FFCP PHASE1:Hg19::chr22:42343092..42343107,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79019 | |EntrezGene=79019 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18352 | |HGNC=18352 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=29bp_to_ENST00000460824_5end | |association_with_transcript=29bp_to_ENST00000460824_5end | ||
|cluster_id=chr22:42343092..42343107,- | |||
|coexpression_cluster_id=C1332 | |coexpression_cluster_id=C1332 | ||
|description=CAGE_peak_2_at_CENPM_5end | |description=CAGE_peak_2_at_CENPM_5end | ||
|id=chr22:42343092..42343107,- | |id=chr22:42343092..42343107,- | ||
|ontology_enrichment_celltype=CL:0000066!4.50e-13!254;CL:0000548!3.11e-11!679;CL:0000004!3.11e-11!679;CL:0000255!3.11e-11!679;CL:0000012!4.48e-11!682 | |ontology_enrichment_celltype=CL:0000066!4.50e-13!254;CL:0000548!3.11e-11!679;CL:0000004!3.11e-11!679;CL:0000255!3.11e-11!679;CL:0000012!4.48e-11!682 | ||
|ontology_enrichment_celltype_v019=CL:1000449;2.49e-08;15!CL:1000497;4.37e-08;17!CL:0002518;4.37e-08;17!CL:0002681;9.50e-08;12!CL:0002584;9.50e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.16e-09,253;CL:1000449,3.79e-08,15;CL:1000497,6.89e-08,17;CL:0002518,6.89e-08,17;CL:0002681,1.48e-07,12;CL:0002584,1.48e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.08e-30!235;DOID:14566!3.51e-29!239;DOID:2531!2.05e-20!51;DOID:0060083!2.05e-20!51;DOID:0050686!2.61e-20!137;DOID:1240!1.76e-14!39;DOID:0050687!9.97e-13!143;DOID:8692!1.05e-10!31;DOID:305!1.75e-10!106;DOID:0060058!5.25e-07!10 | |ontology_enrichment_disease=DOID:162!3.08e-30!235;DOID:14566!3.51e-29!239;DOID:2531!2.05e-20!51;DOID:0060083!2.05e-20!51;DOID:0050686!2.61e-20!137;DOID:1240!1.76e-14!39;DOID:0050687!9.97e-13!143;DOID:8692!1.05e-10!31;DOID:305!1.75e-10!106;DOID:0060058!5.25e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:2531;1.34e-13;51!DOID:0060083;1.34e-13;51!DOID:1240;7.52e-12;39!DOID:8692;1.13e-10;31!DOID:0060058;1.78e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.41e-23,51;DOID:0060083,1.41e-23,51;DOID:162,1.77e-23,235;DOID:14566,5.53e-22,239;DOID:0050686,1.48e-16,137;DOID:1240,3.58e-16,39;DOID:8692,1.67e-11,31;DOID:0060058,1.82e-08,10;DOID:0050687,5.64e-08,143;DOID:305,9.76e-07,106 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002113;1.15e-08;24!UBERON:0011143;1.15e-08;24!UBERON:0006555;2.49e-08;15!UBERON:0004819;2.49e-08;15!UBERON:0001285;2.49e-08;15!UBERON:0007684;2.49e-08;15!UBERON:0001225;9.50e-08;12!UBERON:0008987;9.50e-08;12!UBERON:0001851;1.12e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,3.79e-08,15;UBERON:0009773,3.79e-08,15;UBERON:0001231,3.79e-08,15;UBERON:0001285,3.79e-08,15;UBERON:0007684,3.79e-08,15;UBERON:0004208,3.79e-08,15;UBERON:0001225,1.48e-07,12;UBERON:0008987,1.48e-07,12;UBERON:0001851,1.67e-07,15;UBERON:0006555,2.59e-07,16;UBERON:0004819,2.59e-07,16;UBERON:0002113,2.92e-07,26;UBERON:0003918,2.92e-07,26;UBERON:0011143,2.92e-07,26;UBERON:0005095,2.92e-07,26;UBERON:0007687,2.92e-07,26 | |||
