FFCP PHASE1:Hg19::chr17:42426344..42426350,+: Difference between revisions
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|id=chr17:42426344..42426350,+
|short_description=p29@GRN
|description=CAGE_peak_29_at_GRN_5end
|association_with_transcript=-175bp_to_uc002igq.1_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2896 | |EntrezGene=2896 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4601 | |HGNC=4601 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-175bp_to_uc002igq.1_5end | |||
|cluster_id=chr17:42426344..42426350,+ | |||
|coexpression_cluster_id=C74 | |||
|description=CAGE_peak_29_at_GRN_5end | |||
|id=chr17:42426344..42426350,+ | |||
|ontology_enrichment_celltype=CL:0002336!9.43e-21!1;CL:0002261!9.43e-21!1;CL:0002170!9.43e-21!1;CL:0000945!1.35e-13!24;CL:0000826!1.35e-13!24;CL:0000575!2.73e-11!2;CL:0000838!1.16e-09!52;CL:0000542!1.76e-09!53;CL:0000051!1.76e-09!53;CL:0002623!5.18e-08!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.78e-29;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.81e-21;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.81e-21,10 | |||
|ontology_enrichment_uberon=UBERON:0002106!4.52e-08!3;UBERON:0004854!4.52e-08!3;UBERON:0009034!4.52e-08!3;UBERON:0002095!4.52e-08!3;UBERON:0004782!4.52e-08!3;UBERON:0003281!4.52e-08!3;UBERON:0009664!4.52e-08!3;UBERON:0002296!4.52e-08!3;UBERON:0005602!4.52e-08!3;UBERON:0001179!4.52e-08!3;UBERON:0006293!4.52e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.39e-66;3!UBERON:0004177;1.48e-40;5!UBERON:0005057;1.48e-40;5!UBERON:0002075;1.85e-12;18!UBERON:0000077;8.32e-09;27!UBERON:0002405;8.32e-09;27!UBERON:0002323;4.53e-08;45!UBERON:0002390;2.32e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.39e-66,3;UBERON:0004854,2.39e-66,3;UBERON:0009034,2.39e-66,3;UBERON:0002095,2.39e-66,3;UBERON:0004782,2.39e-66,3;UBERON:0003281,2.39e-66,3;UBERON:0009664,2.39e-66,3;UBERON:0002296,2.39e-66,3;UBERON:0005602,2.39e-66,3;UBERON:0001179,2.39e-66,3;UBERON:0006293,2.39e-66,3;UBERON:0004177,1.78e-29,7;UBERON:0005057,1.78e-29,7;UBERON:0000945,5.22e-26,8;UBERON:0010039,5.22e-26,8;UBERON:0004457,6.76e-18,12;UBERON:0000042,6.76e-18,12;UBERON:0003887,6.76e-18,12;UBERON:0002075,1.85e-12,18;UBERON:0005409,4.34e-09,25;UBERON:0000077,2.67e-08,29 | |||
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|short_description=p29@GRN | |||
}} | }} |
Latest revision as of 21:03, 24 September 2015
Short description: | p29@GRN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_GRN_5end |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | -175bp_to_uc002igq.1_5end |
EntrezGene: | GRN |
HGNC: | 4601 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spleen | 2.39e-66 | 3 |
gastrointestinal system mesentery | 2.39e-66 | 3 |
stomach region | 2.39e-66 | 3 |
mesentery | 2.39e-66 | 3 |
gastrointestinal system serosa | 2.39e-66 | 3 |
mesentery of stomach | 2.39e-66 | 3 |
gut mesentery | 2.39e-66 | 3 |
dorsal mesentery | 2.39e-66 | 3 |
dorsal mesogastrium | 2.39e-66 | 3 |
peritoneal cavity | 2.39e-66 | 3 |
spleen primordium | 2.39e-66 | 3 |
hemopoietic organ | 1.78e-29 | 7 |
immune organ | 1.78e-29 | 7 |
stomach | 5.22e-26 | 8 |
food storage organ | 5.22e-26 | 8 |
cavity lining | 6.76e-18 | 12 |
serous membrane | 6.76e-18 | 12 |
intraembryonic coelom | 6.76e-18 | 12 |
viscus | 1.85e-12 | 18 |
gastrointestinal system | 4.34e-09 | 25 |
mixed endoderm/mesoderm-derived structure | 2.67e-08 | 29 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.81e-21 | 10 |