FFCP PHASE1:Hg19::chr1:210407163..210407200,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:210407163..210407200,- to FFCP PHASE1:Hg19::chr1:210407163..210407200,-: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=574036 | |EntrezGene=574036 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=32019 | |HGNC=32019 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=265bp_to_NR_024337,uc001hhx.3_5end | |||
|cluster_id=chr1:210407163..210407200,- | |||
|description=CAGE_peak_2_at_C1orf133_5end | |||
|id=chr1:210407163..210407200,- | |||
|ontology_enrichment_celltype=CL:0000055!9.86e-13!180;CL:0000057!3.28e-09!75;CL:0000222!2.26e-07!119;CL:1000497!2.73e-07!18;CL:0002518!2.73e-07!18;CL:1000449!9.97e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:1000497;1.40e-09;17!CL:0002518;1.40e-09;17!CL:1000449;6.13e-09;15!CL:0002681;2.54e-07;12!CL:0002584;2.54e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,1.56e-09,17;CL:0002518,1.56e-09,17;CL:1000449,6.86e-09,15;CL:0000057,8.85e-08,76;CL:0002681,2.41e-07,12;CL:0002584,2.41e-07,12;CL:0002078,7.73e-07,45;CL:0000222,8.50e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!3.72e-19!347;UBERON:0000477!6.83e-18!286;UBERON:0000475!5.31e-17!365;UBERON:0000468!3.28e-14!659;UBERON:0000119!1.18e-13!312;UBERON:0000483!6.67e-13!309;UBERON:0004111!7.83e-12!241;UBERON:0000467!9.87e-12!625;UBERON:0000480!1.64e-11!626;UBERON:0003104!1.20e-10!238;UBERON:0009142!1.20e-10!238;UBERON:0000064!4.89e-10!219;UBERON:0003914!2.59e-09!118;UBERON:0005256!2.70e-09!143;UBERON:0002050!3.29e-09!605;UBERON:0005423!3.29e-09!605;UBERON:0000922!3.36e-09!612;UBERON:0000923!6.68e-09!604;UBERON:0005291!6.68e-09!604;UBERON:0006598!6.68e-09!604;UBERON:0002532!6.68e-09!604;UBERON:0004121!7.26e-09!169;UBERON:0002049!2.10e-08!79;UBERON:0007798!2.10e-08!79;UBERON:0000025!2.26e-08!194;UBERON:0000924!4.85e-08!173;UBERON:0006601!4.85e-08!173;UBERON:0002100!5.22e-08!216;UBERON:0000033!1.95e-07!123;UBERON:0004876!2.34e-07!20;UBERON:0000058!2.96e-07!26;UBERON:0001444!3.13e-07!48;UBERON:0003102!3.42e-07!95;UBERON:0003064!3.46e-07!37;UBERON:0006555!4.25e-07!17;UBERON:0005103!4.25e-07!17;UBERON:0000083!4.25e-07!17;UBERON:0009201!4.25e-07!17;UBERON:0004819!4.25e-07!17;UBERON:0006553!4.25e-07!17;UBERON:0003074!4.25e-07!17;UBERON:0003060!4.25e-07!17;UBERON:0000080!4.77e-07!18;UBERON:0002120!4.77e-07!18;UBERON:0004875!4.77e-07!18;UBERON:0005721!4.77e-07!18;UBERON:0005754!4.77e-07!18;UBERON:0007297!4.77e-07!18;UBERON:0003103!5.37e-07!69;UBERON:0000153!6.96e-07!129;UBERON:0007811!6.96e-07!129;UBERON:0004211!9.97e-07!16;UBERON:0001285!9.97e-07!16;UBERON:0007684!9.97e-07!16;UBERON:0003220!9.97e-07!16;UBERON:0004208!9.97e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;6.13e-09;15!UBERON:0004819;6.13e-09;15!UBERON:0001285;6.13e-09;15!UBERON:0007684;6.13e-09;15!UBERON:0000353;6.16e-08;15!UBERON:0000489;2.07e-07;29!UBERON:0001225;2.54e-07;12!UBERON:0008987;2.54e-07;12!UBERON:0002113;6.13e-07;24!UBERON:0011143;6.13e-07;24!UBERON:0006554;7.19e-07;30!UBERON:0001008;7.19e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,3.79e-10,117;UBERON:0006555,2.50e-09,16;UBERON:0004819,2.50e-09,16;UBERON:0002049,3.48e-09,78;UBERON:0007798,3.48e-09,78;UBERON:0004211,6.86e-09,15;UBERON:0009773,6.86e-09,15;UBERON:0001231,6.86e-09,15;UBERON:0001285,6.86e-09,15;UBERON:0007684,6.86e-09,15;UBERON:0004208,6.86e-09,15;UBERON:0003104,9.83e-09,160;UBERON:0009142,9.83e-09,160;UBERON:0000353,4.40e-08,15;UBERON:0000119,7.77e-08,309;UBERON:0003103,9.41e-08,68;UBERON:0000489,1.52e-07,31;UBERON:0004111,1.93e-07,240;UBERON:0001225,2.41e-07,12;UBERON:0008987,2.41e-07,12;UBERON:0002113,2.98e-07,26;UBERON:0003918,2.98e-07,26;UBERON:0011143,2.98e-07,26;UBERON:0005095,2.98e-07,26;UBERON:0007687,2.98e-07,26;UBERON:0000483,3.16e-07,306 | |||