|phase1_expression=0,0.214100523890983,0,2.00146596706261,0,0,0,0,0,1.47440361900905,3.48900583986214,1.31064823278103,0.527533956456907,0.495065411840187,0,0,0,0,0.975865597581014,7.01790031037691,7.14002419354885,0.940364164434263,1.71741592278634,2.18999080116615,2.38531015230125,13.5251728173874,16.4201178899892,12.5937250101887,0,0,0,1.83884244895785,1.50602959389125,0.369754010166788,9.06366246789529,7.67713855432076,1.76160263600908,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0.569212969109448,0,0.382273228125229,0,0,2.63384084775077,0.196709770113833,0,0.205601498999509,0.83593247695339,0,0,0,0.779873198196215,0.294605907474837,0.443067789167242,0,3.0741916734162,1.69077151827842,2.13769275984779,3.86890024900188,1.44901542867526,0,0,0,1.0197840842781,1.14966148080576,0.34362744548263,0.506039384039006,0.318565414324097,0.651083453856419,0,0,0,0,0,0.821127996921047,0.201606743224732,0,0.144824403882799,0,0.670700859703636,0.767175371061182,2.1686349143074,1.00267582127178,0.289693037921647,0,0,2.45790524626576,1.10864698731282,1.22968699970376,0.392937226493138,2.5500670180478,4.07862887062872,0,0,0,0,0,0,1.39133685156694,0.860234595106124,0.694281003215189,1.69592382577203,0,1.37559020970034,1.25396979922086,0,0,0.66944122552934,1.61131726843659,0,0.24406205754817,1.83831540172934,0,1.60739510911344,2.46982309888787,2.59006405111641,3.06633274931766,1.89853131913626,0.916008719652036,0,0,0.436094052142534,0.496971951695318,1.77282716330412,0,0.860509862246441,1.06400514659507,0.560677600142307,2.1349799145941,0,0.933633106199299,0.67355336034844,1.9615428373615,0.605429710579726,0.576175924479999,0.70296429550139,0.312160076830321,2.2818872861778,0.149448680551801,2.58355897016283,1.61872944368132,1.96631129383148,0.61246251376468,1.71968044236475,0.826606249406124,0,0.741800787835671,0.910161361938026,3.59309070908119,1.34668891163253,1.12606667884768,1.38532057742091,0.438977620880838,1.5324389789951,0.300476117813194,2.26864366320042,2.33206526395521,0.427114777637135,0.635795703478686,3.90118424909723,1.13357782162283,0.772921620136887,0.744467425326359,1.35021065793013,0.68205903612839,0.757301322732344,0.184099797284599,0,0.355009592516614,1.41052937518696,3.05209066158878,0,0.818238361772504,0.286804595389004,1.09776335516636,0.662648841607426,1.39432731443422,1.14027160516907,1.51392510525377,1.45990943630332,0,1.28648187638577,2.76269842704961,0,0,2.72105640091641,2.19160097101532,2.41011029883482,2.31617342738027,3.26819166138609,1.66089433377768,2.96628877952362,2.35465758150415,1.15424147083917,1.4763109092493,0,0,0,0,0,0,20.3073025730739,1.96781501668982,0.857839051492628,0.109750285408626,2.24803506515239,0.904760751704678,0.277765335475589,0.977424915930974,2.07986957055916,0,0.231860809950154,0.117408694235822,1.01056513432752,4.1668696131895,0.761016608938393,4.74122638775565,5.15091697256924,0.246217006087397,0.702012795417713,1.78357394746474,0,0,0.141775097242386,0.268675568108545,1.45316969256981,4.21720947081732,0,0.704387472105808,0,0,0.12624243342638,1.90493682876507,1.52795370223311,1.17217447210047,6.84289784090821,1.23392991243988,1.50171528921959,0.285826432630578,1.90622843387113,0,3.0802080044799,0,0,3.381211010224,0,0,2.31486636835928,4.25547396069835,3.99633268524149,0.142977993658148,0,1.64648067356154,0.65147236858747,0,3.95975936466715,0,0,0.599837947092342,0,0