FFCP PHASE1:Hg19::chr12:80084737..80084763,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5074 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8614 | |||
|TSSclassifier=strong | |||
|UniProt=Q96IZ0 | |||
|association_with_transcript=26bp_to_NM_002583,uc001syx.2_5end | |||
|cluster_id=chr12:80084737..80084763,- | |||
|coexpression_cluster_id=C1688 | |||
|description=CAGE_peak_3_at_PAWR_5end | |||
|id=chr12:80084737..80084763,- | |||
|ontology_enrichment_celltype=CL:0000066!2.26e-52!254;CL:0002321!3.68e-13!248;CL:0000076!6.35e-13!62;CL:0000220!1.36e-12!246;CL:0000223!2.00e-11!59;CL:0002076!4.45e-10!43;CL:0000077!7.95e-09!19 | |||
|ontology_enrichment_celltype_v019=CL:0000077;4.59e-09;19!CL:0002076;1.46e-08;42!CL:0002251;8.08e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.38e-52,253;CL:0000076,1.31e-12,63;CL:0000223,4.45e-12,58;CL:0002321,1.09e-11,250;CL:0002076,6.49e-11,42;CL:0000077,4.89e-09,19;CL:0002251,9.11e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.51e-09;29!UBERON:0001041;3.66e-08;30 | |||
|ontology_enrichment_disease=DOID:305!9.55e-32!106;DOID:0050687!6.12e-31!143;DOID:162!2.51e-17!235;DOID:14566!1.06e-16!239;DOID:299!4.57e-08!25;DOID:7!2.83e-07!39;DOID:1749!3.24e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:305;4.35e-10;106!DOID:299;4.04e-08;25!DOID:1749;2.20e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.57e-32,106;DOID:0050687,6.49e-31,143;DOID:162,7.43e-18,235;DOID:14566,5.11e-17,239;DOID:299,2.96e-08,25;DOID:1749,2.22e-07,14;DOID:7,6.70e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0004119!8.88e-18!169;UBERON:0000925!8.88e-18!169;UBERON:0006595!8.88e-18!169;UBERON:0001007!1.10e-15!155;UBERON:0001555!1.10e-15!155;UBERON:0007026!1.10e-15!155;UBERON:0000466!3.17e-15!126;UBERON:0000077!1.65e-13!130;UBERON:0009569!2.89e-13!113;UBERON:0000464!1.06e-12!104;UBERON:0004921!1.07e-12!129;UBERON:0004185!1.07e-12!129;UBERON:0001048!4.28e-11!168;UBERON:0005911!1.09e-10!82;UBERON:0001004!4.78e-10!72;UBERON:0000468!7.65e-10!659;UBERON:0001041!8.49e-10!98;UBERON:0005177!2.62e-09!107;UBERON:0008947!3.14e-09!38;UBERON:0003258!3.14e-09!38;UBERON:0000475!3.37e-09!365;UBERON:0003104!8.59e-09!238;UBERON:0009142!8.59e-09!238;UBERON:0002553!1.11e-08!70;UBERON:0000481!1.35e-08!347;UBERON:0005153!1.84e-08!37;UBERON:0000065!2.13e-08!53;UBERON:0002100!3.96e-08!216;UBERON:0000477!5.36e-08!286;UBERON:0000062!5.71e-08!511;UBERON:0003886!1.37e-07!63;UBERON:0000915!3.27e-07!52;UBERON:0005156!3.79e-07!59;UBERON:0000990!3.79e-07!59;UBERON:0002417!5.42e-07!61;UBERON:0000916!5.42e-07!61;UBERON:0000064!6.15e-07!219;UBERON:0004111!7.94e-07!241;UBERON:0002530!9.89e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0000065;5.45e-08;44!UBERON:0000072;1.49e-07;37!UBERON:0004807;9.88e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.59e-17,160;UBERON:0000925,1.59e-17,160;UBERON:0006595,1.59e-17,160;UBERON:0001007,2.64e-15,145;UBERON:0001555,2.64e-15,145;UBERON:0007026,2.64e-15,145;UBERON:0009569,3.88e-13,112;UBERON:0004921,1.33e-12,118;UBERON:0005911,4.16e-11,82;UBERON:0001004,6.02e-10,74;UBERON:0001041,6.35e-10,87;UBERON:0005177,1.18e-09,101;UBERON:0001048,1.91e-09,160;UBERON:0008947,3.29e-09,38;UBERON:0003258,3.29e-09,38;UBERON:0005153,1.57e-08,37;UBERON:0000065,1.81e-08,54;UBERON:0000915,1.57e-07,52;UBERON:0005156,4.61e-07,59;UBERON:0000990,4.61e-07,59;UBERON:0002100,4.83e-07,199;UBERON:0002530,5.38e-07,59 | |||
