FFCP PHASE1:Hg19::chr14:62037117..62037132,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=400221 | |EntrezGene=400221 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=G3V2X1 | |UniProt=G3V2X1 | ||
|association_with_transcript=-125bp_to_ENST00000229465,NR_039985,uc001xfp.2_5end | |association_with_transcript=-125bp_to_ENST00000229465,NR_039985,uc001xfp.2_5end | ||
|cluster_id=chr14:62037117..62037132,+ | |||
|description=CAGE_peak_7_at_FLJ22447_5end | |description=CAGE_peak_7_at_FLJ22447_5end | ||
|id=chr14:62037117..62037132,+ | |id=chr14:62037117..62037132,+ | ||
|ontology_enrichment_celltype=CL:0002150!3.69e-09!3;CL:0000861!3.69e-09!3;CL:0000064!8.19e-09!3;CL:0005012!8.19e-09!3;CL:0000067!8.19e-09!3;CL:0002304!8.19e-09!3;CL:0002548!5.03e-07!6 | |ontology_enrichment_celltype=CL:0002150!3.69e-09!3;CL:0000861!3.69e-09!3;CL:0000064!8.19e-09!3;CL:0005012!8.19e-09!3;CL:0000067!8.19e-09!3;CL:0002304!8.19e-09!3;CL:0002548!5.03e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002379;9.82e-20;1!CL:0000342;3.56e-19;1!CL:0002565;3.56e-19;1!CL:0000306;5.39e-19;4!CL:0002222;5.39e-19;4!CL:0002224;5.39e-19;4!CL:0000075;4.54e-11;27!CL:0000064;2.88e-07;3!CL:0000067;2.88e-07;3!CL:0005012;2.88e-07;3!CL:0002304;2.88e-07;3!CL:0000746;2.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,8.95e-20,1;CL:0000342,3.91e-19,1;CL:0002565,3.91e-19,1;CL:0000306,6.77e-19,4;CL:0002222,6.77e-19,4;CL:0002224,6.77e-19,4;CL:0000075,4.60e-11,27;CL:0000064,2.63e-07,3;CL:0000067,2.63e-07,3;CL:0005012,2.63e-07,3;CL:0002304,2.63e-07,3;CL:0000746,3.16e-07,3;CL:0000513,3.16e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000513;2.88e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;9.82e-20;1!DOID:3565;9.82e-20;1!DOID:4468;1.89e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,8.95e-20,1;DOID:3565,8.95e-20,1;DOID:4468,2.07e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0007625!2.52e-14!11;UBERON:0000488!3.01e-11!4;UBERON:0001778!8.19e-09!3;UBERON:0001775!8.19e-09!3;UBERON:0001801!2.01e-08!14;UBERON:0000019!1.32e-07!19;UBERON:0000047!1.32e-07!19;UBERON:0004088!1.32e-07!19;UBERON:0003072!1.32e-07!19;UBERON:0003071!1.32e-07!19;UBERON:0004128!1.32e-07!19;UBERON:0002203!1.89e-07!6;UBERON:0001768!1.89e-07!6;UBERON:0000970!3.81e-07!20;UBERON:0002104!9.87e-07!21;UBERON:0001456!9.87e-07!21 | |ontology_enrichment_uberon=UBERON:0007625!2.52e-14!11;UBERON:0000488!3.01e-11!4;UBERON:0001778!8.19e-09!3;UBERON:0001775!8.19e-09!3;UBERON:0001801!2.01e-08!14;UBERON:0000019!1.32e-07!19;UBERON:0000047!1.32e-07!19;UBERON:0004088!1.32e-07!19;UBERON:0003072!1.32e-07!19;UBERON:0003071!1.32e-07!19;UBERON:0004128!1.32e-07!19;UBERON:0002203!1.89e-07!6;UBERON:0001768!1.89e-07!6;UBERON:0000970!3.81e-07!20;UBERON:0002104!9.87e-07!21;UBERON:0001456!9.87e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0007625;2.25e-26;11!UBERON:0001801;7.92e-21;14!UBERON:0002506;3.56e-19;1!UBERON:0001769;3.56e-19;1!UBERON:0010077;5.39e-19;4!UBERON:0005389;5.39e-19;4!UBERON:0000484;5.39e-19;4!UBERON:0000965;5.39e-19;4!UBERON:0001803;5.39e-19;4!UBERON:0000488;8.11e-19;4!UBERON:0000019;1.84e-15;19!UBERON:0000047;1.84e-15;19!UBERON:0004088;1.84e-15;19!UBERON:0010230;1.84e-15;19!UBERON:0000970;1.04e-14;20!UBERON:0002104;5.01e-14;21!UBERON:0001456;5.01e-14;21!UBERON:0002203;6.90e-13;6