FFCP PHASE1:Hg19::chr22:41956866..41956877,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27254 | |EntrezGene=27254 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30359 | |HGNC=30359 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y534 | |UniProt=Q9Y534 | ||
|association_with_transcript=99bp_to_ENST00000306149_5end | |association_with_transcript=99bp_to_ENST00000306149_5end | ||
|cluster_id=chr22:41956866..41956877,+ | |||
|description=CAGE_peak_6_at_CSDC2_5end | |description=CAGE_peak_6_at_CSDC2_5end | ||
|id=chr22:41956866..41956877,+ | |id=chr22:41956866..41956877,+ | ||
|ontology_enrichment_celltype=CL:0000669;4.68e-11;4!CL:0002537;7.54e-09;5 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000669;4.68e-11;4!CL:0002537;7.54e-09;5 | ||
|ontology_enrichment_disease=DOID:114;1.06e-21;2!DOID:178;1.12e-11;1!DOID:326;1.12e-11;1!DOID:3978;1.12e-11;1!DOID:3394;1.12e-11;1!DOID:5844;1.12e-11;1!DOID:1287;2.48e-11;4 | |ontology_enrichment_celltype_v019_2=CL:0000669,6.33e-11,4;CL:0002537,1.04e-08,5 | ||
|ontology_enrichment_uberon=UBERON:0003978;3.86e-14;3!UBERON:0000946;3.86e-14;3!UBERON:0002084;1.12e-11;1!UBERON:0006834;1.12e-11;1!UBERON:0002082;1.12e-11;1!UBERON:0002135;3.11e-11;1!UBERON:0002146;3.11e-11;1!UBERON:0005623;3.11e-11;1!UBERON:0007100;4.70e-10;25 | |ontology_enrichment_development_v019=UBERON:0010226;1.12e-11;1!UBERON:0000358;1.45e-11;1!UBERON:0005062;7.71e-11;4!UBERON:0007284;7.71e-11;4 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.06e-21;2!DOID:178;1.12e-11;1!DOID:326;1.12e-11;1!DOID:3978;1.12e-11;1!DOID:3394;1.12e-11;1!DOID:5844;1.12e-11;1!DOID:1287;2.48e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,9.15e-22,2;DOID:178,9.57e-12,1;DOID:326,9.57e-12,1;DOID:3978,9.57e-12,1;DOID:3394,9.57e-12,1;DOID:5844,9.57e-12,1;DOID:1287,2.30e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.61e-21!115;UBERON:0003075!1.51e-11!86;UBERON:0007284!1.51e-11!86;UBERON:0002346!1.10e-10!90;UBERON:0005743!2.86e-09!86;UBERON:0000955!4.90e-09!69;UBERON:0006238!4.90e-09!69;UBERON:0004733!3.15e-08!12;UBERON:0002028!3.15e-08!12;UBERON:0007277!3.15e-08!12;UBERON:0000073!9.29e-08!94;UBERON:0001016!9.29e-08!94;UBERON:0004732!1.74e-07!13;UBERON:0001017!2.19e-07!82;UBERON:0003978!2.45e-07!3;UBERON:0009751!2.45e-07!3;UBERON:0000946!2.45e-07!3;UBERON:0002523!2.45e-07!3;UBERON:0005983!2.45e-07!3;UBERON:0002165!2.45e-07!3;UBERON:0002062!2.45e-07!3;UBERON:0007280!2.45e-07!3;UBERON:0002616!7.26e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;3.86e-14;3!UBERON:0000946;3.86e-14;3!UBERON:0002084;1.12e-11;1!UBERON:0006834;1.12e-11;1!UBERON:0002082;1.12e-11;1!UBERON:0002135;3.11e-11;1!UBERON:0002146;3.11e-11;1!UBERON:0005623;3.11e-11;1!UBERON:0007100;4.70e-10;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,2.12e-14,3;UBERON:0009751,2.12e-14,3;UBERON:0000946,2.12e-14,3;UBERON:0002523,2.12e-14,3;UBERON:0005983,2.12e-14,3;UBERON:0002165,2.12e-14,3;UBERON:0002062,2.12e-14,3;UBERON:0007280,2.12e-14,3;UBERON:0006834,1.18e-11,1;UBERON:0002084,1.31e-11,1;UBERON:0002082,1.31e-11,1;UBERON:0010226,1.31e-11,1;UBERON:0002135,1.60e-11,1;UBERON:0002146,2.42e-11,1;UBERON:0005623,2.42e-11,1;UBERON:0007100,2.28e-09,27;UBERON:0007023,4.68e-09,114 | |||
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| ||
|short_description=p6@CSDC2 | |short_description=p6@CSDC2 | ||
}} | }} |
Latest revision as of 21:50, 24 September 2015
Short description: | p6@CSDC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CSDC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 99bp_to_ENST00000306149_5end |
EntrezGene: | CSDC2 |
HGNC: | 30359 |
UniProt: | Q9Y534 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pericyte cell | 6.33e-11 | 4 |
amnion mesenchymal stem cell | 1.04e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
valve | 2.12e-14 | 3 |
cardiac mesenchyme | 2.12e-14 | 3 |
cardial valve | 2.12e-14 | 3 |
tunica intima | 2.12e-14 | 3 |
heart layer | 2.12e-14 | 3 |
endocardium | 2.12e-14 | 3 |
endocardial cushion | 2.12e-14 | 3 |
presumptive endocardium | 2.12e-14 | 3 |
uterus or analog | 1.18e-11 | 1 |
heart left ventricle | 1.31e-11 | 1 |
cardiac ventricle | 1.31e-11 | 1 |
future cardiac ventricle | 1.31e-11 | 1 |
mitral valve | 1.60e-11 | 1 |
pulmonary valve | 2.42e-11 | 1 |
semi-lunar valve | 2.42e-11 | 1 |
primary circulatory organ | 2.28e-09 | 27 |
adult organism | 4.68e-09 | 114 |
Ontology term | p-value | n |
---|---|---|
heart disease | 9.15e-22 | 2 |
vascular disease | 9.57e-12 | 1 |
ischemia | 9.57e-12 | 1 |
extrinsic cardiomyopathy | 9.57e-12 | 1 |
myocardial ischemia | 9.57e-12 | 1 |
myocardial infarction | 9.57e-12 | 1 |
cardiovascular system disease | 2.30e-11 | 4 |