|phase1_expression=7.99384868790449,5.1384125733836,11.5582611358696,8.00586386825043,12.0679495495368,6.97870819280295,0,0,0,13.515366507583,22.3296373751177,4.15038607047327,5.80287352102598,0.990130823680373,1.98838425436749,4.03395087871065,1.80808358407193,0.730310090387373,3.41552959153355,2.21617904538218,3.87601313364081,1.25381888591235,3.72106783270374,5.2012281527696,15.6928299493503,0.840547463227464,0.246301768349837,0.314843125254717,0,0,0.464448369948228,4.59710612239464,6.32532429434325,9.98335827450327,0,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70763890732835,0,0,1.32171328579026,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.68280343881454,8.69465420536006,2.1686349143074,5.51471701699479,5.93870727739377,0.795285947051099,0.973269740605272,2.74150969775797,6.87361132133948,6.85111328406383,5.89405839739707,3.64295288292542,4.82019775619758,0,0,0,0,0,0,2.98143611050058,2.58070378531837,2.08284300964557,2.82653970962005,2.51699661725944,6.32771496462155,1.67195973229448,5.68516870172524,7.1153252537342,10.3763389957048,4.02829317109147,4.56163263431108,9.03029612928227,4.41195696415042,8.1014194788176,5.44728342532887,2.69435247151404,5.0675166217495,3.06633274931766,4.74632829784064,2.01521918323448,0,0,5.23312862571041,9.44246708221105,6.07826455989983,6.88527740228738,9.17877186396204,2.83734705758686,7.8494864019923,5.33744978648525,7.15335890409764,0.933633106199299,2.69421344139376,0.980771418680752,3.78393569112329,4.03323147135999,3.51482147750695,0,0,0.597794722207204,0.704606991862589,0,0,1.22492502752936,0.982674538494144,2.47981874821837,2.37600571456411,4.94533858557114,1.82032272387605,1.43723628363248,1.17835279767846,1.12606667884768,0.554128230968366,5.70670907145089,9.50112166976961,4.05642759047811,4.19699077692078,7.5343646989322,6.62027905337559,6.56988893594642,5.10154863343484,4.225153698776,8.75977836155139,4.09457083929498,7.08860595413318,5.55390929418832,7.32057945307932,6.44349290496095,1.45481451136931,7.81021103536552,4.13083602733325,3.89989362314122,8.31021668602176,6.54590689418003,11.4721838155602,16.3444766213658,11.5300898439692,14.0594670872117,10.4697665565524,13.6253259472839,13.1391849267299,3.12899064659632,1.28648187638577,0,2.3218396401599,0.721879481669586,17.9826336060563,20.0615781192941,17.8348162113777,19.9632090645633,19.1733910801317,16.1344020995546,12.5393116588953,14.716609884401,12.6966561792309,0,2.80483547606892,2.8810180793198,0,2.53510069643662,13.7595810334868,4.72631925345123,0,17.0953929574928,2.05881372358231,7.57276969319516,12.3641928583382,6.73544115157927,6.38860271593854,3.9096996637239,0,5.77325368101093,1.73895607462615,17.7287128296091,7.07395594029262,8.33373922637899,7.41991193714933,27.6571539285746,21.4621540523718,0,0,0,6.56136837907439,11.926731102119,9.78248170972467,19.6133164719238,14.2410629871841,10.3513323374607,0,0,0,0.144119953416961,0,0.571481048629521,0,1.17217447210047,1.71072446022705,1.95372236136315,1.20137223137567,0.571652865261156,4.70950554250515,3.92364061949952,3.9602674343313,10.9880958394111,0,0,5.85063856486715,10.4007436911366,1.54324424557285,0,0.532844358032199,6.57698770827479,1.08524321078289,0,1.30294473717494,8.88479871856365,0,8.44030255766841,5.22920075160176,11.5968669771186,0,0,0,7.42837052023906,9.18895486672911,0,2.89562613335158,2.05476322550383,1.25342674267927,0,0,0,0.128343036279748,1.52456774533478,5.20559415430487,0.773288812777695,1.17261385734044,0.637938