!UBERON:0001768;6.90e-13;6!UBERON:0002200;6.90e-13;6!UBERON:0000020;7.71e-13;23!UBERON:0001032;2.55e-12;24!UBERON:0004456;2.55e-12;24!UBERON:0010371;1.58e-09;31!UBERON:0006876;1.90e-07;11!UBERON:0001778;2.88e-07;3!UBERON:0001775;2.88e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,2.49e-26,11;UBERON:0001801,8.56e-21,14;UBERON:0002506,3.91e-19,1;UBERON:0001769,3.91e-19,1;UBERON:0010077,6.77e-19,4;UBERON:0005389,6.77e-19,4;UBERON:0000484,6.77e-19,4;UBERON:0002546,6.77e-19,4;UBERON:0000965,6.77e-19,4;UBERON:0001803,6.77e-19,4;UBERON:0003073,6.77e-19,4;UBERON:0005426,6.77e-19,4;UBERON:0000488,7.41e-19,4;UBERON:0000019,1.10e-14,20;UBERON:0000047,1.10e-14,20;UBERON:0010312,1.10e-14,20;UBERON:0004088,1.10e-14,20;UBERON:0010230,1.10e-14,20;UBERON:0003072,1.10e-14,20;UBERON:0004128,1.10e-14,20;UBERON:0003071,1.10e-14,20;UBERON:0000970,5.28e-14,21;UBERON:0002104,5.28e-14,21;UBERON:0001456,2.20e-13,22;UBERON:0002203,6.50e-13,6;UBERON:0001768,6.50e-13,6;UBERON:0002200,6.50e-13,6;UBERON:0000020,2.67e-12,24;UBERON:0001032,2.67e-12,24;UBERON:0004456,2.67e-12,24;UBERON:0000076,6.06e-10,8;UBERON:0005085,1.35e-09,31;UBERON:0006876,1.84e-07,11;UBERON:0001778,2.63e-07,3;UBERON:0001775,2.63e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0.32389366601898,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0.580418477257168,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.12786256184353,0,0,0,0,0,0.472674085820339,0.886917589850256,1.66886092816939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0.808264032418128,0.490385709340376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,1.3725424823882,0,0,0,0,0,0,2.88662684050547,0.231860809950154,1.05667824812239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0,1.58390374586686,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0.462145851343933,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0.10115778085555,0,0,0.6970372701606,0,0,0,0,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.341826167541004,0,0,0.108647371922008,0,0.183195186803725,0,0,0,0,0,0,0,0,0,2.3209787098083,0.489698424477443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853828638089378,0,0,0.0979923974143777,0,0.17472666824203,0,2.99944626996164,3.36210858596454,1.97077096927702,0,0,0,0.411125773940253,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0.135904206073614,0,0.101998217636322,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,3.52898729547258,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0.15543720058278,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0.429642228169954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0.60511520611056,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0.244209805832924,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0.32389366601898,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0.580418477257168,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.12786256184353,0,0,0,0,0,0.472674085820339,0.886917589850256,1.66886092816939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0.808264032418128,0.490385709340376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,1.3725424823882,0,0,0,0,0,0,2.88662684050547,0.231860809950154,1.05667824812239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0,1.58390374586686