,0,0.479249710983165,0,1.42636905040718,1.01346914667305,0.205476322550383,2.14873155887875,8.6305560875016,0.197030760201927,0.215627574859517,0.128343036279748,1.27047312111232,0,3.09315525111078,0.502548796003046,1.27587750330633,0,0,0,0,0.500170521059677,0,0,0,0.157702415033935,1.17141414992713,0,0,0,0.664225598535437,1.10621501125022,0.695068915744663,1.37060810223918,0.686286847621712,0.206768026122887,0,0.106727557803444,3.03127571446259,3.32870879020994,3.32629322662648,0.248107807818777,0,0,0,1.02341449813341,0,1.48418066444991,0.771048469013278,0.355123450626254,1.8067974323038,0,2.44041794765914,3.14234568938218,0.601519410909855,0.0920809889358963,1.7222167224691,1.63882051206045,0.131124414959424,3.15839729035188,1.07821471946181,10.1965469992991,4.38417673959782,0.527758144464379,6.8240030442538,2.2112181685947,3.23873874153209,9.25363516141736,3.52230368807009,2.50844886927427,3.3133915495855,1.66215201785745,2.46262230194396,2.63111851975121,5.22870902049801,2.3080511260475,2.29610251989794,0.325378394664303,0.103041011647722,2.28923662045859,2.39277549769705,0.574265537996172,0,1.6068392984416,0.290012154876366,3.38906957652218,3.07007349452259,1.92971201478343,0.429680979473094,0.145016693914229,2.38634556765083,0.623224249527161,0.165284915360978,0,0.638063562472921,0,0,0,0.6970372701606,0.308033580176089,0.532306030317022,0,0.37064843820784,0.143124886741991,1.86079184679834,0.316379424718726,0.190630193923825,0.511795582622668,0,0.636406495851874,0.78494864019923,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| ||
|short_description=p2@CENPM | |short_description=p2@CENPM | ||
}} | }} |
Latest revision as of 23:00, 24 September 2015
Short description: | p2@CENPM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CENPM_5end |
Coexpression cluster: | C1332_lymphoma_Reticulocytes_chronic_embryonic_Renal_Hodgkin_Alveolar |
Association with transcript: | 29bp_to_ENST00000460824_5end |
EntrezGene: | CENPM |
HGNC: | 18352 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.16e-09 | 253 |
epithelial cell of nephron | 3.79e-08 | 15 |
kidney cell | 6.89e-08 | 17 |
kidney epithelial cell | 6.89e-08 | 17 |
kidney cortical cell | 1.48e-07 | 12 |
renal cortical epithelial cell | 1.48e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 3.79e-08 | 15 |
renal tubule | 3.79e-08 | 15 |
nephron tubule | 3.79e-08 | 15 |
nephron | 3.79e-08 | 15 |
uriniferous tubule | 3.79e-08 | 15 |
nephrogenic mesenchyme | 3.79e-08 | 15 |
cortex of kidney | 1.48e-07 | 12 |
renal parenchyma | 1.48e-07 | 12 |
cortex | 1.67e-07 | 15 |
excretory tube | 2.59e-07 | 16 |
kidney epithelium | 2.59e-07 | 16 |
kidney | 2.92e-07 | 26 |
kidney mesenchyme | 2.92e-07 | 26 |
upper urinary tract | 2.92e-07 | 26 |
kidney rudiment | 2.92e-07 | 26 |
kidney field | 2.92e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.41e-23 | 51 |
immune system cancer | 1.41e-23 | 51 |
cancer | 1.77e-23 | 235 |
disease of cellular proliferation | 5.53e-22 | 239 |
organ system cancer | 1.48e-16 | 137 |
leukemia | 3.58e-16 | 39 |
myeloid leukemia | 1.67e-11 | 31 |
lymphoma | 1.82e-08 | 10 |
cell type cancer | 5.64e-08 | 143 |
carcinoma | 9.76e-07 | 106 |