|phase1_expression=1.81678379270557,1.92690471501885,0.281908808191942,9.00659685178174,2.23480547213644,2.61701557230111,2.53299878168311,0.631719873426831,0.783556884599516,1.47440361900905,2.79120467188971,1.96597234917155,1.58260186937072,3.96052329472149,4.63956326019082,1.34465029290355,2.41077811209591,3.65155045193687,4.39139518911456,7.01790031037691,10.2000345622127,7.8363680369522,2.28988789704845,3.69560947696787,6.90484517771415,0,0,0,0.393364276848904,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,3.19656404608826,0,0,0,10.3387173116643,5.35298357332899,5.19941494402373,5.32150553910154,3.86473057049755,1.83370705696798,4.00724817121796,1.11235332835329,0.324547393654683,0,0.26591592103773,0,0,0,4.77029777680092,4.30117297553062,6.59566953054429,5.08777147731609,0,1.6507082516404,1.8809546988313,3.87625138753993,5.33649394030065,10.3763389957048,0.805658634218294,0,0.24406205754817,3.30896772311282,4.86085168729056,6.07238152331742,5.16417557040191,1.57656072676651,6.13266549863533,2.84779697870439,3.84723662253855,0,0,1.74437620857014,2.48485975847659,14.3092478180975,0.132409180813219,2.0078563452417,3.54668382198357,2.80338800071154,1.06748995729705,10.1133694851036,2.17847724779836,1.61652806483626,2.28846664358842,2.27036141467397,2.88087962239999,1.40592859100278,0.312160076830321,0,0.448346041655403,0.469737994575059,0.809364721840658,1.12360645361799,1.22492502752936,11.7920944619297,0.826606249406124,2.37600571456411,2.22540236350701,2.73048408581408,0.718618141816238,10.7735112930602,4.00379263590285,1.10825646193673,8.77955241761676,11.0335606487647,2.10333282469236,3.17610112848059,1.25572744982203,7.47450860864986,4.02670612203168,1.20036438433761,9.48083268993638,1.54584324027377,3.35010341396862,0.506328996723799,1.46155507741798,0.252433774244115,6.35144300631865,0.646584227275248,0,1.81353776809752,4.91725717700414,0.966304265816484,0.818238361772504,0.573609190778008,0.243947412259191,0,0.116193942869518,0.10366105501537,0.252320850875628,0,1.56449532329816,3.21620469096443,6.90674606762403,0.464367928031979,0,6.50687400219141,6.23763353288976,4.57920956778616,5.5146986366197,4.57546832594053,4.74541238222193,2.42696354688296,4.12065076763227,3.46272441251751,2.95262181849859,1.40241773803446,8.231480226628,2.94017422771084,0,0,0,0,0.122988438543114,1.3725424823882,0.219500570817251,0,1.00528972411631,0.555530670951178,0.325808305310325,0,5.77325368101093,0.231860809950154,3.28744343860301,0,0,0.761016608938393,0,0,0,0,0,0,1.51183915378974,0.992425680696705,1.43293636324557,1.74380363108377,0.766765358330422,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0.822619941626588,0,0,8.40983132590205,1.30788020649984,5.35369486492935,17.8394967745733,0,1.690605505112,20.7431730936199,14.5610411675913,0.257207374262142,0,1.0656887160644,0.285955987316295,2.17048642156577,3.29296134712308,0,0,1.58390374586686,0,1.74306691720059,0.499864955910285,0,0,0,2.63587341040741,3.44585807502342,5.70547620162874,3.76431397335706,0.61642896765115,1.79060963239896,0,0,0,0,0,1.30139853857622,4.63973287666617,0.502548796003046,4.46557126157214,0,0,0,0.736148950314839,5.00170521059677,2.17012018959788,2.70362119990049,7.13715955188647,7.7274183366628,4.56851518471581,5.11608369537122,9.09630016223939,11.3820378421755,10.627609576567,7.74350507875153,11.8161715676593,1.76221041716467,3.0882908142977,0,0,0,0.909382714338778,0,0.604780586659361,0.992431231275107,0.153461973288062,1.40330047216537,0.128139149255701,6.65219423786715,1.12597744800525,1.48418066444991,2.92998418225046,6.92490728721196,1.88892458831761,1.55776328755086,1.51073491997947,0.241718899183244,0.601519410909855,0.828728900423067,0.803701137152247,2.36718518408732,1.04899531967539,