FFCP PHASE1:Hg19::chrX:33229600..33229611,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1756 | |EntrezGene=1756 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2928 | |HGNC=2928 | ||
|TSSclassifier=strong | |||
|UniProt=P11532 | |UniProt=P11532 | ||
|association_with_transcript=24bp_to_ENST00000357033_5end | |association_with_transcript=24bp_to_ENST00000357033_5end | ||
|cluster_id=chrX:33229600..33229611,- | |||
|coexpression_cluster_id=C1113 | |||
|description=CAGE_peak_7_at_DMD_5end | |description=CAGE_peak_7_at_DMD_5end | ||
|id=chrX:33229600..33229611,- | |id=chrX:33229600..33229611,- | ||
|ontology_enrichment_celltype=CL:0000680!2.73e-07!57;CL:0000056!2.73e-07!57;CL:0000355!2.73e-07!57 | |ontology_enrichment_celltype=CL:0000680!2.73e-07!57;CL:0000056!2.73e-07!57;CL:0000355!2.73e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.41e-09;13!CL:0000515;9.16e-09;3!CL:0002590;5.15e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.51e-08,15;CL:0002590,5.50e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.35e-22!115;UBERON:0002385!4.26e-11!63;UBERON:0001015!4.26e-11!63;UBERON:0000383!4.26e-11!63;UBERON:0001134!7.30e-10!61;UBERON:0002036!7.30e-10!61;UBERON:0003082!7.30e-10!61;UBERON:0007100!9.33e-10!27;UBERON:0000948!2.08e-07!24;UBERON:0005498!2.08e-07!24;UBERON:0004140!2.08e-07!24;UBERON:0009881!2.08e-07!24;UBERON:0004141!2.08e-07!24;UBERON:0003084!2.08e-07!24;UBERON:0007005!2.08e-07!24;UBERON:0004139!2.08e-07!24;UBERON:0004291!2.08e-07!24;UBERON:0004290!2.31e-07!70;UBERON:0000481!5.75e-07!347;UBERON:0000468!8.93e-07!659 | |ontology_enrichment_uberon=UBERON:0007023!7.35e-22!115;UBERON:0002385!4.26e-11!63;UBERON:0001015!4.26e-11!63;UBERON:0000383!4.26e-11!63;UBERON:0001134!7.30e-10!61;UBERON:0002036!7.30e-10!61;UBERON:0003082!7.30e-10!61;UBERON:0007100!9.33e-10!27;UBERON:0000948!2.08e-07!24;UBERON:0005498!2.08e-07!24;UBERON:0004140!2.08e-07!24;UBERON:0009881!2.08e-07!24;UBERON:0004141!2.08e-07!24;UBERON:0003084!2.08e-07!24;UBERON:0007005!2.08e-07!24;UBERON:0004139!2.08e-07!24;UBERON:0004291!2.08e-07!24;UBERON:0004290!2.31e-07!70;UBERON:0000481!5.75e-07!347;UBERON:0000468!8.93e-07!659 | ||
|ontology_enrichment_uberon_v019=UBERON:0005904;1.88e-10;4!UBERON:0001134;6.32e-10;16!UBERON:0002036;6.32e-10;16!UBERON:0006947;5.15e-08;3!UBERON:0004054;5.15e-08;3!UBERON:0005090;3.89e-07;2!UBERON:0001630;3.89e-07;2!UBERON:0007100;4.48e-07;25!UBERON:0002385;6.30e-07;31!UBERON:0001015;6.30e-07;31!UBERON:0000383;6.30e-07;31!UBERON:0000341;8.93e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.97e-13,114;UBERON:0005904,1.48e-10,4;UBERON:0004797,2.43e-09,7;UBERON:0006947,4.07e-08,3;UBERON:0004054,4.07e-08,3;UBERON:0005090,3.90e-07,2;UBERON:0001630,3.90e-07,2;UBERON:0003104,6.55e-07,160;UBERON:0009142,6.55e-07,160;UBERON:0000341,9.86e-07,2 | |||
|phase1_expression=2.18014055124668,0,0.986680828671798,1.0007329835313,0.893922188854576,2.61701557230111,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0.662794751455832,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.383587685530591,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.993943903390637,1.64619665163954,2.1185468930115,2.29469296599051,0,1.12135520028461,0,0,0.933633106199299,0.808264032418128,0.326923806226917,0.454072282934794,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794025282120147,0.179389635688862,0.213557388818567,0,0,0,0.772921620136887,0,0.506328996723799,0.389748020644795,0,0,0.484938170456436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0,0,0,0,0,0.144119953416961,0.37872730027914,0,0,0,1.71072446022705,0.102827492703324,0,0,0.112131084345361,0,0,0.258543431515556,0,0,0,0,0,0,0,0.57191197463259,0,0,0,2.13235169245527,1.58390374586686,0,0.871533458600294,0.299918973546171,0,0,0,2.15662369942424,1.14861935834114,0,3.18518874668674,2.26023954805422,3.22309733831812,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0,0,0,0,0,0,0.601892199455438,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98486246255021,6.44540287809862,0.280660094433074,0.256278298511402,1.53512174720011,0.482561763430822,