751653163,0,0,0,0.613457458595699,0.500170521059677,1.35632511849868,19.1333192608343,9.99202337264106,16.874158408631,17.3369294189216,3.61135319673263,2.27407504055985,2.0694614258501,11.2918351751024,7.74350507875153,0.260650843404249,2.54541504701563,0.686286847621712,0,0,0,7.57818928615649,6.65741758041988,5.44302527993425,7.44323423456331,18.4154367945675,7.57782254969299,7.81648810459776,6.14048698880044,9.16867350518563,7.42090332224955,0.154209693802656,1.24293207719189,0.0821271560138091,0,0.232420756919918,13.7779772534449,12.4314011588037,34.9907757956406,1.7222167224691,3.27764102412091,1.18011973463482,12.6335891614075,15.0950060724653,10.980896768476,5.84556898613043,10.4496112603947,1.13733384070897,0.850468526382578,8.63663664408557,7.71136263451447,7.04460737614017,10.0337954770971,6.11703055308092,8.31076008928724,6.71624264166535,0,0,2.3080511260475,7.54433685109323,16.2689197332152,8.65544497840867,6.9592793261941,5.61064599459998,5.16838984196555,8.45078319847478,6.42735719376638,1.35339005608971,0.462145851343933,0.307007349452259,0.275673144969061,0.751941714077915,0.580066775656914,1.02271952899321,0.979352392114111,14.7103574671271,15.1830153218434,14.8030746493718,32.2693320929204,2.32422774648643,5.98143458978216,0.6970372701606,1.54016790088044,2.12922412126809,0.869932992075073,3.52116016297448,9.01686786474545,3.34942532423701,2.84741482246853,8.76898892049594,2.303080121802,4.2793898803392,0,3.13979456079692,1.97859703341646,0.274537029736055,0.824686816419805,2.02182481573316,3.17020642346017,2.10629228119491,1.95053495635836,1.21856744815642,1.05650146756755,1.63799893689583,2.12108147930569,0,1.65409603063837,4.64407282668854,3.06915619677634,0,0.655894752046633,3.24656603140326,1.8589409885985,1.97186921772569,1.14729081763241,2.45622602532803,3.21003946333125,0,2.53329162357197,0.329294892959902,0.75894634753143,0.699869440489966,10.1033218361788,2.68120910214315,16.3336477291984,9.0378048745708,2.58303223602738,0,3.10401107475673,7.3511488066227,0,0,0,0,0,0,0,0,5.02073134299124,0.962479855263359,14.9474531748429,0,0,1.42283686696828,0.478278818186467,0,0,0,0.649243880549111,1.40398589056729,0,0,7.51903431270201,0.169291777801603,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0.99921590399346,0,6.92419999510413,3.22317994398167,3.27673408723686,0,1.70481688083848,8.11731248108146,16.6300221266278,6.14321404198464,1.9882952955326,0.703347082052564,6.34459618630564,2.96646973608167,7.17826387635178,7.96991953004279,6.07824614168525,5.03865495708552,15.6471084228297,0.123084805461069,6.53183134089796,44.3050971156321,44.7552936689023,0,6.21453455512682,0,13.3364388173564,1.93866549219044,1.48428957058962,1.99613798001194,46.0957137120863,35.8585999984402,5.07499702804355,5.34829206941848,10.6786533122962,19.6201775867387,3.79217710565611,9.03974301488088,3.12524990879926,0,2.17073589525734,0,3.42795705786796,0,3.51016635446356,39.1089084033175,25.653968947263,11.388638258562,5.35527662480906,10.8365035062388,18.3105594595935,9.34367398529269,9.8890359516895,11.5412967686347,10.6606955203727,3.06579894587209,0,0,0,0,0,0,0.317873157960757,10.5499032264014,24.8113868401905,12.5804233576207,3.24582959613137,9.95261931078505,6.01511438622706,4.888241159469,0.296521128680622,0.247127877893006,0.208843899010911,1.34802265961354,3.21031058919516,0.702793337176017,0,15.6531695145672,0.971121518136371,13.4158696968793,2.41981432097328,1.83643656