3.60959690325929,2.6185214615501,6.27479815341484,10.2297457257282,2.21658420675039,3.4120015221269,3.40187410553031,4.10240240594065,10.7959076883203,17.8824648778943,14.0473136679359,2.29388645740534,3.3243040357149,6.71624264166535,0,0,1.28225062558195,1.96808787419823,1.62689197332152,0.515205058238611,0.54941678891006,1.15513299888823,0.574265537996172,0,1.6068392984416,2.41676795730305,0,0.15350367472613,1.92971201478343,0.966782203814463,1.59518363305651,1.02271952899321,6.23224249527162,0.826424576804891,0.576570202095319,0.382838137483752,1.4162089319777,0,0.31481234683064,0,0.308033580176089,1.59691809095107,0,1.66791797193528,1.43124886741991,3.72158369359667,9.17500331684305,0.571890581771475,2.04718233049067,0,0.636406495851874,0,4.67668389716618,1.09814811894422,2.94531005864216,2.22400729730648,1.58510321173008,0,0.48763373908959,0.243713489631284,0,5.59649636772742,0.141405431953713,0,0.551365343546124,0,0.438450885253763,0,0,3.24656603140326,4.64735247149625,10.7044328962252,3.15504974848913,2.652724107354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|phase1_expression=1.81678379270557,1.92690471501885,0.281908808191942,9.00659685178174,2.23480547213644,2.61701557230111,2.53299878168311,0.631719873426831,0.783556884599516,1.47440361900905,2.79120467188971,1.96597234917155,1.58260186937072,3.96052329472149,4.63956326019082,1.34465029290355,2.41077811209591,3.65155045193687,4.39139518911456,7.01790031037691,10.2000345622127,7.8363680369522,2.28988789704845,3.69560947696787,6.90484517771415,0,0,0,0.393364276848904,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,3.19656404608826,0,0,0,10.3387173116643,5.35298357332899,5.19941494402373,5.32150553910154,3.86473057049755,1.83370705696798,4.00724817121796,1.11235332835329,0.324547393654683,0,0.26591592103773,0,0,0,4.77029777680092,4.30117297553062,6.59566953054429,5.08777147731609,0,1.6507082516404,1.8809546988313,3.87625138753993,5.33649394030065,10.3763389957048,0.805658634218294,0,0.24406205754817,3.30896772311282,4.86085168729056,6.07238152331742,5.16417557040191,1.57656072676651,6.13266549863533,2.84779697870439,3.84723662253855,0,0,1.74437620857014,2.48485975847659,14.3092478180975,0.132409180813219,2.0078563452417,3.54668382198357,2.80338800071154,1.06748995729705,10.1133694851036,2.17847724779836,1.61652806483626,2.28846664358842,2.27036141467397,2.88087962239999,1.40592859100278,0.312160076830321,0,0.448346041655403,0.469737994575059,0.809364721840658,1.12360645361799,1.22492502752936,11.7920944619297,0.826606249406124,2.37600571456411,2.22540236350701,2.73048408581408,0.718618141816238,10.7735112930602,4.00379263590285,1.10825646193673,8.77955241761676,11.0335606487647,2.10333282469236,3.17610112848059,1.25572744982203,7.47450860864986,4.02670612203168,1.20036438433761,9.48083268993638,1.54584324027377,3.35010341396862,0.506328996723799,1.46155507741798,0.252433774244115,6.35144300631865,0.646584227275248,0,1.81353776809752,4.91725717700414,0.966304265816484,0.818238361772504,0.573609190778008,0.243947412259191,0,0.116193942869518,0.10366105501537,0.252320850875628,0,1.56449532329816,3.21620469096443,6.90674606762403,0.464367928031979,0,6.50687400219141,6.23763353288976,4.57920956778616,5.5146986366197,4.57546832594053,4.74541238222193,2.42696354688296,4.12065076763227,3.46272441251751,2.95262181849859,1.40241773803446,8.231480226628,2.94017422771084,0,0,0,0,0.122988438543114,1.3725424823882,0.219500570817251,0,1.00528972411631,0.555530670951178,0.325808305310325,0,5.77325368101093,0.231860809950154,3.28744343860301,0,0,0.761016608938393,0,0,0,0,0,0,1.51183915378974,0.992425680696705,1.43293636324557,1.74380363108377,0.766765358330422,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0.822619941626588,0,