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,4.82051789532479,0.676695028044854,0.154048617114644,0.307007349452259,0.137836572484531,0.322260734604821,0.290033387828457,0.255679882248303,1.51354460599453,0,0,0.127612712494584,0,0,1.5740617341532,0,0,0,0,0.37064843820784,0.715624433709956,1.48863347743867,2.21465597303108,1.33441135746677,0.767693373934002,0,0,0.78494864019923,0.179872457583315,0.54907405947211,0.824686816419805,0,0,0,0,0.243713489631284,0,0.272999822815972,0,0,0,1.32687795048244,0.438450885253763,0,0,0,0,0,0,0.491245205065606,0.7133421029625,0,0,0.329294892959902,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.10222901961303,0.242721043499027,0,0,0.23874448473769,0,0,0,0.140669416410513,0,0,0,5.18044769452781,0.828851746593443,0,0,0,0,0,0,0,5.52403071566828,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0,6.00212016329617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.59223616106011,0,0,0,0,0.269604531922708,15.248975298677,0.234264445725339,0,0,0,1.18375320854817,1.20990716048664,0,1.64285107034069,0,0,0,0,0,0,0,0.277349346026277,0,0,0,1.92199335066233,0.51595809741485,0,0,0,2.42472541221049,5.64839210825602,1.12990370390266,0,0,0.0633107959558787,0,0,1.06726497369676,0.19980960958213,0,0.80175617316141,0,0,0,0,0,0,0,0,1.20084057741958,0.273810757783986,0,0.429765441419957,0,3.0721064139948,5.95817102430378,0.717873024576814,1.59743200399193,2.14613024068285,8.9268582976749,9.54005309311513,2.88239906833923,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.236417121897595,0,0,0.179287339332845,0,0.714695326373367,2.64836788146173,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0.146552233678082,0,0,0.26446520348538,0,0,1.60181118851542,1.41483874589699,0.414239055347196,0,0,0,0,11.9683916741284,9.2755260788399,10.7220951867212,5.24596209135687,0,0,0,0.1251909307065,0,0.443716206147409,0.0620964029413835,0,0.124980407962107,0.151649117541648,0,0,0,0,0,0,0.554805861502613,0,0.251567901752575,0.889811221596536,0.228840068396924,0.151230923763239,0,0.295710299979268,0.159296767163702,0,0,1.24411862352257,0,0,0.751288044986092,0.761610424337591,0.406870733204662,0.181848659202559,0.107410557042488,0.464033759878494,0,0,0,0.336749488765919,2.52369796457302,0,0,0,0.226705925512272,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,1.41070377476274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48194083552549,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,6.94695649745012,0,0,0.535701835878287,0,0,0,0.177404740325278,0,0,0.203909198930495,0,0,0,2.04082041411336,0,0,3.65263488203798,0,0,0.428859265059938,0,0.348724276104376,0.173858272302579,0,0,1.87790324803345,0.691259661814092,1.29068207646083,0,0,2.54032230114557,0,0,0,0,0,0,14.8908632553216,24.8443992592118,5.799072156691,7.28566489588709,0,0,0,0,0,0,0.926089897295336,0,0,7.35444965261716,0,0.392616934229891,0,1.2679671827502,0.339854229375634,0.0939839179798536,0.128915775947154,0,0,0,0,0,0.917458566809082,0.286679166302903,0,0.0679914901909147,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0.682008283964155,0,0,0.103432995861895,7.03672140273237,5.4754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| ||
|short_description=p7@DMD | |short_description=p7@DMD | ||
}} | }} |
Latest revision as of 22:01, 24 September 2015
Short description: | p7@DMD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_DMD_5end |
Coexpression cluster: | C1113_heart_skeletal_smooth_bladder_penis_tongue_diaphragm |
Association with transcript: | 24bp_to_ENST00000357033_5end |
EntrezGene: | DMD |
HGNC: | 2928 |
UniProt: | P11532 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.51e-08 | 15 |
smooth muscle cell of the brain vasculature | 5.50e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.97e-13 | 114 |
duct of male reproductive system | 1.48e-10 | 4 |
blood vessel layer | 2.43e-09 | 7 |
male genital duct | 4.07e-08 | 3 |
internal male genitalia | 4.07e-08 | 3 |
muscle structure | 3.90e-07 | 2 |
muscle organ | 3.90e-07 | 2 |
mesenchyme | 6.55e-07 | 160 |
entire embryonic mesenchyme | 6.55e-07 | 160 |
throat | 9.86e-07 | 2 |