FFCP PHASE1:Hg19::chr22:42372970..42372971,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55964 | |EntrezGene=55964 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10750 | |HGNC=10750 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z686 | |UniProt=B7Z686 | ||
|association_with_transcript=-22bp_to_ENST00000291236_5end | |association_with_transcript=-22bp_to_ENST00000291236_5end | ||
|cluster_id=chr22:42372970..42372971,+ | |||
|coexpression_cluster_id=C561 | |coexpression_cluster_id=C561 | ||
|description=CAGE_peak_5_at_SEPT3_5end | |description=CAGE_peak_5_at_SEPT3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;4.66e-21;2 | |ontology_enrichment_celltype_v019=CL:0000047;4.66e-21;2 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.89e-75!82;UBERON:0005743!9.32e-75!86;UBERON:0001049!9.97e-75!57;UBERON:0005068!9.97e-75!57;UBERON:0006241!9.97e-75!57;UBERON:0007135!9.97e-75!57;UBERON:0000073!5.56e-70!94;UBERON:0001016!5.56e-70!94;UBERON:0002616!6.78e-60!59;UBERON:0002780!1.43e-59!41;UBERON:0001890!1.43e-59!41;UBERON:0006240!1.43e-59!41;UBERON:0000955!4.34e-59!69;UBERON:0006238!4.34e-59!69;UBERON:0003075!2.41e-58!86;UBERON:0007284!2.41e-58!86;UBERON:0003080!5.20e-58!42;UBERON:0001893!1.09e-57!34;UBERON:0002346!2.45e-55!90;UBERON:0002791!1.45e-54!33;UBERON:0002020!1.15e-52!34;UBERON:0003528!1.15e-52!34;UBERON:0001869!4.99e-52!32;UBERON:0003056!8.61e-44!61;UBERON:0002619!1.67e-36!22;UBERON:0004121!1.90e-36!169;UBERON:0000956!5.97e-36!25;UBERON:0000203!5.97e-36!25;UBERON:0000924!2.29e-35!173;UBERON:0006601!2.29e-35!173;UBERON:0000033!2.66e-35!123;UBERON:0007023!7.09e-35!115;UBERON:0000153!3.11e-33!129;UBERON:0007811!3.11e-33!129;UBERON:0001950!1.71e-30!20;UBERON:0002420!2.23e-24!9;UBERON:0007245!2.23e-24!9;UBERON:0010009!2.23e-24!9;UBERON:0010011!2.23e-24!9;UBERON:0000454!2.23e-24!9;UBERON:0001871!3.64e-21!7;UBERON:0000349!1.59e-18!5;UBERON:0002308!3.83e-18!9;UBERON:0000125!3.83e-18!9;UBERON:0009663!9.71e-18!7;UBERON:0003076!4.35e-17!15;UBERON:0003057!4.35e-17!15;UBERON:0000025!1.04e-15!194;UBERON:0000200!9.80e-15!6;UBERON:0004111!8.98e-12!241;UBERON:0002240!3.47e-11!3;UBERON:0002771!4.58e-11!3;UBERON:0002298!1.17e-10!8;UBERON:0000483!5.22e-10!309;UBERON:0000119!8.04e-10!312;UBERON:0004733!9.36e-10!12;UBERON:0002028!9.36e-10!12;UBERON:0007277!9.36e-10!12;UBERON:0000477!2.84e-09!286;UBERON:0004732!5.93e-09!13;UBERON:0000369!6.35e-09!4;UBERON:0002435!6.35e-09!4;UBERON:0000204!6.35e-09!4;UBERON:0010082!6.35e-09!4;UBERON:0000475!7.41e-09!365;UBERON:0001876!1.60e-08!2;UBERON:0000064!1.80e-08!219;UBERON:0001954!1.92e-08!2;UBERON:0003022!1.92e-08!2;UBERON:0002421!1.92e-08!2;UBERON:0002600!1.92e-08!2;UBERON:0001875!6.90e-08!2;UBERON:0006514!6.90e-08!2;UBERON:0002360!7.14e-08!2;UBERON:0000094!7.14e-08!2;UBERON:0007645!7.14e-08!2;UBERON:0002021!6.01e-07!5;UBERON:0005174!7.22e-07!5;UBERON:0001137!7.22e-07!5 | |ontology_enrichment_uberon=UBERON:0001017!2.89e-75!82;UBERON:0005743!9.32e-75!86;UBERON:0001049!9.97e-75!57;UBERON:0005068!9.97e-75!57;UBERON:0006241!9.97e-75!57;UBERON:0007135!9.97e-75!57;UBERON:0000073!5.56e-70!94;UBERON:0001016!5.56e-70!94;UBERON:0002616!6.78e-60!59;UBERON:0002780!1.43e-59!41;UBERON:0001890!1.43e-59!41;UBERON:0006240!1.43e-59!41;UBERON:0000955!4.34e-59!69;UBERON:0006238!4.34e-59!69;UBERON:0003075!2.41e-58!86;UBERON:0007284!2.41e-58!86;UBERON:0003080!5.20e-58!42;UBERON:0001893!1.09e-57!34;UBERON:0002346!2.45e-55!90;UBERON:0002791!1.45e-54!33;UBERON:0002020!1.15e-52!34;UBERON:0003528!1.15e-52!34;UBERON:0001869!4.99e-52!32;UBERON:0003056!8.61e-44!61;UBERON:0002619!1.67e-36!22;UBERON:0004121!1.90e-36!169;UBERON:0000956!5.97e-36!25;UBERON:0000203!5.97e-36!25;UBERON:0000924!2.29e-35!173;UBERON:0006601!2.29e-35!173;UBERON:0000033!2.66e-35!123;UBERON:0007023!7.09e-35!115;UBERON:0000153!3.11e-33!129;UBERON:0007811!3.11e-33!129;UBERON:0001950!1.71e-30!20;UBERON:0002420!2.23e-24!9;UBERON:0007245!2.23e-24!9;UBERON:0010009!2.23e-24!9;UBERON:0010011!2.23e-24!9;UBERON:0000454!2.23e-24!9;UBERON:0001871!3.64e-21!7;UBERON:0000349!1.59e-18!5;UBERON:0002308!3.83e-18!9;UBERON:0000125!3.83e-18!9;UBERON:0009663!9.71e-18!7;UBERON:0003076!4.35e-17!15;UBERON:0003057!4.35e-17!15;UBERON:0000025!1.04e-15!194;UBERON:0000200!9.80e-15!6;UBERON:0004111!8.98e-12!241;UBERON:0002240!3.47e-11!3;UBERON:0002771!4.58e-11!3;UBERON:0002298!1.17e-10!8;UBERON:0000483!5.22e-10!309;UBERON:0000119!8.04e-10!312;UBERON:0004733!9.36e-10!12;UBERON:0002028!9.36e-10!12;UBERON:0007277!9.36e-10!12;UBERON:0000477!2.84e-09!286;UBERON:0004732!5.93e-09!13;UBERON:0000369!6.35e-09!4;UBERON:0002435!6.35e-09!4;UBERON:0000204!6.35e-09!4;UBERON:0010082!6.35e-09!4;UBERON:0000475!7.41e-09!365;UBERON:0001876!1.60e-08!2;UBERON:0000064!1.80e-08!219;UBERON:0001954!1.92e-08!2;UBERON:0003022!1.92e-08!2;UBERON:0002421!1.92e-08!2;UBERON:0002600!1.92e-08!2;UBERON:0001875!6.90e-08!2;UBERON:0006514!6.90e-08!2;UBERON:0002360!7.14e-08!2;UBERON:0000094!7.14e-08!2;UBERON:0007645!7.14e-08!2;UBERON:0002021!6.01e-07!5;UBERON:0005174!7.22e-07!5;UBERON:0001137!7.22e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0002022;1.48e-40;1!UBERON:0001874;1.48e-40;1!UBERON:0001896;1.60e-14;3!UBERON:0005383;1.60e-14;3!UBERON:0005290;1.60e-14;3!UBERON:0005382;1.60e-14;3!UBERON:0000369;3.10e-11;4!UBERON:0002435;3.10e-11;4!UBERON:0000204;3.10e-11;4!UBERON:0000955;2.56e-09;68!UBERON:0001017;2.43e-08;75!UBERON:0002298;6.33e-08;6!UBERON:0001016;8.75e-08;83!UBERON:0000073;2.62e-07;53!UBERON:0002616;2.62e-07;53!UBERON:0009663;5.70e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0002022;1.48e-40;1!UBERON:0001874;1.48e-40;1!UBERON:0001896;1.60e-14;3!UBERON:0005383;1.60e-14;3!UBERON:0005290;1.60e-14;3!UBERON:0005382;1.60e-14;3!UBERON:0000369;3.10e-11;4!UBERON:0002435;3.10e-11;4!UBERON:0000204;3.10e-11;4!UBERON:0000955;2.56e-09;68!UBERON:0001017;2.43e-08;75!UBERON:0002298;6.33e-08;6!UBERON:0001016;8.75e-08;83!UBERON:0000073;2.62e-07;53!UBERON:0002616;2.62e-07;53!UBERON:0009663;5.70e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001874,9.91e-41,1;UBERON:0002022,3.30e-40,1;UBERON:0005383,1.40e-14,3;UBERON:0005382,1.40e-14,3;UBERON:0001896,1.83e-14,3;UBERON:0005290,1.83e-14,3;UBERON:0010096,1.83e-14,3;UBERON:0001017,1.45e-12,81;UBERON:0001016,2.13e-11,89;UBERON:0000369,2.80e-11,4;UBERON:0002435,2.80e-11,4;UBERON:0000204,2.80e-11,4;UBERON:0010082,2.80e-11,4;UBERON:0000955,9.88e-10,68;UBERON:0006238,9.88e-10,68;UBERON:0002298,6.78e-08,6;UBERON:0000073,2.22e-07,53;UBERON:0002616,2.22e-07,53;UBERON:0001049,4.98e-07,56;UBERON:0005068,4.98e-07,56;UBERON:0006241,4.98e-07,56;UBERON:0007135,4.98e-07,56;UBERON:0009663,5.38e-07,7 | |||
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|short_description=p5@SEPT3 | |short_description=p5@SEPT3 | ||
}} | }} |
Latest revision as of 23:09, 24 September 2015
Short description: | p5@SEPT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SEPT3_5end |
Coexpression cluster: | C561_brain_Neural_spinal_Neurons_parietal_temporal_occipital |
Association with transcript: | -22bp_to_ENST00000291236_5end |
EntrezGene: | SEPT3 |
HGNC: | 10750 |
UniProt: | B7Z686 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
putamen | 9.91e-41 | 1 |
insula | 3.30e-40 | 1 |
caudate-putamen | 1.40e-14 | 3 |
dorsal striatum | 1.40e-14 | 3 |
medulla oblongata | 1.83e-14 | 3 |
myelencephalon | 1.83e-14 | 3 |
future myelencephalon | 1.83e-14 | 3 |
central nervous system | 1.45e-12 | 81 |
nervous system | 2.13e-11 | 89 |
corpus striatum | 2.80e-11 | 4 |
striatum | 2.80e-11 | 4 |
ventral part of telencephalon | 2.80e-11 | 4 |
future corpus striatum | 2.80e-11 | 4 |
brain | 9.88e-10 | 68 |
future brain | 9.88e-10 | 68 |
brainstem | 6.78e-08 | 6 |
regional part of nervous system | 2.22e-07 | 53 |
regional part of brain | 2.22e-07 | 53 |
neural tube | 4.98e-07 | 56 |
neural rod | 4.98e-07 | 56 |
future spinal cord | 4.98e-07 | 56 |
neural keel | 4.98e-07 | 56 |
telencephalic nucleus | 5.38e-07 | 7 |