FFCP PHASE1:Hg19::chr19:10139428..10139432,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:10139428..10139432,- | |||
|coexpression_cluster_id=C51 | |coexpression_cluster_id=C51 | ||
|description=CAGE_peak_at_chr19:10139428..10139432,- | |description=CAGE_peak_at_chr19:10139428..10139432,- | ||
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|ontology_enrichment_celltype=CL:0002322!1.20e-24!5;CL:0000148!1.37e-12!10;CL:0000541!1.37e-12!10;CL:0000313!2.82e-09!1;CL:0000147!4.88e-09!14 | |ontology_enrichment_celltype=CL:0002322!1.20e-24!5;CL:0000148!1.37e-12!10;CL:0000541!1.37e-12!10;CL:0000313!2.82e-09!1;CL:0000147!4.88e-09!14 | ||
|ontology_enrichment_celltype_v019=CL:0000313;9.79e-26;1!CL:0000159;1.37e-13;2!CL:0002178;1.67e-09;3!CL:0000149;1.69e-07;4 | |ontology_enrichment_celltype_v019=CL:0000313;9.79e-26;1!CL:0000159;1.37e-13;2!CL:0002178;1.67e-09;3!CL:0000149;1.69e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.26e-25,1;CL:0000159,1.55e-13,2;CL:0002178,1.54e-09,3;CL:0000149,1.69e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.94e-11;10!UBERON:0005564;6.94e-11;10!UBERON:0003104;3.92e-08;31 | |ontology_enrichment_development_v019=UBERON:0009117;6.94e-11;10!UBERON:0005564;6.94e-11;10!UBERON:0003104;3.92e-08;31 | ||
|ontology_enrichment_disease=DOID:3493!4.19e-17!2;DOID:2152!2.82e-09!1;DOID:1799!7.27e-09!1;DOID:10165!7.27e-09!1;DOID:1798!7.27e-09!1;DOID:299!1.21e-07!25;DOID:305!6.25e-07!106 | |ontology_enrichment_disease=DOID:3493!4.19e-17!2;DOID:2152!2.82e-09!1;DOID:1799!7.27e-09!1;DOID:10165!7.27e-09!1;DOID:1798!7.27e-09!1;DOID:299!1.21e-07!25;DOID:305!6.25e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:3493;4.00e-50;2!DOID:2152;9.79e-26;1!DOID:299;1.39e-09;25!DOID:3119;5.55e-08;14 | |ontology_enrichment_disease_v019=DOID:3493;4.00e-50;2!DOID:2152;9.79e-26;1!DOID:299;1.39e-09;25!DOID:3119;5.55e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,3.11e-50,2;DOID:2152,1.26e-25,1;DOID:299,1.39e-09,25;DOID:3119,5.36e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004911!2.82e-09!1;UBERON:0000997!9.91e-09!1;UBERON:0005056!9.91e-09!1 | |ontology_enrichment_uberon=UBERON:0004911!2.82e-09!1;UBERON:0000997!9.91e-09!1;UBERON:0005056!9.91e-09!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0004911;9.79e-26;1!UBERON:0004909;1.37e-13;2!UBERON:0001052;1.92e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0004911;9.79e-26;1!UBERON:0004909;1.37e-13;2!UBERON:0001052;1.92e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.26e-25,1;UBERON:0004909,1.55e-13,2;UBERON:0001052,1.92e-07,4 | |||
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|short_description=p@chr19:10139428..10139432,- | |short_description=p@chr19:10139428..10139432,- | ||
}} | }} |
Latest revision as of 23:04, 24 September 2015
Short description: | p@chr19:10139428..10139432, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:10139428..10139432, - |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.26e-25 | 1 |
seromucus secreting cell | 1.55e-13 | 2 |
epithelial cell of stomach | 1.54e-09 | 3 |
visual pigment cell | 1.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.26e-25 | 1 |
epithelium of gonad | 1.55e-13 | 2 |
rectum | 1.92e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 3.11e-50 | 2 |
ovary epithelial cancer | 1.26e-25 | 1 |
adenocarcinoma | 1.39e-09 | 25 |
gastrointestinal system cancer | 5.36e-08 | 14 |