FFCP PHASE1:Hg19::chr12:7818474..7818487,-: Difference between revisions
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|id=chr12:7818474..7818487,-
|short_description=p1@APOBEC1
|description=CAGE_peak_1_at_APOBEC1_5end
|association_with_transcript=1bp_to_ENST00000229304_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=339 | |EntrezGene=339 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=604 | |HGNC=604 | ||
|TSSclassifier=strong | |||
|UniProt=P41238 | |UniProt=P41238 | ||
|association_with_transcript=1bp_to_ENST00000229304_5end | |||
|cluster_id=chr12:7818474..7818487,- | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_1_at_APOBEC1_5end | |||
|id=chr12:7818474..7818487,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050619!1.07e-14!1;DOID:1357!1.07e-14!1;DOID:3493!8.04e-08!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.71e-17!27;UBERON:0001764!1.07e-14!1;UBERON:0001825!1.07e-14!1;UBERON:0001154!1.41e-14!1;UBERON:0001153!1.41e-14!1;UBERON:0001155!5.17e-14!9;UBERON:0005409!3.32e-13!35;UBERON:0000059!1.42e-11!11;UBERON:0002108!9.25e-09!14;UBERON:0002294!1.99e-08!7;UBERON:0001173!1.99e-08!7;UBERON:0004912!1.99e-08!7;UBERON:0003127!5.74e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;8.15e-60;4!UBERON:0000160;5.51e-46;17!UBERON:0005409;3.74e-36;22!UBERON:0004921;4.68e-22;33!UBERON:0001155;1.26e-15;9!UBERON:0000059;5.58e-13;11!UBERON:0002114;2.59e-12;2!UBERON:0001555;2.86e-10;54!UBERON:0000922;6.04e-09;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,7.37e-60,4;UBERON:0000160,5.51e-46,17;UBERON:0005409,4.59e-32,25;UBERON:0001155,1.31e-15,9;UBERON:0000059,5.76e-13,11;UBERON:0002114,2.59e-12,2;UBERON:0004921,2.22e-07,118 | |||
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|short_description=p1@APOBEC1 | |||
}} | }} |
Latest revision as of 22:22, 24 September 2015
Short description: | p1@APOBEC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_APOBEC1_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 1bp_to_ENST00000229304_5end |
EntrezGene: | APOBEC1 |
HGNC: | 604 |
UniProt: | P41238 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
small intestine | 7.37e-60 | 4 |
intestine | 5.51e-46 | 17 |
gastrointestinal system | 4.59e-32 | 25 |
colon | 1.31e-15 | 9 |
large intestine | 5.76e-13 | 11 |
duodenum | 2.59e-12 | 2 |
subdivision of digestive tract | 2.22e-07 | 118 |