978294,3.34888872030986,31.2672712382144,8.50243169457427,6.64653872707185,4.30289542638149,3.7671950208867,7.16834578637753,24.1918114125324,0,8.50442717842141,19.6964718802899,26.6401172136032,6.81434006143918,7.73937146122274,11.320490760823,26.0928861997682,13.7953967849392,6.9832091871662,33.8903526495361,2.25980740780532,16.0339051836699,3.37814839895082,1.13959432720582,21.1195493353587,14.3484288250245,7.89776080535604,13.3872438420027,8.50133461209225,4.12331746197296,8.57974989309823,7.34679469739563,2.11229310461235,19.3269108385772,5.02845562472372,5.33474516192899,5.20190909945241,10.4022212364547,1.80126086612937,1.09524303113594,1.27746588066972,12.4631978011788,0,1.39641200636127,5.95817102430378,0,7.58780201896166,0.429226048136571,0.89268582976749,3.49354056930977,7.92659743793288,23.2991899054908,8.19345095995126,6.67568452887448,8.08842526250219,29.9219543804836,2.11683330164461,0.795229689809303,2.31545790389679,15.2715491041768,14.8542591525012,17.4484941972258,0.674921674654501,22.4402566821805,0.971992906528395,4.36065093879046,6.30445658393585,13.0611924456145,8.87042826763015,7.70935559131233,78.6852309009726,0.714695326373367,1.32418394073086,1.27134268827375,0.542999601753713,1.72844298240254,0.326587360109409,29.9325478906219,0.082092520749339,3.74853647927928,4.64579575232515,6.59485051551371,1.32506888912221,2.19781025814636,1.58679122091228,16.9375969505486,3.52407511158336,7.04796922946785,7.3886023396843,3.31391244277756,0.496166021811951,0,0.487170393523584,15.9585314442545,1.63205341010842,1.7548292581589,0.919036730290385,0.983617892129413,21.5164111862821,1.77213635993397,1.70836770862748,1.001527445652,1.72022758707021,2.44043913381075,1.30402446176905,13.5581662237506,16.9973354828465,1.21319294033318,0,4.70531639396343,3.74667924645505,5.36207805860053,0.447764408660622,1.40227985908335,0,0.378806010550178,1.50940741051545,0,3.20376095755693,0.907385542579434,1.39893480524502,1.62640664988597,1.43367090447332,1.34940933649081,2.48420731002015,0.829412415681711,2.39257543102195,5.21745061811734,4.20721305192212,7.61610424337591,2.84809513243263,2.36403256963327,3.86678005352958,4.17630383890644,9.15620544006817,1.60011105865261,2.06037423109676,2.02049693259551,3.78554694685953,3.65977677773876,22.9452502771171,46.1959896778424,31.0587117951813,23.8468148553549,20.0684097695303,21.1324832476155,20.9984984069461,16.2270196688243,9.71790302702346,20.8347161332588,10.6433737611436,13.0683174479853,37.9973375904318,11.2428183785631,1.24432592536558,0,0,0,20.9670303261704,14.9921474339769,33.1760033673044,0.39997479170986,2.3472180532711,0.172214979660816,18.7280264677056,0.368211900503681,23.6396368045861,13.6856997207254,0,0,10.0650202787774,0.327628914576042,2.7157204792644,3.18862380152524,0.743614585554013,9.49696360554514,13.0381783767902,0.47317047000752,10.4074197277111,3.52675943690684,10.718591707362,1.28458450192919,0,0.319267718114302,1.43581454968528,0.756215088665154,1.31398779682014,1.29180516505481,0,15.0166009306569,4.83675865725735,14.307430684691,42.3979194771741,3.4324388592045,6.21323933454091,3.38157577597667,8.64918776016458,25.0114285192365,0.781514011233092,76.7386614830568,25.8759629665953,20.9955642428204,1.35075169236789,0,1.03343398250592,0.634158101939068,0,4.93431990171464,2.97726707033577,5.62787981950786,22.3584248369292,9.64263304580916,16.8141861109412,4.85572483389305,6.14687916648504,19.6919261761058