FFCP PHASE1:Hg19::chr11:107729290..107729310,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:107729290..107729310,- to FFCP PHASE1:Hg19::chr11:107729290..107729310,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54733 | |EntrezGene=54733 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23615 | |HGNC=23615 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_ENST00000375682_5end | |||
|cluster_id=chr11:107729290..107729310,- | |||
|description=CAGE_peak_6_at_SLC35F2_5end | |||
|id=chr11:107729290..107729310,- | |||
|ontology_enrichment_celltype=CL:0000066!1.02e-17!254;CL:0002076!6.14e-13!43;CL:0000223!1.11e-11!59;CL:0000220!7.05e-08!246;CL:0002321!1.45e-07!248;CL:0002368!3.82e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002328;1.93e-10;3!CL:0002202;4.06e-09;9!CL:0002632;4.06e-09;9!CL:0002536;1.80e-08;2!CL:0002262;1.64e-07;2!CL:1000398;1.64e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.00e-12,253;CL:0002328,7.46e-11,3;CL:0002202,3.72e-09,9;CL:0002632,3.72e-09,9;CL:0002536,1.95e-08,2;CL:0000223,6.43e-08,58;CL:0002262,1.03e-07,2;CL:1000398,1.03e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!3.71e-12!239;DOID:162!1.27e-11!235;DOID:305!4.58e-09!106;DOID:0050687!5.82e-08!143;DOID:0050686!8.37e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.68e-09!169;UBERON:0000925!2.68e-09!169;UBERON:0006595!2.68e-09!169;UBERON:0001007!4.86e-08!155;UBERON:0001555!4.86e-08!155;UBERON:0007026!4.86e-08!155;UBERON:0001004!2.32e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;3.52e-14;6!UBERON:0003293;3.52e-14;6!UBERON:0003294;3.52e-14;6!UBERON:0010047;3.52e-14;6!UBERON:0003408;3.52e-14;6!UBERON:0000167;3.52e-14;6!UBERON:0001041;6.38e-11;14!UBERON:0004815;1.93e-10;3!UBERON:0002031;1.93e-10;3!UBERON:0001905;2.31e-08;2!UBERON:0002757;2.31e-08;2!UBERON:0010134;2.31e-08;2!UBERON:0005408;2.31e-08;2!UBERON:0001899;2.31e-08;2!UBERON:0001829;6.24e-08;2!UBERON:0001281;1.64e-07;2!UBERON:0003497;1.64e-07;2!UBERON:0003909;1.64e-07;2!UBERON:0003835;1.64e-07;2!UBERON:0002365;5.90e-07;31!UBERON:0002330;5.90e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,5.29e-14,6;UBERON:0003293,5.29e-14,6;UBERON:0003294,5.29e-14,6;UBERON:0010047,5.29e-14,6;UBERON:0000167,5.29e-14,6;UBERON:0004815,7.46e-11,3;UBERON:0002031,7.46e-11,3;UBERON:0002530,1.07e-09,59;UBERON:0001905,2.25e-08,2;UBERON:0002757,2.25e-08,2;UBERON:0010134,2.25e-08,2;UBERON:0005408,2.25e-08,2;UBERON:0001899,2.25e-08,2;UBERON:0003408,2.88e-08,10;UBERON:0001829,5.79e-08,2;UBERON:0001041,7.04e-08,87;UBERON:0001281,1.03e-07,2;UBERON:0003497,1.03e-07,2;UBERON:0003909,1.03e-07,2;UBERON:0003835,1.03e-07,2;UBERON:0002365,3.02e-07,31;UBERON:0002330,3.02e-07,31;UBERON:0004921,3.77e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,2.18441372130172,3.16520373874144,0.123766352960047,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0.286235987131057,0.273748850145768,0.251085279189606,0.458480434487708,0.164201178899891,0.708397031823113,0,0,0,1.83884244895785,1.204823675113,1.84877005083394,0.154934401160603,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.351339142772504,0.196468613246569,0,0.741568885568859,0,0,0,0,0,0,0,0,0.347140501607594,0.56530794192401,1.25849830862972,1.10047216776027,0,0.516833518338658,0.71153252537342,0.66944122552934,0.805658634218294,0,0.24406205754817,1.83831540172934,0,0.357198913136319,0.673588117878509,0.563057402416611,0,0.949265659568129,0.732806975721629,0,0,1.3082821564276,0,0,0,0,0,0,0,0.24666754841716,0.311211035399766,0,0,0,0,0.937285727335186,0.312160076830321,0.570471821544449,0.747243402759005,0.117434498643765,0.161872944368132,0.280901613404497,0.204154171254893,0.122834317311768,0.206651562351531,0,0,0,0,0,0.125118519871964,0.831192346452549,0,0,0,0,0,0,0,0.300091096084402,0.103052529238439,0,0,0.337552664482532,0.0974370051611986,0,0,0,0,0,0,0.773043412653187,0.545492241181669,0.573609190778008,0,0,0,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0.473227200159376,1.01150814046861,0,0.330881918197182,0.217879444092406,0.71181185733329,0.134831308160164,0.196221465125346,0,1.4763109092493,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0,1.64625428112938,4.49607013030478,0.804231779293047,0.833296006426766,0.325808305310325,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,1.87467667973554,0.839910640994298,0.567100388969546,0.626909658919938,0.581267877027924,1.53353071666084,0,0.088048434013226,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0,0.129271715757778,0,0.845302752556,0,0,0,0,0.799266537048298,0