,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0.462145851343933,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0.10115778085555,0,0,0.6970372701606,0,0,0,0,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.341826167541004,0,0,0.108647371922008,0,0.183195186803725,0,0,0,0,0,0,0,0,0,2.3209787098083,0.489698424477443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853828638089378,0,0,0.0979923974143777,0,0.17472666824203,0,2.99944626996164,3.36210858596454,1.97077096927702,0,0,0,0.411125773940253,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0.135904206073614,0,0.101998217636322,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,3.52898729547258,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0.15543720058278,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0.429642228169954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0.60511520611056,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0.244209805832924,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@FLJ22447 | |short_description=p7@FLJ22447 | ||
}} | }} |
Latest revision as of 23:07, 24 September 2015
Short description: | p7@FLJ22447 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_FLJ22447_5end |
Coexpression cluster: | NA |
Association with transcript: | -125bp_to_ENST00000229465, NR_039985, uc001xfp.2_5end |
EntrezGene: | FLJ22447 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 8.95e-20 | 1 |
pigment cell (sensu Vertebrata) | 3.91e-19 | 1 |
iris pigment epithelial cell | 3.91e-19 | 1 |
crystallin accumulating cell | 6.77e-19 | 4 |
vertebrate lens cell | 6.77e-19 | 4 |
lens epithelial cell | 6.77e-19 | 4 |
columnar/cuboidal epithelial cell | 4.60e-11 | 27 |
ciliated cell | 2.63e-07 | 3 |
ciliated epithelial cell | 2.63e-07 | 3 |
multi-ciliated epithelial cell | 2.63e-07 | 3 |
non-pigmented ciliary epithelial cell | 2.63e-07 | 3 |
cardiac muscle cell | 3.16e-07 | 3 |
cardiac muscle myoblast | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 2.49e-26 | 11 |
anterior segment of eyeball | 8.56e-21 | 14 |
iris epithelium | 3.91e-19 | 1 |
iris | 3.91e-19 | 1 |
cuboidal epithelium | 6.77e-19 | 4 |
transparent eye structure | 6.77e-19 | 4 |
simple cuboidal epithelium | 6.77e-19 | 4 |
cranial placode | 6.77e-19 | 4 |
lens of camera-type eye | 6.77e-19 | 4 |
epithelium of lens | 6.77e-19 | 4 |
lens placode | 6.77e-19 | 4 |
lens vesicle | 6.77e-19 | 4 |
atypical epithelium | 7.41e-19 | 4 |
camera-type eye | 1.10e-14 | 20 |
simple eye | 1.10e-14 | 20 |
immature eye | 1.10e-14 | 20 |
ocular region | 1.10e-14 | 20 |
eyeball of camera-type eye | 1.10e-14 | 20 |
optic cup | 1.10e-14 | 20 |
optic vesicle | 1.10e-14 | 20 |
eye primordium | 1.10e-14 | 20 |
eye | 5.28e-14 | 21 |
visual system | 5.28e-14 | 21 |
face | 2.20e-13 | 22 |
vasculature of eye | 6.50e-13 | 6 |
uvea | 6.50e-13 | 6 |
vasculature of head | 6.50e-13 | 6 |
sense organ | 2.67e-12 | 24 |
sensory system | 2.67e-12 | 24 |
entire sense organ system | 2.67e-12 | 24 |
external ectoderm | 6.06e-10 | 8 |
ectodermal placode | 1.35e-09 | 31 |
vasculature of organ | 1.84e-07 | 11 |
ciliary epithelium | 2.63e-07 | 3 |
ciliary body | 2.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 8.95e-20 | 1 |
meningioma | 8.95e-20 | 1 |
clear cell adenocarcinoma | 2.07e-10 | 2 |