,0.460935950223117,3.42976018874837,0.883606528698812,1.05236437700559,11.3466087248609,5.56157009460346,8.55574712070603,1.09980912941201,27.7469441680651,3.65263488203798,8.63710364874486,0.9555033757741,4.86040500401263,4.42438112851634,8.48562405187314,1.21700790611806,0.801711364730253,5.59483643240199,4.4386804044427,17.2814915453523,6.88363774112444,2.48497201534187,4.34588364271704,15.6653208570644,11.6844502957466,1.86123831398592,1.91107787795487,15.9953267470843,20.3170983583553,8.04658304882978,0.647428837187895,0.923965261706223,2.3196288626764,4.37139893753226,5.84848658655264,4.57586782871147,0.356760272332706,48.5668152767528,12.0934568419972,21.1347980993343,6.01958433241968,2.18559560503957,5.64380755633827,7.84474629612498,11.0767977137764,1.57046773691956,0.297046400327086,2.113278637917,13.4242420603375,0.469919589899268,0.580120991762195,0,19.1052714308054,13.762899996912,34.6642704097207,5.11235471772562,4.58729283404541,1.86341458096887,0,0.883889372481891,1.30905207102113,3.7031878836078,2.60396512716726,3.69740502905135,1.29787968637137,17.1586337775707,3.93356059069304,3.4208595273088,8.77103935781043,18.7052183685892,24.5359381758036,5.51556586443225,6.21385325389563,4.28742608249886,2.48750831837634,1.55149493792843,4.90438158372256,8.80838396415839,0.581300188524055,2.54506328613017,14.801405860641,13.7477861880836,7.27621880249589,6.09606894111492,2.73786640868225,2.49202596153974,6.23983186916284,1.99596213927608,14.4897818127535,7.5776415573178,0,3.59300808426348,4.69281884806909,12.2241444182866,3.66206560484165,7.32332451604064,2.41528552309231,0.320568492303233 | |||
|short_description=p3@PAWR | |||
}} |
Latest revision as of 00:36, 25 September 2015
Short description: | p3@PAWR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PAWR_5end |
Coexpression cluster: | C1688_pancreatic_large_testicular_oral_extraskeletal_mesothelioma_small |
Association with transcript: | 26bp_to_NM_002583, uc001syx.2_5end |
EntrezGene: | PAWR |
HGNC: | 8614 |
UniProt: | Q96IZ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.38e-52 | 253 |
squamous epithelial cell | 1.31e-12 | 63 |
endodermal cell | 4.45e-12 | 58 |
embryonic cell | 1.09e-11 | 250 |
endo-epithelial cell | 6.49e-11 | 42 |
mesothelial cell | 4.89e-09 | 19 |
epithelial cell of alimentary canal | 9.11e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.59e-17 | 160 |
endoderm | 1.59e-17 | 160 |
presumptive endoderm | 1.59e-17 | 160 |
digestive system | 2.64e-15 | 145 |
digestive tract | 2.64e-15 | 145 |
primitive gut | 2.64e-15 | 145 |
subdivision of trunk | 3.88e-13 | 112 |
subdivision of digestive tract | 1.33e-12 | 118 |
endo-epithelium | 4.16e-11 | 82 |
respiratory system | 6.02e-10 | 74 |
foregut | 6.35e-10 | 87 |
trunk region element | 1.18e-09 | 101 |
primordium | 1.91e-09 | 160 |
respiratory primordium | 3.29e-09 | 38 |
endoderm of foregut | 3.29e-09 | 38 |
epithelial bud | 1.57e-08 | 37 |
respiratory tract | 1.81e-08 | 54 |
thoracic segment of trunk | 1.57e-07 | 52 |
reproductive structure | 4.61e-07 | 59 |
reproductive system | 4.61e-07 | 59 |
trunk | 4.83e-07 | 199 |
gland | 5.38e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.57e-32 | 106 |
cell type cancer | 6.49e-31 | 143 |
cancer | 7.43e-18 | 235 |
disease of cellular proliferation | 5.11e-17 | 239 |
adenocarcinoma | 2.96e-08 | 25 |
squamous cell carcinoma | 2.22e-07 | 14 |
disease of anatomical entity | 6.70e-07 | 39 |