,0,0,0,0,0.791951872933429,0,0,2.39935178836937,0,0,0,0,0,0,0,0.61642896765115,0,0.336255431980582,0,0,0,0,1.30139853857622,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0,0,0.300946099727719,0,1.03473071292505,0,0,0,0,0.343143423810856,0,0,0,0,0,1.20956117331872,0,0,0,0.256278298511402,0,0.160853921143607,0,0.925258162815933,0.355123450626254,0.657017248110473,0.519254429183621,0.697262270759755,0.362578348774867,1.60405176242628,0.184161977871793,0.114814448164607,0,0.131124414959424,0.451199612907412,0.308061348417659,0.784349769176855,0,0.73886140225013,0,0.510281115829547,0.647747748306418,0,0,0,0.509752546090077,0,1.11937377361089,0,0,0.512900250232778,0,0.325378394664303,0,0.183138929636687,0,0.574265537996172,1.95018073810956,0,0.096670718292122,0.308097234229289,0.15350367472613,0.551346289938122,0.322260734604821,0,0.340906509664404,0.267096106940212,0.826424576804891,0,0.893288987462089,0.708104465988849,0.464845549297286,0,0,0,0,0.869932992075073,0,0,0,0,0.190630193923825,0.255897791311334,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.608731130888112,0.30982349809975,0.563391205064483,0.143411352204052,0.0982490410131212,0.35667105148125,0.354761064070598,0,0,0,0,0.577332676353072,2.01090682660736,1.08890984861323,0,0.43050537267123,0,0.443430153536676,2.06751060186264,0,0,0,0,0,0,0,0,2.24330549367694,0.962479855263359,0.735120647943095,0,0.577076851905779,0.142283686696828,0.318852545457645,0.399158742865633,0.191505370132367,0.423347165447766,2.27235358192189,0,0.228234679033192,0.313359791546046,0,0.50787533340481,0,0.201799707191048,0,0,0,0.223676107892416,0.333698283423817,0,0,0,0,0,0,0.18714054040822,0,3.76217617423492,0.334330152832435,0.284136146806413,0,0.296964680832639,0,0,0,0.779160935160341,0,0.211125408127993,0.597743964753209,0.276283915531148,0,1.1249555075237,0.246169610922139,0,1.16828856491525,0.358042349351218,0,0,0,0,0,0,0,0,0,0,1.365521379426,0.508507300585533,0,0,0.291604613383254,0,0,0,0,0,0,0,2.50558466093677,0.278847488557207,0.0769502585037971,0,0.46112780877612,0.0897576444097721,0.325942115766024,0,0.274792780205587,0,0,0.156980256395025,0,1.1279783030859,0.784250137270958,0.335643173951685,0.569261198172555,0.476809736941136,1.68798451622422,0.816164040795739,0.565412285735763,0.432777279484182,0.995261931078505,0.0884575645033392,0.611030144933625,0.593042257361244,1.11207545051853,1.25306339406546,0.067401132980677,0,0,0.364909578431332,0,1.21390189767046,0,0,0.30607276163049,0.189559738885464,0.150323419414493,0.103688191397247,0,0.992975867626496,0.941798755221676,0,0.569219092059585,0.416024019039416,0.347119476670262,0,0.34823682632161,0.17472666824203,0.343972064943233,0.774050650312681,0.511625219603299,0.328461828212837,0,0.882561266915003,0.225980740780532,0.137041924646751,0.596143835108969,0,0,0.240476460754601,0.213452994739353,0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| 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| ||
|short_description=p6@SLC35F2 | |||
}} | }} |
Latest revision as of 22:52, 24 September 2015
Short description: | p6@SLC35F2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLC35F2_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_ENST00000375682_5end |
EntrezGene: | SLC35F2 |
HGNC: | 23615 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.00e-12 | 253 |
bronchial epithelial cell | 7.46e-11 | 3 |
epithelial cell of tracheobronchial tree | 3.72e-09 | 9 |
epithelial cell of lower respiratory tract | 3.72e-09 | 9 |
amniotic epithelial cell | 1.95e-08 | 2 |
endodermal cell | 6.43e-08 | 58 |
endothelial cell of sinusoid | 1.03e-07 | 2 |
endothelial cell of hepatic sinusoid | 1.03e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 5.29e-14 | 6 |
gland of oral region | 5.29e-14 | 6 |
gland of foregut | 5.29e-14 | 6 |
oral gland | 5.29e-14 | 6 |
oral cavity | 5.29e-14 | 6 |
lower respiratory tract epithelium | 7.46e-11 | 3 |
epithelium of bronchus | 7.46e-11 | 3 |
gland | 1.07e-09 | 59 |
pineal body | 2.25e-08 | 2 |
regional part of epithalamus | 2.25e-08 | 2 |
secretory circumventricular organ | 2.25e-08 | 2 |
circumventricular organ | 2.25e-08 | 2 |
epithalamus | 2.25e-08 | 2 |
gland of gut | 2.88e-08 | 10 |
major salivary gland | 5.79e-08 | 2 |
foregut | 7.04e-08 | 87 |
hepatic sinusoid | 1.03e-07 | 2 |
abdomen blood vessel | 1.03e-07 | 2 |
sinusoid | 1.03e-07 | 2 |
abdominal segment blood vessel | 1.03e-07 | 2 |
exocrine gland | 3.02e-07 | 31 |
exocrine system | 3.02e-07 | 31 |
subdivision of digestive tract | 3.77e-07 | 118 |