0,8.40983132590205,1.30788020649984,5.35369486492935,17.8394967745733,0,1.690605505112,20.7431730936199,14.5610411675913,0.257207374262142,0,1.0656887160644,0.285955987316295,2.17048642156577,3.29296134712308,0,0,1.58390374586686,0,1.74306691720059,0.499864955910285,0,0,0,2.63587341040741,3.44585807502342,5.70547620162874,3.76431397335706,0.61642896765115,1.79060963239896,0,0,0,0,0,1.30139853857622,4.63973287666617,0.502548796003046,4.46557126157214,0,0,0,0.736148950314839,5.00170521059677,2.17012018959788,2.70362119990049,7.13715955188647,7.7274183366628,4.56851518471581,5.11608369537122,9.09630016223939,11.3820378421755,10.627609576567,7.74350507875153,11.8161715676593,1.76221041716467,3.0882908142977,0,0,0,0.909382714338778,0,0.604780586659361,0.992431231275107,0.153461973288062,1.40330047216537,0.128139149255701,6.65219423786715,1.12597744800525,1.48418066444991,2.92998418225046,6.92490728721196,1.88892458831761,1.55776328755086,1.51073491997947,0.241718899183244,0.601519410909855,0.828728900423067,0.803701137152247,2.36718518408732,1.04899531967539,3.60959690325929,2.6185214615501,6.27479815341484,10.2297457257282,2.21658420675039,3.4120015221269,3.40187410553031,4.10240240594065,10.7959076883203,17.8824648778943,14.0473136679359,2.29388645740534,3.3243040357149,6.71624264166535,0,0,1.28225062558195,1.96808787419823,1.62689197332152,0.515205058238611,0.54941678891006,1.15513299888823,0.574265537996172,0,1.6068392984416,2.41676795730305,0,0.15350367472613,1.92971201478343,0.966782203814463,1.59518363305651,1.02271952899321,6.23224249527162,0.826424576804891,0.576570202095319,0.382838137483752,1.4162089319777,0,0.31481234683064,0,0.308033580176089,1.59691809095107,0,1.66791797193528,1.43124886741991,3.72158369359667,9.17500331684305,0.571890581771475,2.04718233049067,0,0.636406495851874,0,4.67668389716618,1.09814811894422,2.94531005864216,2.22400729730648,1.58510321173008,0,0.48763373908959,0.243713489631284,0,5.59649636772742,0.141405431953713,0,0.551365343546124,0,0.438450885253763,0,0,3.24656603140326,4.64735247149625,10.7044328962252,3.15504974848913,2.652724107354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| ||
|short_description=p2@C1orf133 | |||
}} | }} |
Latest revision as of 21:33, 24 September 2015
Short description: | p2@C1orf133 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C1orf133_5end |
Coexpression cluster: | NA |
Association with transcript: | 265bp_to_NR_024337, uc001hhx.3_5end |
EntrezGene: | C1orf133 |
HGNC: | 32019 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 1.56e-09 | 17 |
kidney epithelial cell | 1.56e-09 | 17 |
epithelial cell of nephron | 6.86e-09 | 15 |
fibroblast | 8.85e-08 | 76 |
kidney cortical cell | 2.41e-07 | 12 |
renal cortical epithelial cell | 2.41e-07 | 12 |
meso-epithelial cell | 7.73e-07 | 45 |
mesodermal cell | 8.50e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 3.79e-10 | 117 |
excretory tube | 2.50e-09 | 16 |
kidney epithelium | 2.50e-09 | 16 |
vasculature | 3.48e-09 | 78 |
vascular system | 3.48e-09 | 78 |
nephron epithelium | 6.86e-09 | 15 |
renal tubule | 6.86e-09 | 15 |
nephron tubule | 6.86e-09 | 15 |
nephron | 6.86e-09 | 15 |
uriniferous tubule | 6.86e-09 | 15 |
nephrogenic mesenchyme | 6.86e-09 | 15 |
mesenchyme | 9.83e-09 | 160 |
entire embryonic mesenchyme | 9.83e-09 | 160 |
parenchyma | 4.40e-08 | 15 |
cell layer | 7.77e-08 | 309 |
compound organ | 9.41e-08 | 68 |
cavitated compound organ | 1.52e-07 | 31 |
anatomical conduit | 1.93e-07 | 240 |
cortex of kidney | 2.41e-07 | 12 |
renal parenchyma | 2.41e-07 | 12 |
kidney | 2.98e-07 | 26 |
kidney mesenchyme | 2.98e-07 | 26 |
upper urinary tract | 2.98e-07 | 26 |
kidney rudiment | 2.98e-07 | 26 |
kidney field | 2.98e-07 | 26 |
epithelium | 3.16e-07 | 306 |