,0,0.173559738335131,0,0,0,2.92376255201748,0,0,0,0.290967049465258,0,0.677942222341597,0,0.19871461170299,0.0633107959558787,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,1.12527203925513,0.412618309791701,0.83088067605837,0,0,0,0,0,0,0,0.537862017998534,0,0,0,0.25426853765475,0,0,0,3.59190574687462,0.246277562248017,0,3.85261111168427,0,0,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0,4.38453354171225,0,0,0.5013797880454,0.306345576763462,0.327872630709804,0.471162288750703,0,0,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0.754703705257725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,1.39879507719444,1.24415452006595,2.04630994085843,8.84163453452791,2.35898912783845,17.6919613871063,0.169732529954025,5.10179808244039,4.33775174906508,0,0,0,0,0.352675943690684,0,0.0642292250964595,0,0.159633859057151,0,0,0,0.322951291263702,0,0,0,0,0,0,0,8.55339755099981,0.601682626794058,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,1.48863353516788,0,0,0,0,6.06965604236632,8.42350107999801,0,0,0,0.0679697329768317,0,0,2.11339663594931,0.078493092850514,0,0,0.913158720509496,0,0,0.857718530119876,5.68849002237816,0,0,0,0.828864656652147,0.17071847709395,0,2.15113679410139,3.19496401972526,4.4310970474762,0,0,0,0,0,0,0,0,1.12929087541872,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0.196308467114945,0.297046400327086,0,1.0195626881269,0,0,0,0,0,0,0,0.458729283404541,0,0.473314686579554,0.0679914901909147,0,0,0,0,0.432626562123789,0.126166424835079,1.42045243552804,2.4072715192173,0.203977659483963,0.534434810531121,0.275684698604535,2.75778293221613,6.44118934855035,7.502995644373,0,0,0.426467963801962,0.23806443146374,0,0.186224142887574,0,0.0636471582781649,0.202117188958219,0.435433495793923,0,0,0.0717222053926763,0,0,4.1623664892309,3.8614456457388,0,2.34640942403454,0,1.22068853494722,0,0,0 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| ||
|short_description=p1@C14orf39 | |short_description=p1@C14orf39 | ||
}} | }} |
Latest revision as of 20:45, 24 September 2015
Short description: | p1@C14orf39 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C14orf39_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000555476, NM_174978, uc001xez.3, uc010apo.2_5end |
EntrezGene: | C14orf39 |
HGNC: | 19849 |
UniProt: | G3V493Q08AQ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
columnar/cuboidal epithelial cell | 1.36e-13 | 27 |
embryonic stem cell | 3.90e-12 | 5 |
crystallin accumulating cell | 1.52e-11 | 4 |
vertebrate lens cell | 1.52e-11 | 4 |
lens epithelial cell | 1.52e-11 | 4 |
ciliated cell | 1.65e-09 | 3 |
ciliated epithelial cell | 1.65e-09 | 3 |
multi-ciliated epithelial cell | 1.65e-09 | 3 |
non-pigmented ciliary epithelial cell | 1.65e-09 | 3 |
cell of skeletal muscle | 5.06e-09 | 9 |
neurecto-epithelial cell | 7.23e-09 | 20 |
neurectodermal cell | 2.60e-08 | 59 |
skeletal muscle satellite cell | 7.60e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 4.01e-23 | 11 |
camera-type eye | 2.52e-14 | 20 |
simple eye | 2.52e-14 | 20 |
immature eye | 2.52e-14 | 20 |
ocular region | 2.52e-14 | 20 |
eyeball of camera-type eye | 2.52e-14 | 20 |
optic cup | 2.52e-14 | 20 |
optic vesicle | 2.52e-14 | 20 |
eye primordium | 2.52e-14 | 20 |
eye | 1.61e-13 | 21 |
visual system | 1.61e-13 | 21 |
face | 8.69e-13 | 22 |
atypical epithelium | 6.03e-12 | 4 |
anterior segment of eyeball | 9.48e-12 | 14 |
cuboidal epithelium | 1.52e-11 | 4 |
transparent eye structure | 1.52e-11 | 4 |
simple cuboidal epithelium | 1.52e-11 | 4 |
cranial placode | 1.52e-11 | 4 |
lens of camera-type eye | 1.52e-11 | 4 |
epithelium of lens | 1.52e-11 | 4 |
lens placode | 1.52e-11 | 4 |
lens vesicle | 1.52e-11 | 4 |
sense organ | 1.65e-11 | 24 |
sensory system | 1.65e-11 | 24 |
entire sense organ system | 1.65e-11 | 24 |
peripheral nervous system | 9.89e-11 | 8 |
ciliary epithelium | 1.65e-09 | 3 |
ciliary body | 1.65e-09 | 3 |
sympathetic nervous system | 2.80e-09 | 5 |
autonomic nervous system | 2.80e-09 | 5 |
ectodermal placode | 2.37e-08 | 31 |
vasculature of eye | 6.24e-08 | 6 |
uvea | 6.24e-08 | 6 |
vasculature of head | 6.24e-08 | 6 |
subdivision of head | 2.21e-07 | 49 |
pituitary gland | 6.68e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.77e-10 | 22 |
germ cell cancer | 1.77e-10 | 22 |
neuroectodermal tumor | 1.22e-09 | 10 |
neuroendocrine tumor | 1.02e-07 | 6 |