FFCP PHASE1:Hg19::chr5:139493727..139493766,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:139493727..139493766,+
|short_description=p4@PURA
|description=CAGE_peak_4_at_PURA_5end
|association_with_transcript=19bp_to_ENST00000331327,NM_005859,uc00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5813 | |EntrezGene=5813 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9701 | |HGNC=9701 | ||
|TSSclassifier=strong | |||
|UniProt=Q00577 | |UniProt=Q00577 | ||
|association_with_transcript=19bp_to_ENST00000331327,NM_005859,uc003lfa.2_5end | |||
|cluster_id=chr5:139493727..139493766,+ | |||
|description=CAGE_peak_4_at_PURA_5end | |||
|id=chr5:139493727..139493766,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000084;4.61e-07;25 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.68e-27!115;UBERON:0001049!6.81e-13!57;UBERON:0005068!6.81e-13!57;UBERON:0006241!6.81e-13!57;UBERON:0007135!6.81e-13!57;UBERON:0002616!3.70e-10!59;UBERON:0002780!8.98e-10!41;UBERON:0001890!8.98e-10!41;UBERON:0006240!8.98e-10!41;UBERON:0003080!9.97e-10!42;UBERON:0000955!1.78e-08!69;UBERON:0006238!1.78e-08!69;UBERON:0003075!2.20e-07!86;UBERON:0007284!2.20e-07!86;UBERON:0001017!4.33e-07!82;UBERON:0002020!7.18e-07!34;UBERON:0003528!7.18e-07!34;UBERON:0001893!7.63e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.18e-07;53!UBERON:0002616;1.18e-07;53!UBERON:0007023;1.27e-07;114!UBERON:0002780;1.42e-07;41!UBERON:0001890;1.42e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.78e-27,114;UBERON:0001049,5.36e-13,56;UBERON:0005068,5.36e-13,56;UBERON:0006241,5.36e-13,56;UBERON:0007135,5.36e-13,56;UBERON:0000073,1.12e-11,53;UBERON:0002616,1.12e-11,53;UBERON:0002780,8.50e-10,41;UBERON:0001890,8.50e-10,41;UBERON:0003080,8.50e-10,41;UBERON:0006240,8.50e-10,41;UBERON:0000955,1.96e-08,68;UBERON:0006238,1.96e-08,68;UBERON:0003075,1.24e-07,82;UBERON:0007284,1.24e-07,82;UBERON:0001017,3.47e-07,81;UBERON:0003528,7.34e-07,34;UBERON:0002020,7.34e-07,34;UBERON:0001893,7.80e-07,34 | |||
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| ||
|short_description=p4@PURA | |||
}} | }} |
Latest revision as of 01:22, 25 September 2015
Short description: | p4@PURA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PURA_5end |
Coexpression cluster: | NA |
Association with transcript: | 19bp_to_ENST00000331327, NM_005859, uc003lfa.2_5end |
EntrezGene: | PURA |
HGNC: | 9701 |
UniProt: | Q00577 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.78e-27 | 114 |
neural tube | 5.36e-13 | 56 |
neural rod | 5.36e-13 | 56 |
future spinal cord | 5.36e-13 | 56 |
neural keel | 5.36e-13 | 56 |
regional part of nervous system | 1.12e-11 | 53 |
regional part of brain | 1.12e-11 | 53 |
regional part of forebrain | 8.50e-10 | 41 |
forebrain | 8.50e-10 | 41 |
anterior neural tube | 8.50e-10 | 41 |
future forebrain | 8.50e-10 | 41 |
brain | 1.96e-08 | 68 |
future brain | 1.96e-08 | 68 |
neural plate | 1.24e-07 | 82 |
presumptive neural plate | 1.24e-07 | 82 |
central nervous system | 3.47e-07 | 81 |
brain grey matter | 7.34e-07 | 34 |
gray matter | 7.34e-07 | 34 |
telencephalon | 7.80e-07 | 34 |